EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000014029 (Gene tree)
Gene ID: 105020497
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 12544 bases
Position: chrLG23:22430203-22442746
Accession: 105020497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000035183	YTH	PF04146.15	5.3e-41	1	1
ENSELUP00000013972	YTH	PF04146.15	5.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000022754	-	2899	XM_010887603	ENSELUP00000013972	707 (aa)	XP_010885905	UPI000577DCA6
ENSELUT00000022718	-	3043	-	ENSELUP00000035183	662 (aa)	-	-

Gene Model

Click here to download ENSELUG00000014029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014029	ythdc1	95	62.974	ENSG00000083896	YTHDC1	92	70.115	Homo_sapiens
ENSELUG00000014029	ythdc1	52	69.452	ENSAPOG00000013997	ythdc1	93	58.610	Acanthochromis_polyacanthus
ENSELUG00000014029	ythdc1	57	76.716	ENSAMEG00000005688	YTHDC1	93	61.864	Ailuropoda_melanoleuca
ENSELUG00000014029	ythdc1	73	62.774	ENSACIG00000019728	ythdc1	89	62.151	Amphilophus_citrinellus
ENSELUG00000014029	ythdc1	92	57.692	ENSAOCG00000000239	ythdc1	94	60.386	Amphiprion_ocellaris
ENSELUG00000014029	ythdc1	90	58.403	ENSAPEG00000000618	ythdc1	89	61.770	Amphiprion_percula
ENSELUG00000014029	ythdc1	89	61.242	ENSATEG00000023007	ythdc1	91	62.230	Anabas_testudineus
ENSELUG00000014029	ythdc1	93	63.318	ENSAPLG00000009921	YTHDC1	92	62.774	Anas_platyrhynchos
ENSELUG00000014029	ythdc1	95	61.619	ENSACAG00000009697	YTHDC1	93	60.000	Anolis_carolinensis
ENSELUG00000014029	ythdc1	57	77.179	ENSANAG00000001522	YTHDC1	93	61.615	Aotus_nancymaae
ENSELUG00000014029	ythdc1	92	57.249	ENSACLG00000019371	ythdc1	94	60.972	Astatotilapia_calliptera
ENSELUG00000014029	ythdc1	96	78.159	ENSAMXG00000006978	ythdc1	92	78.517	Astyanax_mexicanus
ENSELUG00000014029	ythdc1	91	60.209	ENSBTAG00000015572	YTHDC1	93	61.331	Bos_taurus
ENSELUG00000014029	ythdc1	57	77.179	ENSCJAG00000009934	YTHDC1	93	61.615	Callithrix_jacchus
ENSELUG00000014029	ythdc1	57	76.716	ENSCAFG00000002821	YTHDC1	93	62.006	Canis_familiaris
ENSELUG00000014029	ythdc1	57	76.716	ENSCAFG00020027112	YTHDC1	93	62.006	Canis_lupus_dingo
ENSELUG00000014029	ythdc1	71	61.479	ENSCHIG00000004810	YTHDC1	94	60.803	Capra_hircus
ENSELUG00000014029	ythdc1	95	63.142	ENSTSYG00000011668	YTHDC1	93	62.147	Carlito_syrichta
ENSELUG00000014029	ythdc1	92	45.972	ENSCAPG00000008722	YTHDC1	89	46.617	Cavia_aperea
ENSELUG00000014029	ythdc1	93	58.200	ENSCPOG00000010929	YTHDC1	92	57.518	Cavia_porcellus
ENSELUG00000014029	ythdc1	95	62.766	ENSCCAG00000035754	YTHDC1	93	61.790	Cebus_capucinus
ENSELUG00000014029	ythdc1	57	77.179	ENSCATG00000036320	YTHDC1	96	60.646	Cercocebus_atys
