EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013624 (Gene tree)
Gene ID: 105018969
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11864 bases
Position: chrLG20:25830255-25842118
Accession: 105018969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034882	PRP3	PF08572.10	5.8e-51	1	1
ENSELUP00000034882	PWI	PF01480.17	5.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000038534	-	1938	XM_020041516	ENSELUP00000034882	645 (aa)	XP_019897075	-

Gene Model

Click here to download ENSELUG00000013624's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013624	prpf3	99	66.334	ENSG00000117360	PRPF3	100	65.906	Homo_sapiens
ENSELUG00000013624	prpf3	100	76.170	ENSAPOG00000015584	prpf3	100	75.887	Acanthochromis_polyacanthus
ENSELUG00000013624	prpf3	99	66.334	ENSAMEG00000001630	PRPF3	100	65.906	Ailuropoda_melanoleuca
ENSELUG00000013624	prpf3	100	76.034	ENSACIG00000007876	prpf3	100	74.893	Amphilophus_citrinellus
ENSELUG00000013624	prpf3	100	76.204	ENSAOCG00000011449	prpf3	100	75.779	Amphiprion_ocellaris
ENSELUG00000013624	prpf3	100	75.852	ENSATEG00000023583	prpf3	100	75.568	Anabas_testudineus
ENSELUG00000013624	prpf3	99	66.952	ENSAPLG00000002440	PRPF3	100	66.524	Anas_platyrhynchos
ENSELUG00000013624	prpf3	99	65.434	ENSACAG00000003176	PRPF3	100	65.625	Anolis_carolinensis
ENSELUG00000013624	prpf3	99	66.334	ENSANAG00000026138	PRPF3	100	65.906	Aotus_nancymaae
ENSELUG00000013624	prpf3	100	77.168	ENSACLG00000020127	prpf3	100	76.657	Astatotilapia_calliptera
ENSELUG00000013624	prpf3	100	74.402	ENSAMXG00000007306	prpf3	100	74.543	Astyanax_mexicanus
ENSELUG00000013624	prpf3	99	66.334	ENSBTAG00000013946	PRPF3	100	65.906	Bos_taurus
ENSELUG00000013624	prpf3	80	37.431	WBGene00010844	prp-3	95	34.215	Caenorhabditis_elegans
ENSELUG00000013624	prpf3	99	66.334	ENSCJAG00000009926	PRPF3	100	65.906	Callithrix_jacchus
ENSELUG00000013624	prpf3	99	66.334	ENSCAFG00000011820	PRPF3	100	65.906	Canis_familiaris
ENSELUG00000013624	prpf3	79	63.894	ENSCAFG00020019653	PRPF3	100	62.655	Canis_lupus_dingo
ENSELUG00000013624	prpf3	99	66.334	ENSCHIG00000015434	PRPF3	100	65.906	Capra_hircus
ENSELUG00000013624	prpf3	99	66.476	ENSTSYG00000001383	PRPF3	100	66.049	Carlito_syrichta
ENSELUG00000013624	prpf3	93	56.897	ENSCAPG00000017812	PRPF3	95	57.031	Cavia_aperea
ENSELUG00000013624	prpf3	99	66.334	ENSCPOG00000008068	PRPF3	100	65.906	Cavia_porcellus
ENSELUG00000013624	prpf3	99	66.334	ENSCCAG00000026380	PRPF3	100	65.906	Cebus_capucinus
ENSELUG00000013624	prpf3	99	59.733	ENSCATG00000041778	PRPF3	100	59.644	Cercocebus_atys
ENSELUG00000013624	prpf3	99	66.476	ENSCLAG00000015009	PRPF3	100	66.049	Chinchilla_lanigera
ENSELUG00000013624	prpf3	82	82.545	ENSCHOG00000011645	PRPF3	76	84.000	Choloepus_hoffmanni
