EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013612 (Gene tree)
Gene ID: 105030251
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 6474 bases
Position: chrAZJR03000966.1:156422-162895
Accession: 105030251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034898	THUMP	PF02926.17	5.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000022081	-	3516	XM_013132333	ENSELUP00000034898	422 (aa)	XP_012987787	-

Gene Model

Click here to download ENSELUG00000013612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013612	thumpd1	61	61.069	ENSG00000066654	THUMPD1	86	51.613	Homo_sapiens
ENSELUG00000013612	thumpd1	62	78.409	ENSAPOG00000008440	thumpd1	96	70.169	Acanthochromis_polyacanthus
ENSELUG00000013612	thumpd1	70	56.811	ENSAMEG00000006257	THUMPD1	82	55.667	Ailuropoda_melanoleuca
ENSELUG00000013612	thumpd1	61	76.953	ENSACIG00000024395	thumpd1	78	75.781	Amphilophus_citrinellus
ENSELUG00000013612	thumpd1	62	78.788	ENSAOCG00000003509	thumpd1	82	78.030	Amphiprion_ocellaris
ENSELUG00000013612	thumpd1	62	78.788	ENSAPEG00000010515	thumpd1	83	78.030	Amphiprion_percula
ENSELUG00000013612	thumpd1	71	70.432	ENSATEG00000004737	thumpd1	93	70.432	Anabas_testudineus
ENSELUG00000013612	thumpd1	55	66.383	ENSAPLG00000015259	THUMPD1	82	64.681	Anas_platyrhynchos
ENSELUG00000013612	thumpd1	61	60.595	ENSACAG00000009625	-	85	59.480	Anolis_carolinensis
ENSELUG00000013612	thumpd1	61	60.153	ENSANAG00000026882	-	74	59.770	Aotus_nancymaae
ENSELUG00000013612	thumpd1	61	48.855	ENSANAG00000027040	-	70	46.743	Aotus_nancymaae
ENSELUG00000013612	thumpd1	55	51.709	ENSANAG00000027311	-	66	51.709	Aotus_nancymaae
ENSELUG00000013612	thumpd1	63	75.655	ENSACLG00000004830	thumpd1	83	76.030	Astatotilapia_calliptera
ENSELUG00000013612	thumpd1	61	68.340	ENSAMXG00000012356	thumpd1	78	67.568	Astyanax_mexicanus
ENSELUG00000013612	thumpd1	61	62.069	ENSBTAG00000047673	THUMPD1	73	60.769	Bos_taurus
ENSELUG00000013612	thumpd1	60	61.719	ENSCJAG00000009499	THUMPD1	74	59.387	Callithrix_jacchus
ENSELUG00000013612	thumpd1	74	54.206	ENSCAFG00000017985	THUMPD1	89	52.960	Canis_familiaris
ENSELUG00000013612	thumpd1	74	54.206	ENSCAFG00020021861	THUMPD1	89	52.960	Canis_lupus_dingo
ENSELUG00000013612	thumpd1	61	60.618	ENSCHIG00000010134	THUMPD1	73	60.618	Capra_hircus
ENSELUG00000013612	thumpd1	71	55.128	ENSTSYG00000011537	THUMPD1	86	54.019	Carlito_syrichta
ENSELUG00000013612	thumpd1	60	61.811	ENSCPOG00000008919	-	73	60.769	Cavia_porcellus
ENSELUG00000013612	thumpd1	60	61.811	ENSCPOG00000023684	-	73	60.769	Cavia_porcellus
ENSELUG00000013612	thumpd1	61	56.705	ENSCCAG00000019379	-	65	55.172	Cebus_capucinus
ENSELUG00000013612	thumpd1	61	60.687	ENSCCAG00000030205	THUMPD1	74	59.387	Cebus_capucinus
ENSELUG00000013612	thumpd1	58	52.124	ENSCATG00000020844	-	72	50.775	Cercocebus_atys
