EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000014085 (Gene tree)
Gene ID: 105018219
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 27982 bases
Position: chrLG19:8873798-8901779
Accession: 105018219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000035211	Not1	PF04054.15	7.1e-152	1	1
ENSELUP00000013868	Not1	PF04054.15	2.6e-133	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000038697	-	6918	-	ENSELUP00000013868	2305 (aa)	-	-
ENSELUT00000022584	-	10995	XM_010883468	ENSELUP00000035211	2408 (aa)	XP_010881770	-

Gene Model

Click here to download ENSELUG00000014085's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014085	cnot1	100	89.685	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSELUG00000014085	cnot1	97	96.730	ENSAPOG00000005042	cnot1	100	96.730	Acanthochromis_polyacanthus
ENSELUG00000014085	cnot1	100	89.727	ENSAMEG00000017298	CNOT1	100	90.046	Ailuropoda_melanoleuca
ENSELUG00000014085	cnot1	90	93.578	ENSACIG00000016003	cnot1	100	93.578	Amphilophus_citrinellus
ENSELUG00000014085	cnot1	100	95.798	ENSAPEG00000022342	cnot1	100	95.798	Amphiprion_percula
ENSELUG00000014085	cnot1	97	96.866	ENSATEG00000012892	cnot1	100	96.866	Anabas_testudineus
ENSELUG00000014085	cnot1	100	89.137	ENSAPLG00000007162	CNOT1	100	89.380	Anas_platyrhynchos
ENSELUG00000014085	cnot1	90	89.078	ENSACAG00000001602	CNOT1	98	89.440	Anolis_carolinensis
ENSELUG00000014085	cnot1	100	87.059	ENSANAG00000038198	CNOT1	100	87.689	Aotus_nancymaae
ENSELUG00000014085	cnot1	97	96.866	ENSACLG00000014234	cnot1	100	96.866	Astatotilapia_calliptera
ENSELUG00000014085	cnot1	100	94.647	ENSAMXG00000013170	cnot1	100	94.647	Astyanax_mexicanus
ENSELUG00000014085	cnot1	100	89.541	ENSBTAG00000020782	CNOT1	100	92.529	Bos_taurus
ENSELUG00000014085	cnot1	79	40.640	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSELUG00000014085	cnot1	100	89.376	ENSCJAG00000011318	CNOT1	100	92.096	Callithrix_jacchus
ENSELUG00000014085	cnot1	100	89.109	ENSCAFG00000008426	CNOT1	100	89.426	Canis_familiaris
ENSELUG00000014085	cnot1	100	89.700	ENSCAFG00020010156	CNOT1	100	90.343	Canis_lupus_dingo
ENSELUG00000014085	cnot1	100	89.541	ENSCHIG00000010452	CNOT1	100	89.859	Capra_hircus
ENSELUG00000014085	cnot1	100	89.500	ENSTSYG00000006888	CNOT1	100	89.818	Carlito_syrichta
ENSELUG00000014085	cnot1	100	86.151	ENSCPOG00000013026	CNOT1	100	86.051	Cavia_porcellus
ENSELUG00000014085	cnot1	100	88.218	ENSCCAG00000026333	CNOT1	100	88.121	Cebus_capucinus
ENSELUG00000014085	cnot1	100	89.458	ENSCATG00000032625	CNOT1	100	89.776	Cercocebus_atys
ENSELUG00000014085	cnot1	100	89.500	ENSCLAG00000006289	CNOT1	100	89.818	Chinchilla_lanigera
ENSELUG00000014085	cnot1	100	89.458	ENSCSAG00000004731	CNOT1	100	89.776	Chlorocebus_sabaeus
ENSELUG00000014085	cnot1	81	97.727	ENSCHOG00000009712	CNOT1	83	97.527	Choloepus_hoffmanni
ENSELUG00000014085	cnot1	98	88.743	ENSCPBG00000026222	CNOT1	98	92.015	Chrysemys_picta_bellii
ENSELUG00000014085	cnot1	100	57.841	ENSCING00000009149	-	100	57.697	Ciona_intestinalis