ENSELUG00000013624	prpf3	99	67.094	ENSCPBG00000008216	PRPF3	100	66.667	Chrysemys_picta_bellii
ENSELUG00000013624	prpf3	56	50.120	ENSCING00000003312	-	100	50.120	Ciona_intestinalis
ENSELUG00000013624	prpf3	83	47.119	ENSCSAVG00000008720	-	94	47.965	Ciona_savignyi
ENSELUG00000013624	prpf3	99	65.763	ENSCANG00000036769	PRPF3	100	65.335	Colobus_angolensis_palliatus
ENSELUG00000013624	prpf3	99	66.334	ENSCGRG00001019100	Prpf3	100	65.906	Cricetulus_griseus_chok1gshd
ENSELUG00000013624	prpf3	99	66.334	ENSCGRG00000007322	Prpf3	100	65.906	Cricetulus_griseus_crigri
ENSELUG00000013624	prpf3	100	73.558	ENSCSEG00000002532	prpf3	100	73.840	Cynoglossus_semilaevis
ENSELUG00000013624	prpf3	100	75.284	ENSCVAG00000009318	prpf3	100	74.716	Cyprinodon_variegatus
ENSELUG00000013624	prpf3	100	74.153	ENSDARG00000086425	prpf3	100	80.000	Danio_rerio
ENSELUG00000013624	prpf3	99	62.321	ENSDNOG00000005904	PRPF3	100	62.464	Dasypus_novemcinctus
ENSELUG00000013624	prpf3	92	65.491	ENSDORG00000008664	Prpf3	99	65.438	Dipodomys_ordii
ENSELUG00000013624	prpf3	80	45.629	FBgn0036915	Prp3	99	46.277	Drosophila_melanogaster
ENSELUG00000013624	prpf3	99	65.763	ENSETEG00000019124	PRPF3	100	65.193	Echinops_telfairi
ENSELUG00000013624	prpf3	100	54.595	ENSEBUG00000011680	prpf3	100	54.459	Eptatretus_burgeri
ENSELUG00000013624	prpf3	99	66.191	ENSEASG00005001566	PRPF3	100	65.763	Equus_asinus_asinus
ENSELUG00000013624	prpf3	99	66.334	ENSECAG00000019840	PRPF3	100	65.906	Equus_caballus
ENSELUG00000013624	prpf3	82	63.636	ENSEEUG00000007338	PRPF3	85	64.336	Erinaceus_europaeus
ENSELUG00000013624	prpf3	99	66.334	ENSFCAG00000013940	PRPF3	100	65.906	Felis_catus
ENSELUG00000013624	prpf3	99	66.049	ENSFDAG00000010365	PRPF3	100	65.621	Fukomys_damarensis
ENSELUG00000013624	prpf3	100	75.718	ENSFHEG00000021746	prpf3	100	75.287	Fundulus_heteroclitus
ENSELUG00000013624	prpf3	100	73.938	ENSGMOG00000008535	prpf3	100	73.654	Gadus_morhua
ENSELUG00000013624	prpf3	99	67.094	ENSGALG00000028205	PRPF3	100	66.667	Gallus_gallus
ENSELUG00000013624	prpf3	100	73.438	ENSGAFG00000012671	prpf3	100	73.438	Gambusia_affinis
ENSELUG00000013624	prpf3	100	75.779	ENSGACG00000011792	prpf3	100	75.496	Gasterosteus_aculeatus
ENSELUG00000013624	prpf3	99	67.094	ENSGAGG00000013765	PRPF3	100	67.845	Gopherus_agassizii
ENSELUG00000013624	prpf3	87	76.061	ENSGGOG00000013174	PRPF3	99	77.273	Gorilla_gorilla
ENSELUG00000013624	prpf3	100	76.102	ENSHBUG00000003493	prpf3	100	76.143	Haplochromis_burtoni
ENSELUG00000013624	prpf3	99	54.671	ENSHGLG00000016033	-	100	54.434	Heterocephalus_glaber_female
ENSELUG00000013624	prpf3	99	66.191	ENSHGLG00000016569	PRPF3	100	65.763	Heterocephalus_glaber_female
ENSELUG00000013624	prpf3	99	55.046	ENSHGLG00100008951	-	100	54.128	Heterocephalus_glaber_male
ENSELUG00000013624	prpf3	99	66.191	ENSHGLG00100007590	PRPF3	100	65.763	Heterocephalus_glaber_male