ENSELUG00000014029	ythdc1	93	63.077	ENSCLAG00000005482	YTHDC1	92	62.722	Chinchilla_lanigera
ENSELUG00000014029	ythdc1	57	76.225	ENSCSAG00000005252	YTHDC1	93	61.756	Chlorocebus_sabaeus
ENSELUG00000014029	ythdc1	94	66.190	ENSCPBG00000021965	YTHDC1	94	61.228	Chrysemys_picta_bellii
ENSELUG00000014029	ythdc1	57	77.179	ENSCANG00000004769	YTHDC1	95	60.456	Colobus_angolensis_palliatus
ENSELUG00000014029	ythdc1	93	62.482	ENSCGRG00001000816	Ythdc1	93	62.009	Cricetulus_griseus_chok1gshd
ENSELUG00000014029	ythdc1	93	62.000	ENSCGRG00000009807	Ythdc1	92	61.947	Cricetulus_griseus_crigri
ENSELUG00000014029	ythdc1	92	57.598	ENSCSEG00000020404	ythdc1	94	61.481	Cynoglossus_semilaevis
ENSELUG00000014029	ythdc1	52	72.334	ENSCVAG00000022349	ythdc1	94	59.733	Cyprinodon_variegatus
ENSELUG00000014029	ythdc1	96	74.648	ENSDARG00000051953	ythdc1	92	73.860	Danio_rerio
ENSELUG00000014029	ythdc1	95	63.959	ENSDNOG00000004949	YTHDC1	93	62.873	Dasypus_novemcinctus
ENSELUG00000014029	ythdc1	91	62.200	ENSDORG00000013045	Ythdc1	92	62.408	Dipodomys_ordii
ENSELUG00000014029	ythdc1	74	81.967	ENSETEG00000001878	YTHDC1	65	89.583	Echinops_telfairi
ENSELUG00000014029	ythdc1	57	76.716	ENSEASG00005018383	YTHDC1	93	61.864	Equus_asinus_asinus
ENSELUG00000014029	ythdc1	53	81.870	ENSECAG00000018303	YTHDC1	98	60.589	Equus_caballus
ENSELUG00000014029	ythdc1	57	75.490	ENSEEUG00000015466	YTHDC1	93	61.103	Erinaceus_europaeus
ENSELUG00000014029	ythdc1	57	77.692	ENSFCAG00000026791	YTHDC1	93	62.518	Felis_catus
ENSELUG00000014029	ythdc1	70	73.966	ENSFALG00000006581	YTHDC1	81	80.435	Ficedula_albicollis
ENSELUG00000014029	ythdc1	93	63.636	ENSFDAG00000018560	YTHDC1	92	62.815	Fukomys_damarensis
ENSELUG00000014029	ythdc1	57	52.439	ENSFHEG00000001286	ythdc1	55	52.311	Fundulus_heteroclitus
ENSELUG00000014029	ythdc1	93	64.163	ENSGALG00000035906	YTHDC1	85	63.418	Gallus_gallus
ENSELUG00000014029	ythdc1	52	68.508	ENSGACG00000015486	ythdc1	57	64.120	Gasterosteus_aculeatus
ENSELUG00000014029	ythdc1	94	65.773	ENSGAGG00000007108	YTHDC1	92	64.955	Gopherus_agassizii
ENSELUG00000014029	ythdc1	57	77.179	ENSGGOG00000021958	YTHDC1	96	60.531	Gorilla_gorilla
ENSELUG00000014029	ythdc1	92	58.136	ENSHBUG00000019288	ythdc1	93	61.152	Haplochromis_burtoni
ENSELUG00000014029	ythdc1	94	51.862	ENSHGLG00000003239	-	86	50.661	Heterocephalus_glaber_female
ENSELUG00000014029	ythdc1	95	63.927	ENSHGLG00000006319	-	92	63.104	Heterocephalus_glaber_female
ENSELUG00000014029	ythdc1	94	50.499	ENSHGLG00100008060	-	86	49.123	Heterocephalus_glaber_male
ENSELUG00000014029	ythdc1	95	63.086	ENSHGLG00100001556	-	93	61.418	Heterocephalus_glaber_male
ENSELUG00000014029	ythdc1	65	74.468	ENSHCOG00000001520	ythdc1	75	74.468	Hippocampus_comes
