EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000013693 (Gene tree)
Gene ID: 105027299
Gene Symbol: nup35
Alias: fj68d11|wu:fj68d11|zgc:65979
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 14991 bases
Position: chrLG20:37001917-37016907
Accession: 105027299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000034957	Nup35_RRM	PF05172.13	8.1e-26	1	1
ENSELUP00000034935	Nup35_RRM	PF05172.13	8.5e-26	1	1
ENSELUP00000034947	Nup35_RRM	PF05172.13	8.6e-26	1	1
ENSELUP00000013582	Nup35_RRM	PF05172.13	9.4e-26	1	1
ENSELUP00000013582	Nup35_RRM_2	PF14605.6	8.2e-11	1	1
ENSELUP00000034957	Nup35_RRM_2	PF14605.6	1e-10	1	1
ENSELUP00000034935	Nup35_RRM_2	PF14605.6	1.1e-10	1	1
ENSELUP00000034947	Nup35_RRM_2	PF14605.6	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000022142	-	5123	XM_010899342	ENSELUP00000034935	309 (aa)	XP_010897644	UPI0005765EFC
ENSELUT00000022192	-	4524	-	ENSELUP00000034957	301 (aa)	-	-
ENSELUT00000022163	-	6250	-	ENSELUP00000013582	323 (aa)	-	-
ENSELUT00000022167	-	936	-	ENSELUP00000034947	311 (aa)	-	-

Gene Model

Click here to download ENSELUG00000013693's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013693's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013693	nup35	100	75.161	ENSG00000163002	NUP35	100	82.895	Homo_sapiens
ENSELUG00000013693	nup35	100	64.873	ENSAPOG00000003630	nup35	100	65.506	Acanthochromis_polyacanthus
ENSELUG00000013693	nup35	100	74.359	ENSAMEG00000001191	NUP35	96	74.367	Ailuropoda_melanoleuca
ENSELUG00000013693	nup35	86	64.093	ENSACIG00000023984	nup35	99	65.251	Amphilophus_citrinellus
ENSELUG00000013693	nup35	100	64.873	ENSAOCG00000007484	nup35	100	65.506	Amphiprion_ocellaris
ENSELUG00000013693	nup35	100	64.873	ENSAPEG00000020027	nup35	100	65.506	Amphiprion_percula
ENSELUG00000013693	nup35	100	66.013	ENSATEG00000019305	nup35	100	65.409	Anabas_testudineus
ENSELUG00000013693	nup35	100	75.884	ENSAPLG00000009161	NUP35	96	75.873	Anas_platyrhynchos
ENSELUG00000013693	nup35	100	71.753	ENSACAG00000008692	NUP35	95	71.795	Anolis_carolinensis
ENSELUG00000013693	nup35	100	74.516	ENSANAG00000021090	NUP35	96	74.522	Aotus_nancymaae
ENSELUG00000013693	nup35	100	64.198	ENSACLG00000013918	nup35	100	64.506	Astatotilapia_calliptera
ENSELUG00000013693	nup35	100	79.739	ENSAMXG00000003371	nup35	100	79.739	Astyanax_mexicanus
ENSELUG00000013693	nup35	100	74.516	ENSBTAG00000009777	NUP35	96	74.522	Bos_taurus
ENSELUG00000013693	nup35	100	74.839	ENSCJAG00000011104	NUP35	96	74.841	Callithrix_jacchus
ENSELUG00000013693	nup35	100	74.359	ENSCAFG00000031849	NUP35	100	74.359	Canis_familiaris
ENSELUG00000013693	nup35	100	74.359	ENSCAFG00020008408	NUP35	96	74.367	Canis_lupus_dingo
ENSELUG00000013693	nup35	100	74.516	ENSCHIG00000023148	NUP35	100	74.516	Capra_hircus
ENSELUG00000013693	nup35	100	75.161	ENSTSYG00000002117	NUP35	96	75.159	Carlito_syrichta
ENSELUG00000013693	nup35	100	61.538	ENSCAPG00000005703	NUP35	97	61.587	Cavia_aperea