ENSELUG00000013612	thumpd1	61	61.450	ENSCATG00000040309	THUMPD1	74	60.153	Cercocebus_atys
ENSELUG00000013612	thumpd1	61	60.769	ENSCLAG00000016508	THUMPD1	74	60.769	Chinchilla_lanigera
ENSELUG00000013612	thumpd1	61	61.450	ENSCSAG00000007610	THUMPD1	74	60.153	Chlorocebus_sabaeus
ENSELUG00000013612	thumpd1	59	47.674	ENSCSAG00000009860	-	57	46.304	Chlorocebus_sabaeus
ENSELUG00000013612	thumpd1	80	52.493	ENSCHOG00000005587	THUMPD1	93	52.819	Choloepus_hoffmanni
ENSELUG00000013612	thumpd1	69	59.736	ENSCPBG00000019055	THUMPD1	85	59.272	Chrysemys_picta_bellii
ENSELUG00000013612	thumpd1	61	31.159	ENSCING00000021274	-	93	31.159	Ciona_intestinalis
ENSELUG00000013612	thumpd1	52	57.534	ENSCANG00000038770	THUMPD1	57	66.474	Colobus_angolensis_palliatus
ENSELUG00000013612	thumpd1	53	56.951	ENSCANG00000035822	-	72	56.502	Colobus_angolensis_palliatus
ENSELUG00000013612	thumpd1	65	59.643	ENSCGRG00001014829	Thumpd1	81	56.463	Cricetulus_griseus_chok1gshd
ENSELUG00000013612	thumpd1	61	62.214	ENSCGRG00000000060	Thumpd1	74	60.920	Cricetulus_griseus_crigri
ENSELUG00000013612	thumpd1	65	74.035	ENSCSEG00000002041	thumpd1	91	74.035	Cynoglossus_semilaevis
ENSELUG00000013612	thumpd1	63	78.731	ENSCVAG00000014960	thumpd1	83	78.358	Cyprinodon_variegatus
ENSELUG00000013612	thumpd1	61	68.093	ENSDARG00000100264	thumpd1	73	68.627	Danio_rerio
ENSELUG00000013612	thumpd1	77	52.226	ENSDNOG00000043510	THUMPD1	94	52.226	Dasypus_novemcinctus
ENSELUG00000013612	thumpd1	61	62.738	ENSDORG00000028216	Thumpd1	74	61.217	Dipodomys_ordii
ENSELUG00000013612	thumpd1	58	37.079	FBgn0035532	CG15014	91	33.670	Drosophila_melanogaster
ENSELUG00000013612	thumpd1	60	56.471	ENSETEG00000002763	THUMPD1	61	55.985	Echinops_telfairi
ENSELUG00000013612	thumpd1	60	44.275	ENSEBUG00000011011	THUMPD1	71	44.275	Eptatretus_burgeri
ENSELUG00000013612	thumpd1	61	59.846	ENSECAG00000005354	THUMPD1	73	59.846	Equus_caballus
ENSELUG00000013612	thumpd1	61	61.686	ENSEEUG00000011256	THUMPD1	63	60.536	Erinaceus_europaeus
ENSELUG00000013612	thumpd1	61	61.303	ENSFCAG00000039296	THUMPD1	95	51.003	Felis_catus
ENSELUG00000013612	thumpd1	51	65.297	ENSFALG00000014029	THUMPD1	96	57.621	Ficedula_albicollis
ENSELUG00000013612	thumpd1	63	76.208	ENSFHEG00000013319	thumpd1	78	77.323	Fundulus_heteroclitus
ENSELUG00000013612	thumpd1	70	68.243	ENSGMOG00000003369	thumpd1	94	68.243	Gadus_morhua
ENSELUG00000013612	thumpd1	69	74.576	ENSGAFG00000011000	thumpd1	99	70.093	Gambusia_affinis
ENSELUG00000013612	thumpd1	63	76.404	ENSGACG00000019511	thumpd1	82	76.030	Gasterosteus_aculeatus
ENSELUG00000013612	thumpd1	70	59.283	ENSGAGG00000008225	THUMPD1	94	58.824	Gopherus_agassizii
ENSELUG00000013612	thumpd1	61	61.069	ENSGGOG00000005231	-	59	59.387	Gorilla_gorilla