ENSELUG00000013624	prpf3	100	68.776	ENSHCOG00000014058	prpf3	100	68.644	Hippocampus_comes
ENSELUG00000013624	prpf3	100	74.610	ENSIPUG00000000902	PRPF3	100	74.644	Ictalurus_punctatus
ENSELUG00000013624	prpf3	99	66.334	ENSSTOG00000001889	PRPF3	100	65.906	Ictidomys_tridecemlineatus
ENSELUG00000013624	prpf3	100	74.006	ENSKMAG00000001390	prpf3	100	74.148	Kryptolebias_marmoratus
ENSELUG00000013624	prpf3	100	76.771	ENSLBEG00000026310	prpf3	100	76.771	Labrus_bergylta
ENSELUG00000013624	prpf3	92	60.736	ENSLACG00000010541	PRPF3	100	61.043	Latimeria_chalumnae
ENSELUG00000013624	prpf3	99	66.334	ENSLAFG00000004713	PRPF3	100	65.906	Loxodonta_africana
ENSELUG00000013624	prpf3	99	66.334	ENSMFAG00000039791	PRPF3	100	65.906	Macaca_fascicularis
ENSELUG00000013624	prpf3	89	65.550	ENSMMUG00000016301	PRPF3	97	64.434	Macaca_mulatta
ENSELUG00000013624	prpf3	99	66.334	ENSMNEG00000038161	PRPF3	100	65.906	Macaca_nemestrina
ENSELUG00000013624	prpf3	87	76.061	ENSMLEG00000040609	PRPF3	99	77.273	Mandrillus_leucophaeus
ENSELUG00000013624	prpf3	98	50.459	ENSMLEG00000041065	-	97	49.466	Mandrillus_leucophaeus
ENSELUG00000013624	prpf3	100	74.929	ENSMAMG00000014968	prpf3	100	74.610	Mastacembelus_armatus
ENSELUG00000013624	prpf3	100	76.062	ENSMZEG00005015970	prpf3	100	75.637	Maylandia_zebra
ENSELUG00000013624	prpf3	99	67.094	ENSMGAG00000000707	PRPF3	100	66.667	Meleagris_gallopavo
ENSELUG00000013624	prpf3	99	66.191	ENSMAUG00000017112	Prpf3	100	65.906	Mesocricetus_auratus
ENSELUG00000013624	prpf3	99	66.334	ENSMICG00000015386	PRPF3	100	66.844	Microcebus_murinus
ENSELUG00000013624	prpf3	99	66.334	ENSMOCG00000000242	Prpf3	100	65.906	Microtus_ochrogaster
ENSELUG00000013624	prpf3	100	71.510	ENSMMOG00000016131	prpf3	100	71.674	Mola_mola
ENSELUG00000013624	prpf3	99	66.334	ENSMODG00000018774	PRPF3	100	65.906	Monodelphis_domestica
ENSELUG00000013624	prpf3	100	73.267	ENSMALG00000007257	prpf3	100	73.542	Monopterus_albus
ENSELUG00000013624	prpf3	99	66.334	MGP_CAROLIEiJ_G0025354	Prpf3	100	65.906	Mus_caroli
ENSELUG00000013624	prpf3	99	66.334	ENSMUSG00000015748	Prpf3	100	65.906	Mus_musculus
ENSELUG00000013624	prpf3	99	66.382	MGP_PahariEiJ_G0026798	Prpf3	100	66.239	Mus_pahari
ENSELUG00000013624	prpf3	99	66.334	MGP_SPRETEiJ_G0026298	Prpf3	100	65.906	Mus_spretus
ENSELUG00000013624	prpf3	99	64.479	ENSMPUG00000005080	PRPF3	100	64.387	Mustela_putorius_furo
ENSELUG00000013624	prpf3	99	66.097	ENSMLUG00000004646	-	100	65.670	Myotis_lucifugus
ENSELUG00000013624	prpf3	99	66.334	ENSNGAG00000000910	Prpf3	100	65.906	Nannospalax_galili
ENSELUG00000013624	prpf3	100	75.490	ENSNBRG00000003462	prpf3	100	74.790	Neolamprologus_brichardi
ENSELUG00000013624	prpf3	89	65.550	ENSNLEG00000009841	PRPF3	99	64.434	Nomascus_leucogenys