ENSELUG00000013693	nup35	100	74.839	ENSCPOG00000011906	NUP35	97	74.760	Cavia_porcellus
ENSELUG00000013693	nup35	100	74.839	ENSCCAG00000025009	NUP35	99	72.596	Cebus_capucinus
ENSELUG00000013693	nup35	100	64.194	ENSCATG00000033109	NUP35	95	64.331	Cercocebus_atys
ENSELUG00000013693	nup35	100	74.839	ENSCLAG00000012559	NUP35	96	74.841	Chinchilla_lanigera
ENSELUG00000013693	nup35	100	74.839	ENSCSAG00000012620	NUP35	96	74.841	Chlorocebus_sabaeus
ENSELUG00000013693	nup35	100	75.806	ENSCPBG00000001303	NUP35	97	76.433	Chrysemys_picta_bellii
ENSELUG00000013693	nup35	99	42.415	ENSCING00000009659	-	99	41.994	Ciona_intestinalis
ENSELUG00000013693	nup35	99	41.543	ENSCSAVG00000007467	-	100	41.399	Ciona_savignyi
ENSELUG00000013693	nup35	100	74.839	ENSCANG00000030785	NUP35	98	76.923	Colobus_angolensis_palliatus
ENSELUG00000013693	nup35	100	73.786	ENSCGRG00001018638	-	96	73.802	Cricetulus_griseus_chok1gshd
ENSELUG00000013693	nup35	100	73.786	ENSCGRG00000011313	-	96	73.802	Cricetulus_griseus_crigri
ENSELUG00000013693	nup35	100	65.312	ENSCSEG00000000938	nup35	100	65.312	Cynoglossus_semilaevis
ENSELUG00000013693	nup35	100	66.558	ENSCVAG00000001792	nup35	98	66.349	Cyprinodon_variegatus
ENSELUG00000013693	nup35	100	79.016	ENSDARG00000012222	nup35	100	79.016	Danio_rerio
ENSELUG00000013693	nup35	100	74.516	ENSDNOG00000009513	-	85	74.522	Dasypus_novemcinctus
ENSELUG00000013693	nup35	100	73.871	ENSDNOG00000038754	-	96	73.885	Dasypus_novemcinctus
ENSELUG00000013693	nup35	100	74.516	ENSDORG00000010458	-	98	73.899	Dipodomys_ordii
ENSELUG00000013693	nup35	100	73.871	ENSETEG00000005896	NUP35	100	73.802	Echinops_telfairi
ENSELUG00000013693	nup35	100	56.587	ENSEBUG00000013034	nup35	100	56.627	Eptatretus_burgeri
ENSELUG00000013693	nup35	100	74.839	ENSEASG00005022100	NUP35	96	74.841	Equus_asinus_asinus
ENSELUG00000013693	nup35	100	74.839	ENSECAG00000003968	NUP35	100	74.839	Equus_caballus
ENSELUG00000013693	nup35	100	67.097	ENSEEUG00000008469	NUP35	96	67.197	Erinaceus_europaeus
ENSELUG00000013693	nup35	100	73.718	ENSFCAG00000025636	NUP35	100	74.359	Felis_catus
ENSELUG00000013693	nup35	100	72.581	ENSFALG00000013175	NUP35	97	72.930	Ficedula_albicollis
ENSELUG00000013693	nup35	100	74.839	ENSFDAG00000017998	NUP35	96	74.841	Fukomys_damarensis
ENSELUG00000013693	nup35	100	66.139	ENSFHEG00000010229	nup35	100	66.144	Fundulus_heteroclitus
ENSELUG00000013693	nup35	83	61.811	ENSGMOG00000003337	nup35	99	61.811	Gadus_morhua
ENSELUG00000013693	nup35	100	73.871	ENSGALG00000002689	NUP35	97	73.885	Gallus_gallus
ENSELUG00000013693	nup35	100	64.286	ENSGAFG00000022048	nup35	100	64.907	Gambusia_affinis
ENSELUG00000013693	nup35	100	66.242	ENSGACG00000008203	nup35	100	66.242	Gasterosteus_aculeatus
ENSELUG00000013693	nup35	100	75.884	ENSGAGG00000001967	NUP35	100	75.884	Gopherus_agassizii
ENSELUG00000013693	nup35	100	75.161	ENSGGOG00000009919	NUP35	99	74.877	Gorilla_gorilla
ENSELUG00000013693	nup35	97	62.136	ENSHGLG00000008616	-	94	62.460	Heterocephalus_glaber_female