ENSELUG00000013612	thumpd1	63	75.281	ENSHBUG00000017996	thumpd1	83	75.655	Haplochromis_burtoni
ENSELUG00000013612	thumpd1	60	61.417	ENSHGLG00000011001	-	72	61.417	Heterocephalus_glaber_female
ENSELUG00000013612	thumpd1	60	61.811	ENSHGLG00100016023	THUMPD1	72	61.811	Heterocephalus_glaber_male
ENSELUG00000013612	thumpd1	55	69.068	ENSHCOG00000008618	thumpd1	56	68.644	Hippocampus_comes
ENSELUG00000013612	thumpd1	84	54.494	ENSIPUG00000012500	thumpd1	87	54.372	Ictalurus_punctatus
ENSELUG00000013612	thumpd1	61	62.214	ENSSTOG00000007011	THUMPD1	74	60.920	Ictidomys_tridecemlineatus
ENSELUG00000013612	thumpd1	61	60.153	ENSJJAG00000004295	-	74	58.846	Jaculus_jaculus
ENSELUG00000013612	thumpd1	64	61.957	ENSKMAG00000009545	thumpd1	96	49.749	Kryptolebias_marmoratus
ENSELUG00000013612	thumpd1	62	76.806	ENSLBEG00000009349	thumpd1	81	75.665	Labrus_bergylta
ENSELUG00000013612	thumpd1	62	61.512	ENSLACG00000005833	THUMPD1	85	58.842	Latimeria_chalumnae
ENSELUG00000013612	thumpd1	64	67.528	ENSLOCG00000000854	thumpd1	86	68.266	Lepisosteus_oculatus
ENSELUG00000013612	thumpd1	61	61.923	ENSLAFG00000025838	THUMPD1	73	61.538	Loxodonta_africana
ENSELUG00000013612	thumpd1	61	61.450	ENSMFAG00000036996	THUMPD1	74	60.153	Macaca_fascicularis
ENSELUG00000013612	thumpd1	53	55.263	ENSMFAG00000041474	-	72	53.744	Macaca_fascicularis
ENSELUG00000013612	thumpd1	61	61.450	ENSMMUG00000004225	THUMPD1	74	60.153	Macaca_mulatta
ENSELUG00000013612	thumpd1	53	54.825	ENSMMUG00000038414	-	72	53.304	Macaca_mulatta
ENSELUG00000013612	thumpd1	59	52.734	ENSMNEG00000038856	-	81	51.373	Macaca_nemestrina
ENSELUG00000013612	thumpd1	61	61.450	ENSMNEG00000020726	THUMPD1	74	60.153	Macaca_nemestrina
ENSELUG00000013612	thumpd1	53	54.626	ENSMLEG00000030012	-	72	53.097	Mandrillus_leucophaeus
ENSELUG00000013612	thumpd1	61	61.450	ENSMLEG00000036436	THUMPD1	74	60.153	Mandrillus_leucophaeus
ENSELUG00000013612	thumpd1	63	75.849	ENSMAMG00000006858	thumpd1	81	75.094	Mastacembelus_armatus
ENSELUG00000013612	thumpd1	63	75.281	ENSMZEG00005013693	thumpd1	83	75.655	Maylandia_zebra
ENSELUG00000013612	thumpd1	61	61.450	ENSMAUG00000013306	Thumpd1	74	60.385	Mesocricetus_auratus
ENSELUG00000013612	thumpd1	61	61.832	ENSMICG00000038483	-	74	60.536	Microcebus_murinus
ENSELUG00000013612	thumpd1	61	61.832	ENSMOCG00000003447	Thumpd1	74	60.536	Microtus_ochrogaster
ENSELUG00000013612	thumpd1	61	76.426	ENSMMOG00000011323	thumpd1	78	74.905	Mola_mola
ENSELUG00000013612	thumpd1	65	60.357	ENSMODG00000006971	-	72	61.594	Monodelphis_domestica
ENSELUG00000013612	thumpd1	60	64.062	ENSMODG00000024776	-	73	61.957	Monodelphis_domestica
ENSELUG00000013612	thumpd1	63	75.564	ENSMALG00000019522	thumpd1	85	75.564	Monopterus_albus
ENSELUG00000013612	thumpd1	61	61.303	MGP_CAROLIEiJ_G0030382	Thumpd1	75	60.153	Mus_caroli