ENSELUG00000013624	prpf3	85	64.198	ENSMEUG00000008733	PRPF3	88	62.424	Notamacropus_eugenii
ENSELUG00000013624	prpf3	99	65.763	ENSOPRG00000010139	PRPF3	100	65.621	Ochotona_princeps
ENSELUG00000013624	prpf3	99	51.841	ENSODEG00000014412	-	100	52.059	Octodon_degus
ENSELUG00000013624	prpf3	99	66.334	ENSODEG00000011363	-	100	66.524	Octodon_degus
ENSELUG00000013624	prpf3	100	76.062	ENSONIG00000006394	prpf3	100	75.637	Oreochromis_niloticus
ENSELUG00000013624	prpf3	99	50.287	ENSOANG00000015441	PRPF3	100	50.144	Ornithorhynchus_anatinus
ENSELUG00000013624	prpf3	99	66.334	ENSOCUG00000011760	PRPF3	100	65.906	Oryctolagus_cuniculus
ENSELUG00000013624	prpf3	100	74.468	ENSORLG00000010330	prpf3	100	74.148	Oryzias_latipes
ENSELUG00000013624	prpf3	100	74.468	ENSORLG00020009054	prpf3	100	74.148	Oryzias_latipes_hni
ENSELUG00000013624	prpf3	100	74.468	ENSORLG00015015016	prpf3	100	74.148	Oryzias_latipes_hsok
ENSELUG00000013624	prpf3	100	74.646	ENSOMEG00000000940	prpf3	100	74.432	Oryzias_melastigma
ENSELUG00000013624	prpf3	99	63.662	ENSOGAG00000005352	PRPF3	100	63.233	Otolemur_garnettii
ENSELUG00000013624	prpf3	99	66.334	ENSOARG00000020798	PRPF3	100	65.906	Ovis_aries
ENSELUG00000013624	prpf3	98	53.582	ENSPPAG00000043769	-	99	52.239	Pan_paniscus
ENSELUG00000013624	prpf3	99	66.191	ENSPPAG00000030983	PRPF3	100	65.763	Pan_paniscus
ENSELUG00000013624	prpf3	99	66.334	ENSPPRG00000000731	PRPF3	100	65.906	Panthera_pardus
ENSELUG00000013624	prpf3	99	66.334	ENSPTIG00000005516	PRPF3	100	65.906	Panthera_tigris_altaica
ENSELUG00000013624	prpf3	99	66.334	ENSPTRG00000001254	PRPF3	100	65.906	Pan_troglodytes
ENSELUG00000013624	prpf3	98	54.148	ENSPTRG00000047819	-	99	52.790	Pan_troglodytes
ENSELUG00000013624	prpf3	99	66.191	ENSPANG00000000499	PRPF3	100	65.763	Papio_anubis
ENSELUG00000013624	prpf3	100	75.035	ENSPKIG00000010501	prpf3	100	75.319	Paramormyrops_kingsleyae
ENSELUG00000013624	prpf3	99	67.618	ENSPSIG00000014877	PRPF3	100	66.619	Pelodiscus_sinensis
ENSELUG00000013624	prpf3	100	65.362	ENSPMGG00000007776	prpf3	100	65.362	Periophthalmus_magnuspinnatus
ENSELUG00000013624	prpf3	99	66.334	ENSPEMG00000011672	Prpf3	100	65.906	Peromyscus_maniculatus_bairdii
ENSELUG00000013624	prpf3	59	62.100	ENSPMAG00000005588	prpf3	99	61.454	Petromyzon_marinus
ENSELUG00000013624	prpf3	99	66.334	ENSPCIG00000008795	PRPF3	100	65.906	Phascolarctos_cinereus
ENSELUG00000013624	prpf3	100	73.034	ENSPFOG00000013638	prpf3	100	73.202	Poecilia_formosa
ENSELUG00000013624	prpf3	100	73.580	ENSPLAG00000018103	prpf3	100	73.722	Poecilia_latipinna
ENSELUG00000013624	prpf3	100	73.295	ENSPMEG00000023546	prpf3	100	73.438	Poecilia_mexicana
ENSELUG00000013624	prpf3	100	73.722	ENSPREG00000017216	prpf3	100	73.722	Poecilia_reticulata
ENSELUG00000013624	prpf3	74	56.629	ENSPPYG00000018646	-	99	55.431	Pongo_abelii