ENSELUG00000014029	ythdc1	96	75.587	ENSIPUG00000018136	ythdc1	92	76.480	Ictalurus_punctatus
ENSELUG00000014029	ythdc1	57	75.628	ENSSTOG00000013652	YTHDC1	93	60.839	Ictidomys_tridecemlineatus
ENSELUG00000014029	ythdc1	57	76.410	ENSJJAG00000010268	Ythdc1	92	62.312	Jaculus_jaculus
ENSELUG00000014029	ythdc1	58	64.169	ENSKMAG00000006483	ythdc1	86	69.321	Kryptolebias_marmoratus
ENSELUG00000014029	ythdc1	68	62.884	ENSLBEG00000020831	ythdc1	72	79.545	Labrus_bergylta
ENSELUG00000014029	ythdc1	88	59.812	ENSLACG00000004893	YTHDC1	92	60.150	Latimeria_chalumnae
ENSELUG00000014029	ythdc1	95	68.546	ENSLOCG00000003045	ythdc1	92	66.906	Lepisosteus_oculatus
ENSELUG00000014029	ythdc1	95	63.196	ENSLAFG00000021592	YTHDC1	100	58.226	Loxodonta_africana
ENSELUG00000014029	ythdc1	57	77.179	ENSMFAG00000031927	YTHDC1	95	60.456	Macaca_fascicularis
ENSELUG00000014029	ythdc1	57	77.179	ENSMMUG00000002265	YTHDC1	94	60.895	Macaca_mulatta
ENSELUG00000014029	ythdc1	57	77.179	ENSMNEG00000033751	YTHDC1	95	60.456	Macaca_nemestrina
ENSELUG00000014029	ythdc1	57	77.179	ENSMLEG00000042147	YTHDC1	95	60.456	Mandrillus_leucophaeus
ENSELUG00000014029	ythdc1	57	67.542	ENSMAMG00000013122	ythdc1	92	60.352	Mastacembelus_armatus
ENSELUG00000014029	ythdc1	92	57.249	ENSMZEG00005023173	ythdc1	93	60.972	Maylandia_zebra
ENSELUG00000014029	ythdc1	95	63.418	ENSMGAG00000010391	YTHDC1	92	62.590	Meleagris_gallopavo
ENSELUG00000014029	ythdc1	95	61.168	ENSMAUG00000001286	Ythdc1	93	62.009	Mesocricetus_auratus
ENSELUG00000014029	ythdc1	95	62.536	ENSMICG00000034640	YTHDC1	93	61.463	Microcebus_murinus
ENSELUG00000014029	ythdc1	95	62.709	ENSMOCG00000020201	Ythdc1	92	61.933	Microtus_ochrogaster
ENSELUG00000014029	ythdc1	64	48.240	ENSMODG00000009173	-	88	50.115	Monodelphis_domestica
ENSELUG00000014029	ythdc1	96	42.396	ENSMODG00000010076	-	59	50.701	Monodelphis_domestica
ENSELUG00000014029	ythdc1	50	52.661	ENSMODG00000004117	-	92	55.287	Monodelphis_domestica
ENSELUG00000014029	ythdc1	95	65.053	ENSMODG00000020754	-	92	63.728	Monodelphis_domestica
ENSELUG00000014029	ythdc1	90	61.120	ENSMALG00000013412	ythdc1	93	62.500	Monopterus_albus
ENSELUG00000014029	ythdc1	57	76.667	MGP_CAROLIEiJ_G0027347	Ythdc1	96	59.363	Mus_caroli
ENSELUG00000014029	ythdc1	95	62.538	ENSMUSG00000035851	Ythdc1	96	58.505	Mus_musculus
ENSELUG00000014029	ythdc1	95	62.840	MGP_PahariEiJ_G0017126	Ythdc1	96	58.505	Mus_pahari
ENSELUG00000014029	ythdc1	95	62.689	MGP_SPRETEiJ_G0028339	Ythdc1	96	58.692	Mus_spretus
ENSELUG00000014029	ythdc1	66	81.870	ENSMPUG00000001743	YTHDC1	61	80.163	Mustela_putorius_furo