ENSELUG00000013693	nup35	100	57.419	ENSHGLG00000000414	-	97	57.643	Heterocephalus_glaber_female
ENSELUG00000013693	nup35	100	74.516	ENSHGLG00000013230	NUP35	96	74.522	Heterocephalus_glaber_female
ENSELUG00000013693	nup35	97	62.136	ENSHGLG00100000091	-	94	62.623	Heterocephalus_glaber_male
ENSELUG00000013693	nup35	100	57.419	ENSHGLG00100010869	-	97	57.643	Heterocephalus_glaber_male
ENSELUG00000013693	nup35	100	74.516	ENSHGLG00100012840	NUP35	96	74.522	Heterocephalus_glaber_male
ENSELUG00000013693	nup35	100	63.722	ENSHCOG00000003882	nup35	100	63.722	Hippocampus_comes
ENSELUG00000013693	nup35	100	74.098	ENSIPUG00000002798	nup35	100	73.567	Ictalurus_punctatus
ENSELUG00000013693	nup35	100	73.548	ENSSTOG00000000711	NUP35	96	73.567	Ictidomys_tridecemlineatus
ENSELUG00000013693	nup35	100	63.961	ENSJJAG00000007003	-	98	62.769	Jaculus_jaculus
ENSELUG00000013693	nup35	89	66.906	ENSJJAG00000006387	-	93	66.906	Jaculus_jaculus
ENSELUG00000013693	nup35	99	66.343	ENSJJAG00000017434	-	95	66.454	Jaculus_jaculus
ENSELUG00000013693	nup35	100	73.548	ENSJJAG00000016432	-	98	73.270	Jaculus_jaculus
ENSELUG00000013693	nup35	100	62.539	ENSKMAG00000011162	nup35	100	64.062	Kryptolebias_marmoratus
ENSELUG00000013693	nup35	100	55.305	ENSLBEG00000012416	nup35	100	55.305	Labrus_bergylta
ENSELUG00000013693	nup35	100	75.563	ENSLACG00000008247	NUP35	100	75.563	Latimeria_chalumnae
ENSELUG00000013693	nup35	100	77.603	ENSLOCG00000006726	nup35	100	77.603	Lepisosteus_oculatus
ENSELUG00000013693	nup35	100	73.567	ENSLAFG00000008155	NUP35	96	73.585	Loxodonta_africana
ENSELUG00000013693	nup35	100	74.516	ENSMFAG00000000834	NUP35	100	74.516	Macaca_fascicularis
ENSELUG00000013693	nup35	100	74.839	ENSMMUG00000004140	NUP35	99	74.760	Macaca_mulatta
ENSELUG00000013693	nup35	100	74.839	ENSMNEG00000029014	NUP35	96	74.841	Macaca_nemestrina
ENSELUG00000013693	nup35	100	74.839	ENSMLEG00000035422	NUP35	98	76.923	Mandrillus_leucophaeus
ENSELUG00000013693	nup35	100	65.815	ENSMAMG00000013232	nup35	100	65.495	Mastacembelus_armatus
ENSELUG00000013693	nup35	100	65.147	ENSMZEG00005020619	nup35	98	62.333	Maylandia_zebra
ENSELUG00000013693	nup35	100	71.613	ENSMGAG00000004412	NUP35	95	71.935	Meleagris_gallopavo
ENSELUG00000013693	nup35	100	73.871	ENSMAUG00000013776	-	96	73.885	Mesocricetus_auratus
ENSELUG00000013693	nup35	100	74.516	ENSMICG00000006790	NUP35	100	74.516	Microcebus_murinus
ENSELUG00000013693	nup35	100	74.194	ENSMOCG00000014754	-	96	74.204	Microtus_ochrogaster
ENSELUG00000013693	nup35	100	64.901	ENSMMOG00000005026	nup35	100	64.856	Mola_mola
ENSELUG00000013693	nup35	100	74.839	ENSMODG00000010578	NUP35	96	74.841	Monodelphis_domestica
ENSELUG00000013693	nup35	100	66.238	ENSMALG00000020187	nup35	100	66.238	Monopterus_albus
ENSELUG00000013693	nup35	100	75.161	MGP_CAROLIEiJ_G0023709	-	96	75.159	Mus_caroli
ENSELUG00000013693	nup35	100	74.839	ENSMUSG00000026999	Nup35	96	74.841	Mus_musculus
