EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013844 (Gene tree)
Gene ID: 106023923
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF6-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 21103 bases
Position: chrAZJR03000966.1:93249-114351
Accession: 106023922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	1	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	2	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	3	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	4	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	5	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	6	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	7	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	8	9
ENSELUP00000013771	zf-C2H2	PF00096.26	1.4e-48	9	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	1	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	2	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	3	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	4	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	5	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	6	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	7	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	8	9
ENSELUP00000013761	zf-C2H2	PF00096.26	6.1e-48	9	9
ENSELUP00000013757	zf-C2H2	PF00096.26	6.5e-45	1	7
ENSELUP00000013757	zf-C2H2	PF00096.26	6.5e-45	2	7
ENSELUP00000013757	zf-C2H2	PF00096.26	6.5e-45	3	7
ENSELUP00000013757	zf-C2H2	PF00096.26	6.5e-45	4	7
ENSELUP00000013757	zf-C2H2	PF00096.26	6.5e-45	5	7
ENSELUP00000013757	zf-C2H2	PF00096.26	6.5e-45	6	7
ENSELUP00000013757	zf-C2H2	PF00096.26	6.5e-45	7	7
ENSELUP00000013771	zf-met	PF12874.7	6.9e-06	1	1
ENSELUP00000013761	zf-met	PF12874.7	0.00021	1	1
ENSELUP00000013757	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000022376	-	1779	-	ENSELUP00000013771	592 (aa)	-	-
ENSELUT00000022380	-	2505	XM_013132320	ENSELUP00000013761	771 (aa)	XP_012987774	UPI000661E326
ENSELUT00000038645	-	2678	XM_013132325	ENSELUP00000013757	586 (aa)	XP_012987779	UPI000661BAF9

Gene Model

Click here to download ENSELUG00000013844's gene model file

Pathways

Pathway ID	Pathway Name	Source
els05168	Herpes simplex virus 1 infection	KEGG
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013844	-	81	32.768	ENSELUG00000010993	znf319b	96	34.456
ENSELUG00000013844	-	88	43.168	ENSELUG00000012597	-	99	50.296
ENSELUG00000013844	-	81	33.557	ENSELUG00000016933	gfi1b	56	40.288
ENSELUG00000013844	-	86	40.000	ENSELUG00000019880	-	95	50.000
ENSELUG00000013844	-	77	47.619	ENSELUG00000006058	-	84	41.667
ENSELUG00000013844	-	77	34.815	ENSELUG00000021229	-	83	40.860
ENSELUG00000013844	-	60	40.336	ENSELUG00000010454	-	63	40.336
ENSELUG00000013844	-	80	35.455	ENSELUG00000021381	-	72	39.462
ENSELUG00000013844	-	86	30.000	ENSELUG00000006251	ZNF384	63	34.328
ENSELUG00000013844	-	82	50.000	ENSELUG00000018737	znf526	87	31.179