ENSELUG00000014029	ythdc1	93	63.964	ENSMLUG00000016300	YTHDC1	92	62.428	Myotis_lucifugus
ENSELUG00000014029	ythdc1	61	56.092	ENSNGAG00000024000	Ythdc1	93	56.782	Nannospalax_galili
ENSELUG00000014029	ythdc1	57	64.115	ENSNBRG00000007663	ythdc1	71	67.943	Neolamprologus_brichardi
ENSELUG00000014029	ythdc1	93	61.391	ENSNLEG00000009202	YTHDC1	95	60.000	Nomascus_leucogenys
ENSELUG00000014029	ythdc1	72	66.096	ENSMEUG00000007128	YTHDC1	67	64.375	Notamacropus_eugenii
ENSELUG00000014029	ythdc1	71	80.822	ENSOPRG00000008986	YTHDC1	66	77.812	Ochotona_princeps
ENSELUG00000014029	ythdc1	95	63.623	ENSODEG00000001715	YTHDC1	93	62.482	Octodon_degus
ENSELUG00000014029	ythdc1	92	79.545	ENSONIG00000012651	ythdc1	91	72.000	Oreochromis_niloticus
ENSELUG00000014029	ythdc1	88	56.815	ENSOANG00000014398	YTHDC1	50	78.457	Ornithorhynchus_anatinus
ENSELUG00000014029	ythdc1	92	57.228	ENSORLG00000030544	ythdc1	94	60.417	Oryzias_latipes
ENSELUG00000014029	ythdc1	92	56.781	ENSORLG00020019316	ythdc1	94	59.704	Oryzias_latipes_hni
ENSELUG00000014029	ythdc1	92	59.581	ENSOMEG00000000551	ythdc1	94	58.406	Oryzias_melastigma
ENSELUG00000014029	ythdc1	95	63.368	ENSOGAG00000003362	YTHDC1	93	62.411	Otolemur_garnettii
ENSELUG00000014029	ythdc1	57	75.735	ENSOARG00000008633	YTHDC1	93	61.331	Ovis_aries
ENSELUG00000014029	ythdc1	95	62.974	ENSPPAG00000041315	YTHDC1	96	60.646	Pan_paniscus
ENSELUG00000014029	ythdc1	57	77.692	ENSPPRG00000011979	YTHDC1	92	63.570	Panthera_pardus
ENSELUG00000014029	ythdc1	57	77.179	ENSPTIG00000015527	YTHDC1	92	63.181	Panthera_tigris_altaica
ENSELUG00000014029	ythdc1	95	62.974	ENSPTRG00000016105	YTHDC1	96	60.646	Pan_troglodytes
ENSELUG00000014029	ythdc1	57	77.179	ENSPANG00000021590	YTHDC1	95	60.491	Papio_anubis
ENSELUG00000014029	ythdc1	96	71.687	ENSPKIG00000018497	ythdc1	93	71.930	Paramormyrops_kingsleyae
ENSELUG00000014029	ythdc1	93	63.014	ENSPSIG00000002782	YTHDC1	92	61.314	Pelodiscus_sinensis
ENSELUG00000014029	ythdc1	60	61.329	ENSPMGG00000000970	-	77	63.746	Periophthalmus_magnuspinnatus
ENSELUG00000014029	ythdc1	91	63.050	ENSPEMG00000013850	Ythdc1	92	62.038	Peromyscus_maniculatus_bairdii
ENSELUG00000014029	ythdc1	95	65.008	ENSPCIG00000006870	YTHDC1	92	64.540	Phascolarctos_cinereus
ENSELUG00000014029	ythdc1	89	61.345	ENSPFOG00000013404	ythdc1	94	60.389	Poecilia_formosa
ENSELUG00000014029	ythdc1	51	72.674	ENSPLAG00000011079	ythdc1	85	69.952	Poecilia_latipinna
ENSELUG00000014029	ythdc1	89	61.345	ENSPMEG00000009238	ythdc1	94	60.389	Poecilia_mexicana
ENSELUG00000014029	ythdc1	51	72.566	ENSPREG00000016973	ythdc1	93	57.251	Poecilia_reticulata
ENSELUG00000014029	ythdc1	68	70.265	ENSPPYG00000014726	YTHDC1	66	73.165	Pongo_abelii