ENSELUG00000013693	nup35	100	75.484	MGP_PahariEiJ_G0025160	-	96	75.478	Mus_pahari
ENSELUG00000013693	nup35	87	64.784	MGP_SPRETEiJ_G0033063	-	100	64.784	Mus_spretus
ENSELUG00000013693	nup35	100	74.038	ENSMPUG00000002063	NUP35	96	74.684	Mustela_putorius_furo
ENSELUG00000013693	nup35	100	76.452	ENSMLUG00000013154	NUP35	96	76.433	Myotis_lucifugus
ENSELUG00000013693	nup35	100	73.226	ENSNGAG00000012107	-	96	73.248	Nannospalax_galili
ENSELUG00000013693	nup35	100	64.952	ENSNBRG00000020466	nup35	98	66.242	Neolamprologus_brichardi
ENSELUG00000013693	nup35	100	75.161	ENSNLEG00000035026	NUP35	100	75.161	Nomascus_leucogenys
ENSELUG00000013693	nup35	69	55.189	ENSMEUG00000003001	-	65	55.189	Notamacropus_eugenii
ENSELUG00000013693	nup35	83	71.373	ENSOPRG00000016609	NUP35	78	71.373	Ochotona_princeps
ENSELUG00000013693	nup35	100	74.194	ENSODEG00000011202	-	97	73.734	Octodon_degus
ENSELUG00000013693	nup35	99	52.805	ENSODEG00000000280	-	95	53.094	Octodon_degus
ENSELUG00000013693	nup35	100	64.087	ENSONIG00000016251	nup35	100	64.396	Oreochromis_niloticus
ENSELUG00000013693	nup35	74	76.724	ENSOANG00000006793	-	97	76.695	Ornithorhynchus_anatinus
ENSELUG00000013693	nup35	100	74.194	ENSOCUG00000014407	NUP35	96	74.204	Oryctolagus_cuniculus
ENSELUG00000013693	nup35	100	65.409	ENSORLG00000013588	nup35	100	65.409	Oryzias_latipes
ENSELUG00000013693	nup35	100	65.409	ENSORLG00020008201	nup35	100	65.409	Oryzias_latipes_hni
ENSELUG00000013693	nup35	100	65.094	ENSORLG00015011096	nup35	100	65.094	Oryzias_latipes_hsok
ENSELUG00000013693	nup35	100	65.409	ENSOMEG00000007628	nup35	100	65.409	Oryzias_melastigma
ENSELUG00000013693	nup35	100	73.548	ENSOGAG00000011920	NUP35	96	73.567	Otolemur_garnettii
ENSELUG00000013693	nup35	100	74.839	ENSOARG00000016728	NUP35	96	74.841	Ovis_aries
ENSELUG00000013693	nup35	100	75.161	ENSPPAG00000036316	NUP35	100	75.161	Pan_paniscus
ENSELUG00000013693	nup35	100	74.038	ENSPPRG00000024726	NUP35	100	74.679	Panthera_pardus
ENSELUG00000013693	nup35	100	74.038	ENSPTIG00000017299	NUP35	96	74.684	Panthera_tigris_altaica
ENSELUG00000013693	nup35	100	75.161	ENSPTRG00000012711	NUP35	100	75.161	Pan_troglodytes
ENSELUG00000013693	nup35	100	74.839	ENSPANG00000013686	NUP35	96	74.841	Papio_anubis
ENSELUG00000013693	nup35	100	80.065	ENSPKIG00000022051	nup35	100	79.936	Paramormyrops_kingsleyae
ENSELUG00000013693	nup35	100	75.484	ENSPSIG00000002146	NUP35	100	75.484	Pelodiscus_sinensis
ENSELUG00000013693	nup35	100	63.245	ENSPMGG00000022915	nup35	100	61.755	Periophthalmus_magnuspinnatus
ENSELUG00000013693	nup35	100	74.194	ENSPEMG00000014718	-	96	74.204	Peromyscus_maniculatus_bairdii
ENSELUG00000013693	nup35	100	59.502	ENSPMAG00000006604	nup35	98	59.509	Petromyzon_marinus
ENSELUG00000013693	nup35	100	75.806	ENSPCIG00000015482	NUP35	96	75.796	Phascolarctos_cinereus
ENSELUG00000013693	nup35	100	63.975	ENSPFOG00000010020	nup35	100	64.596	Poecilia_formosa
ENSELUG00000013693	nup35	100	63.665	ENSPLAG00000005867	nup35	100	64.286	Poecilia_latipinna