ENSELUG00000014085	cnot1	89	61.832	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSELUG00000014085	cnot1	100	88.054	ENSCANG00000040534	CNOT1	100	87.957	Colobus_angolensis_palliatus
ENSELUG00000014085	cnot1	100	89.367	ENSCGRG00001016365	Cnot1	100	89.611	Cricetulus_griseus_chok1gshd
ENSELUG00000014085	cnot1	100	89.367	ENSCGRG00000001714	Cnot1	100	89.611	Cricetulus_griseus_crigri
ENSELUG00000014085	cnot1	100	88.645	ENSCVAG00000018930	cnot1	100	88.447	Cyprinodon_variegatus
ENSELUG00000014085	cnot1	100	93.615	ENSDARG00000004174	cnot1	100	93.615	Danio_rerio
ENSELUG00000014085	cnot1	100	87.552	ENSDNOG00000013250	CNOT1	100	87.712	Dasypus_novemcinctus
ENSELUG00000014085	cnot1	99	50.096	FBgn0085436	Not1	99	47.298	Drosophila_melanogaster
ENSELUG00000014085	cnot1	84	91.825	ENSETEG00000012806	CNOT1	84	91.825	Echinops_telfairi
ENSELUG00000014085	cnot1	81	74.600	ENSEBUG00000011534	cnot1	95	74.112	Eptatretus_burgeri
ENSELUG00000014085	cnot1	97	92.222	ENSEASG00005005819	CNOT1	100	92.529	Equus_asinus_asinus
ENSELUG00000014085	cnot1	100	89.500	ENSECAG00000009889	CNOT1	100	89.776	Equus_caballus
ENSELUG00000014085	cnot1	89	87.752	ENSEEUG00000006015	CNOT1	90	88.345	Erinaceus_europaeus
ENSELUG00000014085	cnot1	100	89.242	ENSFCAG00000025155	CNOT1	100	89.558	Felis_catus
ENSELUG00000014085	cnot1	100	89.284	ENSFALG00000007285	CNOT1	100	89.528	Ficedula_albicollis
ENSELUG00000014085	cnot1	100	89.458	ENSFDAG00000013399	CNOT1	100	89.776	Fukomys_damarensis
ENSELUG00000014085	cnot1	100	92.721	ENSFHEG00000020574	cnot1	100	92.766	Fundulus_heteroclitus
ENSELUG00000014085	cnot1	90	94.926	ENSGMOG00000012864	cnot1	100	95.157	Gadus_morhua
ENSELUG00000014085	cnot1	100	89.160	ENSGALG00000002301	CNOT1	100	89.404	Gallus_gallus
ENSELUG00000014085	cnot1	100	93.485	ENSGAFG00000015005	cnot1	100	93.785	Gambusia_affinis
ENSELUG00000014085	cnot1	90	94.929	ENSGACG00000002606	cnot1	100	96.690	Gasterosteus_aculeatus
ENSELUG00000014085	cnot1	100	89.491	ENSGAGG00000022646	CNOT1	100	90.947	Gopherus_agassizii
ENSELUG00000014085	cnot1	100	89.500	ENSGGOG00000009547	CNOT1	100	89.818	Gorilla_gorilla
ENSELUG00000014085	cnot1	97	96.866	ENSHBUG00000001729	cnot1	100	96.866	Haplochromis_burtoni
ENSELUG00000014085	cnot1	100	89.376	ENSHGLG00000014322	CNOT1	100	89.694	Heterocephalus_glaber_female
ENSELUG00000014085	cnot1	100	93.427	ENSHCOG00000006501	cnot1	100	93.675	Hippocampus_comes
ENSELUG00000014085	cnot1	100	93.785	ENSIPUG00000011915	cnot1	100	93.785	Ictalurus_punctatus
ENSELUG00000014085	cnot1	100	89.661	ENSSTOG00000005490	CNOT1	100	89.607	Ictidomys_tridecemlineatus
ENSELUG00000014085	cnot1	100	88.838	ENSJJAG00000000633	Cnot1	100	89.156	Jaculus_jaculus
ENSELUG00000014085	cnot1	100	93.667	ENSKMAG00000006149	cnot1	100	93.750	Kryptolebias_marmoratus
ENSELUG00000014085	cnot1	95	94.828	ENSLBEG00000004740	cnot1	100	94.828	Labrus_bergylta
ENSELUG00000014085	cnot1	100	90.774	ENSLACG00000010869	CNOT1	100	90.439	Latimeria_chalumnae
ENSELUG00000014085	cnot1	100	94.362	ENSLOCG00000006324	cnot1	100	93.986	Lepisosteus_oculatus
ENSELUG00000014085	cnot1	100	89.343	ENSLAFG00000000098	CNOT1	100	89.661	Loxodonta_africana
