EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013705 (Gene tree)
Gene ID: 105024611
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6543 bases
Position: chrLG07:11647461-11654003
Accession: 105024611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013626	Nucleoplasmin	PF03066.15	6.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000022216	-	3766	XM_010894653	ENSELUP00000013626	293 (aa)	XP_010892955	UPI0005770C21

Gene Model

Click here to download ENSELUG00000013705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013705	npm1a	97	39.735	ENSELUG00000022123	npm1b	95	39.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013705	npm1a	100	68.977	ENSAPOG00000002813	npm1a	100	68.317	Acanthochromis_polyacanthus
ENSELUG00000013705	npm1a	94	66.078	ENSACIG00000014201	npm1a	100	68.905	Amphilophus_citrinellus
ENSELUG00000013705	npm1a	89	62.308	ENSAOCG00000004978	npm1a	100	62.692	Amphiprion_ocellaris
ENSELUG00000013705	npm1a	100	69.667	ENSAPEG00000008594	npm1a	100	68.333	Amphiprion_percula
ENSELUG00000013705	npm1a	100	71.154	ENSATEG00000008885	npm1a	99	71.429	Anabas_testudineus
ENSELUG00000013705	npm1a	97	60.702	ENSACLG00000008376	npm1a	96	61.404	Astatotilapia_calliptera
ENSELUG00000013705	npm1a	98	56.271	ENSAMXG00000010155	npm1a	99	59.524	Astyanax_mexicanus
ENSELUG00000013705	npm1a	100	56.314	ENSCSEG00000011165	npm1a	96	81.699	Cynoglossus_semilaevis
ENSELUG00000013705	npm1a	100	65.449	ENSCVAG00000008960	npm1a	100	66.445	Cyprinodon_variegatus
ENSELUG00000013705	npm1a	98	65.625	ENSDARG00000014329	npm1a	99	75.000	Danio_rerio
ENSELUG00000013705	npm1a	94	36.250	ENSEBUG00000012753	npm1a	90	37.931	Eptatretus_burgeri
ENSELUG00000013705	npm1a	100	66.885	ENSFHEG00000012496	npm1a	100	66.557	Fundulus_heteroclitus
ENSELUG00000013705	npm1a	100	61.639	ENSGAFG00000013059	npm1a	100	61.311	Gambusia_affinis
ENSELUG00000013705	npm1a	99	64.041	ENSGACG00000020319	npm1a	99	61.986	Gasterosteus_aculeatus
ENSELUG00000013705	npm1a	99	63.950	ENSHBUG00000000776	npm1a	100	64.890	Haplochromis_burtoni
ENSELUG00000013705	npm1a	100	51.815	ENSHCOG00000001059	npm1a	98	52.508	Hippocampus_comes
ENSELUG00000013705	npm1a	98	63.545	ENSIPUG00000019452	npm1	99	65.541	Ictalurus_punctatus
ENSELUG00000013705	npm1a	100	63.636	ENSKMAG00000010709	npm1a	100	63.300	Kryptolebias_marmoratus
ENSELUG00000013705	npm1a	100	68.439	ENSLBEG00000008793	npm1a	100	68.771	Labrus_bergylta
ENSELUG00000013705	npm1a	85	55.805	ENSLOCG00000009683	npm1a	100	55.805	Lepisosteus_oculatus
ENSELUG00000013705	npm1a	100	69.231	ENSMAMG00000009344	npm1a	83	69.231	Mastacembelus_armatus
ENSELUG00000013705	npm1a	99	64.038	ENSMZEG00005013717	npm1a	100	64.669	Maylandia_zebra
ENSELUG00000013705	npm1a	95	68.214	ENSMMOG00000007980	npm1a	100	69.286	Mola_mola
ENSELUG00000013705	npm1a	100	65.347	ENSMALG00000001146	npm1a	100	66.667	Monopterus_albus
ENSELUG00000013705	npm1a	99	60.312	ENSNBRG00000013172	npm1a	100	60.625	Neolamprologus_brichardi
ENSELUG00000013705	npm1a	99	63.487	ENSONIG00000001860	npm1a	99	65.132	Oreochromis_niloticus
ENSELUG00000013705	npm1a	100	68.814	ENSORLG00000010179	npm1a	100	68.814	Oryzias_latipes
ENSELUG00000013705	npm1a	100	68.027	ENSORLG00020020817	npm1a	100	68.367	Oryzias_latipes_hni
ENSELUG00000013705	npm1a	100	68.814	ENSORLG00015003439	npm1a	100	68.814	Oryzias_latipes_hsok
ENSELUG00000013705	npm1a	100	66.216	ENSOMEG00000007083	npm1a	100	66.216	Oryzias_melastigma
ENSELUG00000013705	npm1a	100	58.497	ENSPKIG00000023943	npm1a	100	58.361	Paramormyrops_kingsleyae
ENSELUG00000013705	npm1a	100	53.020	ENSPMGG00000011716	npm1a	100	52.685	Periophthalmus_magnuspinnatus
ENSELUG00000013705	npm1a	100	63.907	ENSPFOG00000019173	npm1a	100	63.907	Poecilia_formosa
ENSELUG00000013705	npm1a	100	64.356	ENSPLAG00000001093	npm1a	100	63.036	Poecilia_latipinna
ENSELUG00000013705	npm1a	100	63.907	ENSPMEG00000012523	npm1a	100	63.907	Poecilia_mexicana
ENSELUG00000013705	npm1a	100	66.556	ENSPREG00000001647	npm1a	100	65.232	Poecilia_reticulata
ENSELUG00000013705	npm1a	99	65.605	ENSPNYG00000019321	npm1a	100	66.242	Pundamilia_nyererei
ENSELUG00000013705	npm1a	98	64.164	ENSPNAG00000026891	npm1a	99	63.140	Pygocentrus_nattereri
ENSELUG00000013705	npm1a	100	64.865	ENSSFOG00015007074	npm1a	100	64.189	Scleropages_formosus
ENSELUG00000013705	npm1a	100	68.475	ENSSMAG00000019090	npm1a	100	68.475	Scophthalmus_maximus
ENSELUG00000013705	npm1a	100	69.333	ENSSDUG00000015609	npm1a	100	70.000	Seriola_dumerili
ENSELUG00000013705	npm1a	100	70.903	ENSSLDG00000017849	npm1a	100	71.572	Seriola_lalandi_dorsalis
ENSELUG00000013705	npm1a	100	57.338	ENSSPAG00000021660	npm1a	100	59.386	Stegastes_partitus
ENSELUG00000013705	npm1a	100	66.013	ENSTRUG00000024003	npm1a	100	66.013	Takifugu_rubripes
ENSELUG00000013705	npm1a	100	67.003	ENSTNIG00000010773	npm1a	100	67.677	Tetraodon_nigroviridis
ENSELUG00000013705	npm1a	99	57.823	ENSXCOG00000005958	npm1a	99	61.268	Xiphophorus_couchianus
ENSELUG00000013705	npm1a	100	64.379	ENSXMAG00000000396	npm1a	100	63.072	Xiphophorus_maculatus