ENSELUG00000013693	nup35	100	65.461	ENSPMEG00000010552	nup35	100	65.815	Poecilia_mexicana
ENSELUG00000013693	nup35	100	65.484	ENSPREG00000021005	nup35	100	66.452	Poecilia_reticulata
ENSELUG00000013693	nup35	100	75.161	ENSPPYG00000012998	-	77	75.238	Pongo_abelii
ENSELUG00000013693	nup35	83	80.000	ENSPCAG00000000605	NUP35	79	80.000	Procavia_capensis
ENSELUG00000013693	nup35	100	74.839	ENSPCOG00000024097	NUP35	96	74.841	Propithecus_coquereli
ENSELUG00000013693	nup35	100	75.484	ENSPVAG00000015908	NUP35	96	75.478	Pteropus_vampyrus
ENSELUG00000013693	nup35	100	65.696	ENSPNYG00000012486	nup35	95	65.815	Pundamilia_nyererei
ENSELUG00000013693	nup35	100	80.719	ENSPNAG00000005181	nup35	99	80.192	Pygocentrus_nattereri
ENSELUG00000013693	nup35	100	75.161	ENSRNOG00000009290	Nup35	96	75.159	Rattus_norvegicus
ENSELUG00000013693	nup35	100	74.839	ENSRBIG00000039427	NUP35	98	76.923	Rhinopithecus_bieti
ENSELUG00000013693	nup35	100	74.839	ENSRROG00000026525	NUP35	98	76.923	Rhinopithecus_roxellana
ENSELUG00000013693	nup35	100	74.516	ENSSBOG00000018676	NUP35	99	73.077	Saimiri_boliviensis_boliviensis
ENSELUG00000013693	nup35	100	75.806	ENSSHAG00000009746	NUP35	96	75.796	Sarcophilus_harrisii
ENSELUG00000013693	nup35	100	80.065	ENSSFOG00015002390	nup35	100	79.683	Scleropages_formosus
ENSELUG00000013693	nup35	100	66.026	ENSSMAG00000015651	nup35	100	66.026	Scophthalmus_maximus
ENSELUG00000013693	nup35	100	66.776	ENSSDUG00000013118	nup35	100	66.773	Seriola_dumerili
ENSELUG00000013693	nup35	100	66.997	ENSSLDG00000018249	nup35	98	67.101	Seriola_lalandi_dorsalis
ENSELUG00000013693	nup35	83	88.000	ENSSARG00000001535	-	82	88.000	Sorex_araneus
ENSELUG00000013693	nup35	100	72.903	ENSSPUG00000018651	NUP35	97	72.698	Sphenodon_punctatus
ENSELUG00000013693	nup35	100	66.667	ENSSPAG00000018264	nup35	100	65.823	Stegastes_partitus
ENSELUG00000013693	nup35	100	74.839	ENSSSCG00000028949	NUP35	96	74.841	Sus_scrofa
ENSELUG00000013693	nup35	100	70.833	ENSTGUG00000011278	NUP35	97	70.886	Taeniopygia_guttata
ENSELUG00000013693	nup35	93	61.486	ENSTRUG00000014111	nup35	100	61.486	Takifugu_rubripes
ENSELUG00000013693	nup35	100	55.960	ENSTNIG00000011568	nup35	96	56.494	Tetraodon_nigroviridis
ENSELUG00000013693	nup35	100	72.258	ENSTBEG00000003328	NUP35	96	72.293	Tupaia_belangeri
ENSELUG00000013693	nup35	100	64.194	ENSTTRG00000002512	NUP35	95	64.331	Tursiops_truncatus
ENSELUG00000013693	nup35	64	75.635	ENSUAMG00000018696	-	96	75.635	Ursus_americanus
ENSELUG00000013693	nup35	92	73.264	ENSUMAG00000017104	NUP35	95	73.973	Ursus_maritimus
ENSELUG00000013693	nup35	100	75.161	ENSVPAG00000011898	NUP35	96	75.159	Vicugna_pacos
ENSELUG00000013693	nup35	100	74.679	ENSVVUG00000016832	NUP35	100	74.679	Vulpes_vulpes
ENSELUG00000013693	nup35	100	65.260	ENSXETG00000001335	nup35	100	61.329	Xenopus_tropicalis
ENSELUG00000013693	nup35	100	64.907	ENSXMAG00000000409	nup35	100	65.528	Xiphophorus_maculatus