EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSELUG00000014078 (Gene tree)
Gene ID
105011642
Gene Symbol
rexo1
Alias
fb77b11|si:dkey-45m5.5|wu:fb77b11
Full Name
RNA exonuclease 1 homolog
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
19095 bases
Position
chrLG08:14746315-14765409
Accession
105011642
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000014000RNase_TPF00929.242.4e-0511
ENSELUP00000035192RNase_TPF00929.242.4e-0511
ENSELUP00000014031RNase_TPF00929.242.4e-0511
ENSELUP00000035186RNase_TPF00929.240.0002711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000038750-4014-ENSELUP000000140311315 (aa)--
ENSELUT00000022672-5839XM_010871838ENSELUP000000140001307 (aa)XP_010870140UPI0005781185
ENSELUT00000038726-4139-ENSELUP000000351861270 (aa)--
ENSELUT00000022645-4250-ENSELUP000000351921307 (aa)-UPI0005781185
Gene Model
Click here to download ENSELUG00000014078's gene model file
Pathways
Pathway IDPathway NameSource
els03008Ribosome biogenesis in eukaryotesKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014078's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000014078rexo110058.112ENSAMXG00000016463rexo110059.259Astyanax_mexicanus
ENSELUG00000014078rexo110056.366ENSCSEG00000016683rexo110055.622Cynoglossus_semilaevis
ENSELUG00000014078rexo19463.870ENSGMOG00000011119rexo19862.595Gadus_morhua
ENSELUG00000014078rexo110054.374ENSLOCG00000001203rexo110054.346Lepisosteus_oculatus
ENSELUG00000014078rexo110058.744ENSMMOG00000006931rexo110058.538Mola_mola
ENSELUG00000014078rexo110058.762ENSPNAG00000025432rexo110059.345Pygocentrus_nattereri
ENSELUG00000014078rexo19957.988ENSSFOG00015001227rexo19957.910Scleropages_formosus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us