EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013652 (Gene tree)
Gene ID: 105009029
Gene Symbol: sar1a
Alias: SAR1B
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5842 bases
Position: chrLG06:25744310-25750151
Accession: 105009029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013522	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000022071	-	4164	XM_010868434	ENSELUP00000013522	198 (aa)	XP_010866736	UPI000576EDBE

Gene Model

Click here to download ENSELUG00000013652's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013652	sar1a	64	34.815	ENSELUG00000023460	-	66	34.815
ENSELUG00000013652	sar1a	64	36.154	ENSELUG00000000269	ARL6	93	30.270
ENSELUG00000013652	sar1a	66	34.815	ENSELUG00000015699	arl4ca	71	34.815
ENSELUG00000013652	sar1a	91	30.387	ENSELUG00000007225	-	93	30.387
ENSELUG00000013652	sar1a	73	35.417	ENSELUG00000016704	arl2	79	35.172
ENSELUG00000013652	sar1a	96	32.653	ENSELUG00000003904	arl3l1	95	32.653
ENSELUG00000013652	sar1a	64	34.351	ENSELUG00000011113	-	58	34.351
ENSELUG00000013652	sar1a	72	32.394	ENSELUG00000008395	ARF3	78	32.394
ENSELUG00000013652	sar1a	95	30.052	ENSELUG00000016208	arl3l2	89	30.052
ENSELUG00000013652	sar1a	64	32.812	ENSELUG00000010736	arl8a	60	32.812
ENSELUG00000013652	sar1a	72	33.784	ENSELUG00000004400	arl4cb	74	33.784
ENSELUG00000013652	sar1a	87	30.814	ENSELUG00000019582	-	89	30.814
ENSELUG00000013652	sar1a	85	30.000	ENSELUG00000000140	arl11	89	30.000
ENSELUG00000013652	sar1a	100	85.859	ENSELUG00000024279	sar1ab	100	85.859
ENSELUG00000013652	sar1a	100	86.364	ENSELUG00000020912	sar1b	100	86.364
ENSELUG00000013652	sar1a	56	35.135	ENSELUG00000018031	arl3	52	35.135
ENSELUG00000013652	sar1a	93	30.319	ENSELUG00000013130	-	97	30.319
ENSELUG00000013652	sar1a	61	38.211	ENSELUG00000000436	-	75	38.211
ENSELUG00000013652	sar1a	87	30.814	ENSELUG00000014428	arf4	89	30.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013652	sar1a	100	81.313	ENSACIG00000019827	sar1ab	100	81.313	Amphilophus_citrinellus
ENSELUG00000013652	sar1a	100	82.828	ENSAOCG00000022062	sar1ab	100	82.828	Amphiprion_ocellaris
ENSELUG00000013652	sar1a	100	82.828	ENSAPEG00000011525	sar1ab	100	82.828	Amphiprion_percula
ENSELUG00000013652	sar1a	100	84.848	ENSATEG00000003466	sar1ab	100	84.848	Anabas_testudineus
ENSELUG00000013652	sar1a	100	78.788	ENSACLG00000013053	sar1ab	100	78.788	Astatotilapia_calliptera
ENSELUG00000013652	sar1a	100	82.828	ENSCSEG00000004825	sar1ab	100	82.828	Cynoglossus_semilaevis
ENSELUG00000013652	sar1a	100	86.869	ENSCVAG00000006500	-	100	86.869	Cyprinodon_variegatus
ENSELUG00000013652	sar1a	100	82.323	ENSCVAG00000015162	sar1ab	100	82.323	Cyprinodon_variegatus
ENSELUG00000013652	sar1a	100	85.354	ENSDARG00000033320	sar1ab	100	85.354	Danio_rerio
ENSELUG00000013652	sar1a	100	80.303	ENSFHEG00000021773	sar1ab	100	80.303	Fundulus_heteroclitus
ENSELUG00000013652	sar1a	100	88.384	ENSFHEG00000012352	-	100	88.384	Fundulus_heteroclitus
ENSELUG00000013652	sar1a	100	82.323	ENSGMOG00000012588	sar1ab	100	82.323	Gadus_morhua
ENSELUG00000013652	sar1a	100	88.384	ENSGAFG00000004846	-	100	88.384	Gambusia_affinis
ENSELUG00000013652	sar1a	100	81.818	ENSGAFG00000009702	sar1ab	100	81.818	Gambusia_affinis
ENSELUG00000013652	sar1a	100	84.848	ENSGACG00000008616	sar1ab	100	84.848	Gasterosteus_aculeatus