ENSELUG00000013844	-	89	33.738	ENSELUG00000019008	-	86	44.152
ENSELUG00000013844	-	75	34.807	ENSELUG00000021560	-	73	38.246
ENSELUG00000013844	-	90	37.615	ENSELUG00000018405	-	89	57.143
ENSELUG00000013844	-	81	37.500	ENSELUG00000020794	-	64	39.597
ENSELUG00000013844	-	86	38.318	ENSELUG00000001968	-	71	46.053
ENSELUG00000013844	-	93	40.659	ENSELUG00000013342	-	93	39.888
ENSELUG00000013844	-	97	42.424	ENSELUG00000013064	-	81	58.427
ENSELUG00000013844	-	82	32.456	ENSELUG00000010566	si:dkey-182i3.9	64	43.689
ENSELUG00000013844	-	81	36.735	ENSELUG00000013581	GZF1	51	37.037
ENSELUG00000013844	-	75	37.086	ENSELUG00000021551	-	73	40.580
ENSELUG00000013844	-	63	57.143	ENSELUG00000024006	-	58	38.728
ENSELUG00000013844	-	86	36.792	ENSELUG00000018970	-	84	44.853
ENSELUG00000013844	-	90	33.026	ENSELUG00000013357	-	89	46.377
ENSELUG00000013844	-	86	44.444	ENSELUG00000013245	-	97	48.113
ENSELUG00000013844	-	76	35.648	ENSELUG00000021242	-	93	39.901
ENSELUG00000013844	-	86	34.860	ENSELUG00000021248	-	94	40.000
ENSELUG00000013844	-	84	34.440	ENSELUG00000005912	-	85	42.655
ENSELUG00000013844	-	81	33.333	ENSELUG00000001909	-	82	34.615
ENSELUG00000013844	-	86	38.699	ENSELUG00000012931	-	91	40.299
ENSELUG00000013844	-	78	37.879	ENSELUG00000018438	znf341	54	36.095
ENSELUG00000013844	-	82	41.473	ENSELUG00000022942	-	64	47.735
ENSELUG00000013844	-	88	36.296	ENSELUG00000016397	-	66	38.367
ENSELUG00000013844	-	85	37.531	ENSELUG00000021391	-	71	46.758
ENSELUG00000013844	-	80	54.000	ENSELUG00000022965	-	55	44.068
ENSELUG00000013844	-	76	37.611	ENSELUG00000000485	-	90	48.494
ENSELUG00000013844	-	88	40.865	ENSELUG00000008797	-	65	40.865
ENSELUG00000013844	-	78	41.818	ENSELUG00000024007	-	81	41.739
ENSELUG00000013844	-	81	31.235	ENSELUG00000017783	-	68	33.642
ENSELUG00000013844	-	89	35.586	ENSELUG00000013806	-	95	35.465
ENSELUG00000013844	-	92	32.773	ENSELUG00000021287	-	97	45.238
ENSELUG00000013844	-	76	42.500	ENSELUG00000020211	znf236	76	43.443
ENSELUG00000013844	-	80	48.148	ENSELUG00000017463	-	89	48.148
ENSELUG00000013844	-	83	34.466	ENSELUG00000011838	-	65	45.000
ENSELUG00000013844	-	75	56.863	ENSELUG00000017774	-	69	44.681
ENSELUG00000013844	-	87	32.673	ENSELUG00000021525	-	76	42.278
ENSELUG00000013844	-	59	47.368	ENSELUG00000017233	znf652	65	30.318
ENSELUG00000013844	-	89	40.439	ENSELUG00000021254	-	85	40.506
ENSELUG00000013844	-	69	30.702	ENSELUG00000010423	znf646	82	35.821
ENSELUG00000013844	-	84	35.821	ENSELUG00000008148	-	82	40.110
ENSELUG00000013844	-	92	40.226	ENSELUG00000004677	-	65	40.226
ENSELUG00000013844	-	94	39.141	ENSELUG00000013094	-	97	53.608
ENSELUG00000013844	-	79	35.111	ENSELUG00000013321	-	94	43.719
ENSELUG00000013844	-	86	40.753	ENSELUG00000017958	-	83	42.708
ENSELUG00000013844	-	76	46.296	ENSELUG00000007694	-	80	46.645
ENSELUG00000013844	-	87	40.909	ENSELUG00000013311	-	72	40.196
ENSELUG00000013844	-	77	32.308	ENSELUG00000002844	-	51	37.895
ENSELUG00000013844	-	78	32.400	ENSELUG00000009654	-	72	32.800