ENSELUG00000013612	thumpd1	61	62.069	ENSMUSG00000030942	Thumpd1	75	60.536	Mus_musculus
ENSELUG00000013612	thumpd1	61	62.214	MGP_PahariEiJ_G0013593	Thumpd1	96	51.136	Mus_pahari
ENSELUG00000013612	thumpd1	74	53.395	ENSMLUG00000010547	THUMPD1	94	51.320	Myotis_lucifugus
ENSELUG00000013612	thumpd1	80	53.623	ENSNGAG00000018643	Thumpd1	94	52.616	Nannospalax_galili
ENSELUG00000013612	thumpd1	62	76.336	ENSNBRG00000006987	thumpd1	77	76.336	Neolamprologus_brichardi
ENSELUG00000013612	thumpd1	61	61.069	ENSNLEG00000012369	THUMPD1	74	59.387	Nomascus_leucogenys
ENSELUG00000013612	thumpd1	65	51.835	ENSOPRG00000011342	THUMPD1	67	51.835	Ochotona_princeps
ENSELUG00000013612	thumpd1	61	59.387	ENSODEG00000012360	THUMPD1	74	59.160	Octodon_degus
ENSELUG00000013612	thumpd1	62	75.000	ENSONIG00000000146	thumpd1	93	75.758	Oreochromis_niloticus
ENSELUG00000013612	thumpd1	60	63.672	ENSOANG00000014297	THUMPD1	72	63.672	Ornithorhynchus_anatinus
ENSELUG00000013612	thumpd1	61	62.452	ENSOCUG00000009895	-	74	60.769	Oryctolagus_cuniculus
ENSELUG00000013612	thumpd1	62	74.905	ENSORLG00000027557	thumpd1	85	74.905	Oryzias_latipes
ENSELUG00000013612	thumpd1	66	71.228	ENSORLG00020010206	thumpd1	92	69.825	Oryzias_latipes_hni
ENSELUG00000013612	thumpd1	66	70.877	ENSORLG00015009581	thumpd1	94	68.836	Oryzias_latipes_hsok
ENSELUG00000013612	thumpd1	62	74.144	ENSOMEG00000019361	thumpd1	94	66.019	Oryzias_melastigma
ENSELUG00000013612	thumpd1	61	61.832	ENSOGAG00000026723	THUMPD1	74	60.536	Otolemur_garnettii
ENSELUG00000013612	thumpd1	61	62.452	ENSOARG00000013107	THUMPD1	72	61.154	Ovis_aries
ENSELUG00000013612	thumpd1	61	61.069	ENSPPAG00000033818	-	59	59.770	Pan_paniscus
ENSELUG00000013612	thumpd1	53	55.752	ENSPPAG00000001653	-	68	54.222	Pan_paniscus
ENSELUG00000013612	thumpd1	61	62.069	ENSPPRG00000014118	-	73	60.769	Panthera_pardus
ENSELUG00000013612	thumpd1	61	61.686	ENSPTIG00000013856	-	73	60.385	Panthera_tigris_altaica
ENSELUG00000013612	thumpd1	51	53.704	ENSPTRG00000046073	-	64	52.093	Pan_troglodytes
ENSELUG00000013612	thumpd1	61	61.069	ENSPTRG00000007848	THUMPD1	59	59.770	Pan_troglodytes
ENSELUG00000013612	thumpd1	61	61.450	ENSPANG00000025507	THUMPD1	74	60.153	Papio_anubis
ENSELUG00000013612	thumpd1	53	55.263	ENSPANG00000034881	-	72	53.744	Papio_anubis
ENSELUG00000013612	thumpd1	60	75.686	ENSPKIG00000014491	thumpd1	79	75.097	Paramormyrops_kingsleyae
ENSELUG00000013612	thumpd1	58	64.490	ENSPSIG00000012430	THUMPD1	82	64.490	Pelodiscus_sinensis
ENSELUG00000013612	thumpd1	60	78.378	ENSPMGG00000014479	thumpd1	90	76.654	Periophthalmus_magnuspinnatus
ENSELUG00000013612	thumpd1	54	38.095	ENSPEMG00000002608	-	93	38.528	Peromyscus_maniculatus_bairdii
ENSELUG00000013612	thumpd1	67	59.170	ENSPCIG00000029241	THUMPD1	57	58.966	Phascolarctos_cinereus