ENSELUG00000013652	sar1a	100	78.788	ENSHBUG00000021221	sar1ab	100	78.788	Haplochromis_burtoni
ENSELUG00000013652	sar1a	100	82.828	ENSHCOG00000002845	sar1ab	80	82.828	Hippocampus_comes
ENSELUG00000013652	sar1a	100	81.818	ENSKMAG00000018006	sar1ab	100	81.818	Kryptolebias_marmoratus
ENSELUG00000013652	sar1a	100	84.343	ENSLBEG00000001114	sar1ab	100	84.343	Labrus_bergylta
ENSELUG00000013652	sar1a	100	84.343	ENSMAMG00000021314	sar1ab	100	84.343	Mastacembelus_armatus
ENSELUG00000013652	sar1a	100	78.788	ENSMZEG00005027606	sar1ab	100	78.788	Maylandia_zebra
ENSELUG00000013652	sar1a	100	84.343	ENSMMOG00000010360	sar1ab	100	84.343	Mola_mola
ENSELUG00000013652	sar1a	100	83.333	ENSMALG00000005831	sar1ab	100	83.333	Monopterus_albus
ENSELUG00000013652	sar1a	100	79.293	ENSNBRG00000018772	sar1ab	100	79.293	Neolamprologus_brichardi
ENSELUG00000013652	sar1a	100	80.303	ENSONIG00000018509	sar1ab	100	80.303	Oreochromis_niloticus
ENSELUG00000013652	sar1a	100	90.909	ENSORLG00000009132	-	90	90.909	Oryzias_latipes
ENSELUG00000013652	sar1a	100	83.838	ENSORLG00000006779	sar1ab	67	83.838	Oryzias_latipes
ENSELUG00000013652	sar1a	100	90.909	ENSORLG00020007024	-	90	90.909	Oryzias_latipes_hni
ENSELUG00000013652	sar1a	100	84.343	ENSORLG00020005458	sar1ab	100	84.343	Oryzias_latipes_hni
ENSELUG00000013652	sar1a	100	83.838	ENSORLG00015010542	sar1ab	100	83.838	Oryzias_latipes_hsok
ENSELUG00000013652	sar1a	100	90.404	ENSORLG00015006223	-	94	95.536	Oryzias_latipes_hsok
ENSELUG00000013652	sar1a	100	90.404	ENSOMEG00000012020	-	100	90.404	Oryzias_melastigma
ENSELUG00000013652	sar1a	100	84.343	ENSOMEG00000004948	sar1ab	100	84.343	Oryzias_melastigma
ENSELUG00000013652	sar1a	100	87.374	ENSPKIG00000007615	sar1ab	100	87.374	Paramormyrops_kingsleyae
ENSELUG00000013652	sar1a	100	84.343	ENSPMGG00000013330	sar1ab	100	84.343	Periophthalmus_magnuspinnatus
ENSELUG00000013652	sar1a	100	82.828	ENSPFOG00000023432	sar1ab	100	82.828	Poecilia_formosa
ENSELUG00000013652	sar1a	100	82.828	ENSPLAG00000023705	sar1ab	100	82.828	Poecilia_latipinna
ENSELUG00000013652	sar1a	100	82.828	ENSPMEG00000000559	sar1ab	100	82.828	Poecilia_mexicana
ENSELUG00000013652	sar1a	100	87.374	ENSPMEG00000001717	-	100	87.374	Poecilia_mexicana
ENSELUG00000013652	sar1a	100	82.828	ENSPREG00000016098	sar1ab	100	82.828	Poecilia_reticulata
ENSELUG00000013652	sar1a	100	79.293	ENSPNYG00000011603	sar1ab	100	79.293	Pundamilia_nyererei
ENSELUG00000013652	sar1a	100	85.354	ENSPNAG00000008007	sar1ab	100	85.354	Pygocentrus_nattereri
ENSELUG00000013652	sar1a	100	90.404	ENSSFOG00015014010	sar1a	100	90.404	Scleropages_formosus
ENSELUG00000013652	sar1a	56	89.189	ENSSMAG00000020758	sar1ab	80	89.189	Scophthalmus_maximus
ENSELUG00000013652	sar1a	100	84.848	ENSSDUG00000010773	sar1ab	100	84.848	Seriola_dumerili
ENSELUG00000013652	sar1a	100	84.848	ENSSLDG00000025558	sar1ab	100	84.848	Seriola_lalandi_dorsalis
ENSELUG00000013652	sar1a	100	82.828	ENSSPAG00000009194	sar1ab	100	82.828	Stegastes_partitus
ENSELUG00000013652	sar1a	100	80.808	ENSTRUG00000007269	sar1ab	100	80.808	Takifugu_rubripes
ENSELUG00000013652	sar1a	100	80.808	ENSTNIG00000008635	sar1ab	100	80.808	Tetraodon_nigroviridis
ENSELUG00000013652	sar1a	100	87.879	ENSXMAG00000026223	SAR1A	100	87.879	Xiphophorus_maculatus
ENSELUG00000013652	sar1a	100	82.323	ENSXMAG00000003130	sar1ab	100	82.323	Xiphophorus_maculatus