ENSELUG00000013844	-	85	34.076	ENSELUG00000019204	-	99	46.392
ENSELUG00000013844	-	76	40.741	ENSELUG00000008171	-	51	48.993
ENSELUG00000013844	-	89	33.509	ENSELUG00000013796	-	63	42.033
ENSELUG00000013844	-	79	38.783	ENSELUG00000012986	-	51	37.073
ENSELUG00000013844	-	68	41.935	ENSELUG00000017454	si:ch73-367f21.6	95	41.935
ENSELUG00000013844	-	76	31.157	ENSELUG00000005894	prdm5	72	32.063
ENSELUG00000013844	-	70	30.743	ENSELUG00000005665	zfp64	89	40.217
ENSELUG00000013844	-	72	42.593	ENSELUG00000010470	-	54	42.593
ENSELUG00000013844	-	61	39.600	ENSELUG00000008786	-	68	39.600
ENSELUG00000013844	-	82	45.283	ENSELUG00000000281	-	80	49.231
ENSELUG00000013844	-	75	38.278	ENSELUG00000020017	-	69	38.278
ENSELUG00000013844	-	91	36.905	ENSELUG00000021499	-	96	45.886
ENSELUG00000013844	-	92	35.955	ENSELUG00000009575	-	99	45.882
ENSELUG00000013844	-	89	41.837	ENSELUG00000021355	-	97	47.977
ENSELUG00000013844	-	67	42.258	ENSELUG00000013348	-	97	38.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013844	-	80	33.533	ENSAPOG00000004328	-	86	38.841	Acanthochromis_polyacanthus
ENSELUG00000013844	-	76	46.429	ENSAPOG00000013511	-	62	39.446	Acanthochromis_polyacanthus
ENSELUG00000013844	-	93	32.727	ENSACIG00000010739	-	79	37.578	Amphilophus_citrinellus
ENSELUG00000013844	-	80	34.663	ENSAOCG00000007045	-	82	39.763	Amphiprion_ocellaris
ENSELUG00000013844	-	76	50.000	ENSAPEG00000016483	-	58	46.429	Amphiprion_percula
ENSELUG00000013844	-	84	33.696	ENSAPEG00000001596	-	76	39.077	Amphiprion_percula
ENSELUG00000013844	-	90	33.333	ENSATEG00000006085	-	85	40.404	Anabas_testudineus
ENSELUG00000013844	-	89	37.953	ENSACAG00000000082	-	99	47.384	Anolis_carolinensis
ENSELUG00000013844	-	88	42.213	ENSACAG00000025537	-	99	46.462	Anolis_carolinensis
ENSELUG00000013844	-	87	43.624	ENSAMXG00000012873	-	98	45.017	Astyanax_mexicanus
ENSELUG00000013844	-	82	36.709	ENSAMXG00000032237	-	93	46.018	Astyanax_mexicanus
ENSELUG00000013844	-	85	38.224	ENSAMXG00000035145	-	64	51.389	Astyanax_mexicanus
ENSELUG00000013844	-	91	44.019	ENSAMXG00000033013	-	89	47.863	Astyanax_mexicanus
ENSELUG00000013844	-	80	35.096	ENSAMXG00000017199	-	50	37.050	Astyanax_mexicanus
ENSELUG00000013844	-	82	41.549	ENSAMXG00000036257	-	94	49.451	Astyanax_mexicanus
ENSELUG00000013844	-	76	38.754	ENSAMXG00000026143	-	96	44.675	Astyanax_mexicanus
ENSELUG00000013844	-	76	42.500	ENSAMXG00000035949	-	81	49.635	Astyanax_mexicanus
ENSELUG00000013844	-	84	35.366	ENSCVAG00000011235	-	89	40.909	Cyprinodon_variegatus
ENSELUG00000013844	-	77	42.857	ENSFHEG00000019915	-	74	39.936	Fundulus_heteroclitus
ENSELUG00000013844	-	85	32.895	ENSGMOG00000003238	-	100	41.573	Gadus_morhua
ENSELUG00000013844	-	81	32.597	ENSGAFG00000003150	-	99	47.222	Gambusia_affinis
ENSELUG00000013844	-	90	33.333	ENSGAFG00000012977	-	86	39.306	Gambusia_affinis
ENSELUG00000013844	-	79	35.897	ENSIPUG00000006916	-	84	46.903	Ictalurus_punctatus