ENSELUG00000014029	ythdc1	78	67.907	ENSPCAG00000009607	YTHDC1	77	66.109	Procavia_capensis
ENSELUG00000014029	ythdc1	95	60.494	ENSPCOG00000019105	YTHDC1	92	60.030	Propithecus_coquereli
ENSELUG00000014029	ythdc1	57	73.284	ENSPVAG00000015551	YTHDC1	93	59.520	Pteropus_vampyrus
ENSELUG00000014029	ythdc1	92	57.249	ENSPNYG00000011687	ythdc1	94	60.972	Pundamilia_nyererei
ENSELUG00000014029	ythdc1	96	79.095	ENSPNAG00000028365	ythdc1	92	77.912	Pygocentrus_nattereri
ENSELUG00000014029	ythdc1	57	74.279	ENSRNOG00000001996	Ythdc1	93	60.335	Rattus_norvegicus
ENSELUG00000014029	ythdc1	57	75.121	ENSRBIG00000028279	YTHDC1	95	59.733	Rhinopithecus_bieti
ENSELUG00000014029	ythdc1	57	77.179	ENSRROG00000035028	YTHDC1	95	60.456	Rhinopithecus_roxellana
ENSELUG00000014029	ythdc1	57	77.179	ENSSBOG00000022353	YTHDC1	95	60.456	Saimiri_boliviensis_boliviensis
ENSELUG00000014029	ythdc1	95	64.448	ENSSHAG00000002538	YTHDC1	92	63.150	Sarcophilus_harrisii
ENSELUG00000014029	ythdc1	96	73.125	ENSSFOG00015003298	ythdc1	92	73.182	Scleropages_formosus
ENSELUG00000014029	ythdc1	51	71.720	ENSSMAG00000009086	ythdc1	94	59.881	Scophthalmus_maximus
ENSELUG00000014029	ythdc1	57	67.703	ENSSDUG00000022008	ythdc1	94	61.856	Seriola_dumerili
ENSELUG00000014029	ythdc1	57	67.703	ENSSLDG00000007926	ythdc1	94	61.708	Seriola_lalandi_dorsalis
ENSELUG00000014029	ythdc1	57	75.980	ENSSARG00000010960	YTHDC1	89	68.401	Sorex_araneus
ENSELUG00000014029	ythdc1	95	63.166	ENSSPUG00000009357	YTHDC1	97	60.557	Sphenodon_punctatus
ENSELUG00000014029	ythdc1	92	59.118	ENSSPAG00000011449	ythdc1	94	61.209	Stegastes_partitus
ENSELUG00000014029	ythdc1	57	76.716	ENSSSCG00000035505	YTHDC1	93	61.593	Sus_scrofa
ENSELUG00000014029	ythdc1	95	64.618	ENSTGUG00000004452	-	92	62.734	Taeniopygia_guttata
ENSELUG00000014029	ythdc1	92	56.925	ENSTNIG00000013243	ythdc1	78	66.972	Tetraodon_nigroviridis
ENSELUG00000014029	ythdc1	95	61.912	ENSTBEG00000011546	YTHDC1	92	60.262	Tupaia_belangeri
ENSELUG00000014029	ythdc1	57	75.490	ENSTTRG00000005083	YTHDC1	93	60.962	Tursiops_truncatus
ENSELUG00000014029	ythdc1	85	62.893	ENSUAMG00000010388	YTHDC1	91	62.303	Ursus_americanus
ENSELUG00000014029	ythdc1	93	56.753	ENSUMAG00000013668	YTHDC1	90	56.287	Ursus_maritimus
ENSELUG00000014029	ythdc1	95	63.198	ENSVPAG00000009040	YTHDC1	92	63.081	Vicugna_pacos
ENSELUG00000014029	ythdc1	57	76.716	ENSVVUG00000005387	YTHDC1	95	59.084	Vulpes_vulpes
ENSELUG00000014029	ythdc1	93	63.419	ENSXETG00000017960	ythdc1	91	63.567	Xenopus_tropicalis
ENSELUG00000014029	ythdc1	51	60.081	ENSXCOG00000000530	ythdc1	82	61.694	Xiphophorus_couchianus
ENSELUG00000014029	ythdc1	92	57.143	ENSXMAG00000005196	ythdc1	94	59.496	Xiphophorus_maculatus