ENSELUG00000013612	thumpd1	72	70.126	ENSPFOG00000012649	thumpd1	99	70.126	Poecilia_formosa
ENSELUG00000013612	thumpd1	72	70.662	ENSPLAG00000000137	thumpd1	99	70.662	Poecilia_latipinna
ENSELUG00000013612	thumpd1	72	70.347	ENSPMEG00000007750	thumpd1	99	70.347	Poecilia_mexicana
ENSELUG00000013612	thumpd1	65	76.812	ENSPREG00000000144	thumpd1	92	76.812	Poecilia_reticulata
ENSELUG00000013612	thumpd1	61	61.832	ENSPCOG00000024663	THUMPD1	74	60.536	Propithecus_coquereli
ENSELUG00000013612	thumpd1	67	55.208	ENSPVAG00000005659	-	74	55.036	Pteropus_vampyrus
ENSELUG00000013612	thumpd1	63	75.281	ENSPNYG00000007061	thumpd1	82	75.655	Pundamilia_nyererei
ENSELUG00000013612	thumpd1	61	70.543	ENSPNAG00000024872	thumpd1	85	70.543	Pygocentrus_nattereri
ENSELUG00000013612	thumpd1	53	59.375	ENSRBIG00000040136	-	75	57.848	Rhinopithecus_bieti
ENSELUG00000013612	thumpd1	61	61.450	ENSRBIG00000040752	THUMPD1	74	60.153	Rhinopithecus_bieti
ENSELUG00000013612	thumpd1	61	61.450	ENSRROG00000042189	THUMPD1	74	60.153	Rhinopithecus_roxellana
ENSELUG00000013612	thumpd1	53	58.929	ENSRROG00000045699	-	75	57.399	Rhinopithecus_roxellana
ENSELUG00000013612	thumpd1	61	31.786	YGL232W	-	96	30.824	Saccharomyces_cerevisiae
ENSELUG00000013612	thumpd1	61	61.832	ENSSBOG00000034246	THUMPD1	74	60.536	Saimiri_boliviensis_boliviensis
ENSELUG00000013612	thumpd1	66	60.211	ENSSHAG00000003853	THUMPD1	78	58.657	Sarcophilus_harrisii
ENSELUG00000013612	thumpd1	68	59.310	ENSSFOG00015007512	thumpd1	93	57.556	Scleropages_formosus
ENSELUG00000013612	thumpd1	63	76.316	ENSSMAG00000000723	thumpd1	81	76.316	Scophthalmus_maximus
ENSELUG00000013612	thumpd1	63	76.030	ENSSDUG00000014502	thumpd1	83	76.779	Seriola_dumerili
ENSELUG00000013612	thumpd1	63	76.030	ENSSLDG00000007694	thumpd1	83	76.779	Seriola_lalandi_dorsalis
ENSELUG00000013612	thumpd1	70	56.721	ENSSPUG00000005096	THUMPD1	91	58.788	Sphenodon_punctatus
ENSELUG00000013612	thumpd1	67	75.261	ENSSPAG00000006993	thumpd1	89	74.913	Stegastes_partitus
ENSELUG00000013612	thumpd1	61	61.686	ENSSSCG00000024748	THUMPD1	73	61.686	Sus_scrofa
ENSELUG00000013612	thumpd1	55	67.234	ENSTGUG00000009247	THUMPD1	85	66.383	Taeniopygia_guttata
ENSELUG00000013612	thumpd1	62	77.947	ENSTRUG00000015656	thumpd1	82	78.327	Takifugu_rubripes
ENSELUG00000013612	thumpd1	62	76.316	ENSTNIG00000001584	thumpd1	88	76.316	Tetraodon_nigroviridis
ENSELUG00000013612	thumpd1	60	61.811	ENSTBEG00000005252	THUMPD1	64	61.417	Tupaia_belangeri
ENSELUG00000013612	thumpd1	61	62.069	ENSTTRG00000016435	THUMPD1	91	52.976	Tursiops_truncatus
ENSELUG00000013612	thumpd1	70	57.860	ENSVPAG00000003422	THUMPD1	84	57.047	Vicugna_pacos
ENSELUG00000013612	thumpd1	74	53.251	ENSVVUG00000023241	THUMPD1	89	52.174	Vulpes_vulpes
ENSELUG00000013612	thumpd1	63	79.478	ENSXMAG00000026052	thumpd1	92	74.658	Xiphophorus_maculatus