ENSELUG00000013844	-	83	37.826	ENSIPUG00000004428	-	78	47.340	Ictalurus_punctatus
ENSELUG00000013844	-	76	42.593	ENSIPUG00000021556	-	86	50.345	Ictalurus_punctatus
ENSELUG00000013844	-	81	35.417	ENSKMAG00000004988	-	93	38.889	Kryptolebias_marmoratus
ENSELUG00000013844	-	89	35.412	ENSLOCG00000014144	-	100	45.890	Lepisosteus_oculatus
ENSELUG00000013844	-	70	39.931	ENSLOCG00000014366	-	93	42.767	Lepisosteus_oculatus
ENSELUG00000013844	-	92	33.333	ENSMAMG00000019301	-	96	50.000	Mastacembelus_armatus
ENSELUG00000013844	-	76	54.000	ENSMAMG00000016542	-	70	54.000	Mastacembelus_armatus
ENSELUG00000013844	-	85	39.726	ENSMMOG00000009852	-	98	39.726	Mola_mola
ENSELUG00000013844	-	90	35.404	ENSMALG00000005554	-	91	38.492	Monopterus_albus
ENSELUG00000013844	-	77	33.333	ENSOCUG00000005876	-	100	42.857	Oryctolagus_cuniculus
ENSELUG00000013844	-	97	42.947	ENSPKIG00000006616	-	70	37.452	Paramormyrops_kingsleyae
ENSELUG00000013844	-	83	32.203	ENSPMGG00000017633	-	87	39.375	Periophthalmus_magnuspinnatus
ENSELUG00000013844	-	90	33.073	ENSPFOG00000010682	-	99	38.222	Poecilia_formosa
ENSELUG00000013844	-	85	36.364	ENSPLAG00000002892	-	79	39.271	Poecilia_latipinna
ENSELUG00000013844	-	90	33.333	ENSPMEG00000001399	-	90	36.991	Poecilia_mexicana
ENSELUG00000013844	-	90	33.333	ENSPREG00000001386	-	90	36.991	Poecilia_reticulata
ENSELUG00000013844	-	71	32.673	ENSPREG00000002582	-	65	37.238	Poecilia_reticulata
ENSELUG00000013844	-	83	34.402	ENSPNAG00000025570	-	80	40.233	Pygocentrus_nattereri
ENSELUG00000013844	-	78	43.200	ENSPNAG00000015116	-	69	47.266	Pygocentrus_nattereri
ENSELUG00000013844	-	80	37.714	ENSPNAG00000000219	-	87	46.290	Pygocentrus_nattereri
ENSELUG00000013844	-	88	39.062	ENSSFOG00015006108	-	58	44.853	Scleropages_formosus
ENSELUG00000013844	-	89	41.270	ENSSMAG00000009115	-	92	58.000	Scophthalmus_maximus
ENSELUG00000013844	-	92	33.333	ENSSDUG00000006463	-	86	39.710	Seriola_dumerili
ENSELUG00000013844	-	89	38.235	ENSSDUG00000002195	-	90	50.000	Seriola_dumerili
ENSELUG00000013844	-	80	38.596	ENSSLDG00000020727	-	95	45.714	Seriola_lalandi_dorsalis
ENSELUG00000013844	-	92	33.333	ENSSLDG00000006724	-	95	46.000	Seriola_lalandi_dorsalis
ENSELUG00000013844	-	80	38.776	ENSSPAG00000021008	-	92	49.412	Stegastes_partitus
ENSELUG00000013844	-	77	35.685	ENSSPAG00000012960	-	88	35.685	Stegastes_partitus
ENSELUG00000013844	-	76	37.456	ENSTRUG00000021675	-	77	48.734	Takifugu_rubripes
ENSELUG00000013844	-	87	41.071	ENSTRUG00000005321	-	97	39.826	Takifugu_rubripes
ENSELUG00000013844	-	89	48.214	ENSTNIG00000008200	-	99	50.327	Tetraodon_nigroviridis
ENSELUG00000013844	-	79	41.333	ENSTNIG00000000320	-	99	48.101	Tetraodon_nigroviridis
ENSELUG00000013844	-	79	44.615	ENSXETG00000006575	znf420	88	43.421	Xenopus_tropicalis
ENSELUG00000013844	-	79	36.975	ENSXCOG00000009665	-	82	48.696	Xiphophorus_couchianus
ENSELUG00000013844	-	90	33.073	ENSXMAG00000028625	-	90	38.728	Xiphophorus_maculatus