EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000013880 (Gene tree)
Gene ID: 105012722
Gene Symbol: polr3gla
Alias: sb:cb265|zgc:101594
Full Name: DNA-directed RNA polymerase III subunit RPC7-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5045 bases
Position: chrLG10:10166010-10171054
Accession: 105012722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000035068	RNA_pol_3_Rpc31	PF11705.8	1.4e-36	1	1
ENSELUP00000013769	RNA_pol_3_Rpc31	PF11705.8	6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000022410	-	808	XM_010873746	ENSELUP00000035068	217 (aa)	XP_010872048	UPI000577CB9B
ENSELUT00000038649	-	627	-	ENSELUP00000013769	208 (aa)	-	-

Gene Model

Click here to download ENSELUG00000013880's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG
els04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000013880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000013880	polr3gla	94	59.813	ENSELUG00000008311	polr3glb	95	59.346
ENSELUG00000013880	polr3gla	94	42.512	ENSELUG00000000740	-	95	43.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000013880	polr3gla	100	63.594	ENSAMXG00000001802	polr3glb	95	65.049	Astyanax_mexicanus
ENSELUG00000013880	polr3gla	98	57.604	ENSAMXG00000031351	polr3gla	95	62.201	Astyanax_mexicanus
ENSELUG00000013880	polr3gla	95	63.462	ENSCPBG00000007959	-	94	63.768	Chrysemys_picta_bellii
ENSELUG00000013880	polr3gla	100	66.368	ENSDARG00000012044	polr3gla	100	66.368	Danio_rerio
ENSELUG00000013880	polr3gla	97	61.611	ENSDARG00000013734	polr3glb	97	62.136	Danio_rerio
ENSELUG00000013880	polr3gla	94	63.636	ENSIPUG00000018691	polr3gla	94	63.158	Ictalurus_punctatus
ENSELUG00000013880	polr3gla	100	61.290	ENSIPUG00000003803	polr3gl	100	64.977	Ictalurus_punctatus
ENSELUG00000013880	polr3gla	100	64.091	ENSLACG00000013217	-	99	61.818	Latimeria_chalumnae
ENSELUG00000013880	polr3gla	100	63.761	ENSLOCG00000008195	polr3glb	94	62.802	Lepisosteus_oculatus
ENSELUG00000013880	polr3gla	95	62.500	ENSPSIG00000010726	-	95	62.500	Pelodiscus_sinensis
ENSELUG00000013880	polr3gla	100	62.212	ENSPNAG00000000732	polr3glb	100	61.290	Pygocentrus_nattereri