ENSELUG00000013624	prpf3	92	64.319	ENSPPYG00000000900	PRPF3	99	63.859	Pongo_abelii
ENSELUG00000013624	prpf3	85	66.997	ENSPCAG00000014908	PRPF3	86	66.502	Procavia_capensis
ENSELUG00000013624	prpf3	99	66.334	ENSPCOG00000013828	PRPF3	100	65.906	Propithecus_coquereli
ENSELUG00000013624	prpf3	99	65.335	ENSPVAG00000013472	PRPF3	100	65.193	Pteropus_vampyrus
ENSELUG00000013624	prpf3	100	76.102	ENSPNYG00000004279	prpf3	100	76.143	Pundamilia_nyererei
ENSELUG00000013624	prpf3	100	74.402	ENSPNAG00000001799	prpf3	100	74.402	Pygocentrus_nattereri
ENSELUG00000013624	prpf3	99	66.476	ENSRNOG00000025629	Prpf3	100	66.049	Rattus_norvegicus
ENSELUG00000013624	prpf3	82	73.759	ENSRBIG00000028854	PRPF3	98	76.596	Rhinopithecus_bieti
ENSELUG00000013624	prpf3	99	66.334	ENSRROG00000027464	PRPF3	100	65.906	Rhinopithecus_roxellana
ENSELUG00000013624	prpf3	99	60.200	ENSSBOG00000033104	PRPF3	100	60.057	Saimiri_boliviensis_boliviensis
ENSELUG00000013624	prpf3	99	66.097	ENSSHAG00000009548	PRPF3	100	65.670	Sarcophilus_harrisii
ENSELUG00000013624	prpf3	100	75.419	ENSSFOG00015022014	prpf3	100	75.105	Scleropages_formosus
ENSELUG00000013624	prpf3	100	75.456	ENSSMAG00000015739	prpf3	100	74.895	Scophthalmus_maximus
ENSELUG00000013624	prpf3	100	74.487	ENSSDUG00000006840	prpf3	100	74.927	Seriola_dumerili
ENSELUG00000013624	prpf3	100	76.050	ENSSLDG00000015423	prpf3	100	75.480	Seriola_lalandi_dorsalis
ENSELUG00000013624	prpf3	99	66.334	ENSSARG00000011064	PRPF3	100	65.906	Sorex_araneus
ENSELUG00000013624	prpf3	99	65.871	ENSSPUG00000000809	PRPF3	100	65.919	Sphenodon_punctatus
ENSELUG00000013624	prpf3	100	76.771	ENSSPAG00000018721	prpf3	100	76.629	Stegastes_partitus
ENSELUG00000013624	prpf3	99	66.334	ENSSSCG00000030119	PRPF3	100	66.844	Sus_scrofa
ENSELUG00000013624	prpf3	99	57.775	ENSTGUG00000004552	PRPF3	100	57.061	Taeniopygia_guttata
ENSELUG00000013624	prpf3	100	73.188	ENSTRUG00000014923	prpf3	100	73.043	Takifugu_rubripes
ENSELUG00000013624	prpf3	99	72.230	ENSTNIG00000008058	prpf3	100	71.950	Tetraodon_nigroviridis
ENSELUG00000013624	prpf3	78	65.574	ENSTBEG00000014072	PRPF3	87	65.789	Tupaia_belangeri
ENSELUG00000013624	prpf3	99	61.198	ENSTTRG00000010616	PRPF3	100	61.056	Tursiops_truncatus
ENSELUG00000013624	prpf3	79	67.199	ENSUAMG00000009345	PRPF3	100	66.844	Ursus_americanus
ENSELUG00000013624	prpf3	99	66.334	ENSUMAG00000003720	PRPF3	100	65.906	Ursus_maritimus
ENSELUG00000013624	prpf3	86	67.836	ENSVPAG00000005425	PRPF3	88	69.512	Vicugna_pacos
ENSELUG00000013624	prpf3	99	66.334	ENSVVUG00000007933	PRPF3	100	65.906	Vulpes_vulpes
ENSELUG00000013624	prpf3	99	64.773	ENSXETG00000018654	prpf3	100	64.672	Xenopus_tropicalis
ENSELUG00000013624	prpf3	100	73.722	ENSXMAG00000016347	prpf3	100	73.864	Xiphophorus_maculatus