ENSELUG00000014085	cnot1	100	89.685	ENSMFAG00000035888	CNOT1	100	90.004	Macaca_fascicularis
ENSELUG00000014085	cnot1	100	89.417	ENSMMUG00000014625	CNOT1	100	89.735	Macaca_mulatta
ENSELUG00000014085	cnot1	100	87.016	ENSMNEG00000031820	CNOT1	100	89.454	Macaca_nemestrina
ENSELUG00000014085	cnot1	100	89.021	ENSMLEG00000040933	CNOT1	100	89.657	Mandrillus_leucophaeus
ENSELUG00000014085	cnot1	100	94.082	ENSMAMG00000016524	cnot1	100	94.297	Mastacembelus_armatus
ENSELUG00000014085	cnot1	97	96.866	ENSMZEG00005016210	cnot1	100	96.866	Maylandia_zebra
ENSELUG00000014085	cnot1	100	89.428	ENSMGAG00000001908	CNOT1	100	89.672	Meleagris_gallopavo
ENSELUG00000014085	cnot1	100	89.570	ENSMICG00000007071	CNOT1	100	89.942	Microcebus_murinus
ENSELUG00000014085	cnot1	100	89.293	ENSMOCG00000017969	Cnot1	100	89.570	Microtus_ochrogaster
ENSELUG00000014085	cnot1	97	93.597	ENSMMOG00000019134	cnot1	100	93.597	Mola_mola
ENSELUG00000014085	cnot1	100	89.201	ENSMODG00000014199	CNOT1	100	89.574	Monodelphis_domestica
ENSELUG00000014085	cnot1	100	95.195	ENSMALG00000008645	cnot1	100	95.195	Monopterus_albus
ENSELUG00000014085	cnot1	95	96.190	MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	Mus_caroli
ENSELUG00000014085	cnot1	100	89.635	ENSMUSG00000036550	Cnot1	100	89.913	Mus_musculus
ENSELUG00000014085	cnot1	100	89.376	MGP_PahariEiJ_G0023028	Cnot1	100	89.652	Mus_pahari
ENSELUG00000014085	cnot1	100	89.334	MGP_SPRETEiJ_G0032549	Cnot1	100	89.611	Mus_spretus
ENSELUG00000014085	cnot1	100	89.500	ENSMPUG00000004830	CNOT1	100	89.818	Mustela_putorius_furo
ENSELUG00000014085	cnot1	100	89.706	ENSMLUG00000003728	CNOT1	100	89.611	Myotis_lucifugus
ENSELUG00000014085	cnot1	100	89.293	ENSNGAG00000018628	Cnot1	100	89.611	Nannospalax_galili
ENSELUG00000014085	cnot1	94	96.866	ENSNBRG00000019358	cnot1	100	96.866	Neolamprologus_brichardi
ENSELUG00000014085	cnot1	100	89.495	ENSNLEG00000003566	CNOT1	100	89.776	Nomascus_leucogenys
ENSELUG00000014085	cnot1	84	98.444	ENSMEUG00000006145	CNOT1	83	98.444	Notamacropus_eugenii
ENSELUG00000014085	cnot1	86	97.778	ENSOPRG00000005604	CNOT1	85	97.778	Ochotona_princeps
ENSELUG00000014085	cnot1	100	89.458	ENSODEG00000016337	CNOT1	100	89.776	Octodon_degus
ENSELUG00000014085	cnot1	100	94.159	ENSONIG00000007358	cnot1	100	94.118	Oreochromis_niloticus
ENSELUG00000014085	cnot1	90	89.561	ENSOANG00000012109	CNOT1	99	89.977	Ornithorhynchus_anatinus
ENSELUG00000014085	cnot1	100	89.500	ENSOCUG00000006911	CNOT1	100	89.818	Oryctolagus_cuniculus
ENSELUG00000014085	cnot1	100	93.375	ENSORLG00000013734	cnot1	100	93.502	Oryzias_latipes
ENSELUG00000014085	cnot1	100	91.629	ENSORLG00020017012	cnot1	100	91.508	Oryzias_latipes_hni
ENSELUG00000014085	cnot1	100	91.587	ENSORLG00015007091	cnot1	100	91.466	Oryzias_latipes_hsok
ENSELUG00000014085	cnot1	100	91.222	ENSOMEG00000015124	cnot1	100	91.222	Oryzias_melastigma
ENSELUG00000014085	cnot1	100	89.657	ENSOGAG00000000543	CNOT1	100	89.942	Otolemur_garnettii
ENSELUG00000014085	cnot1	100	89.541	ENSOARG00000001567	CNOT1	100	89.859	Ovis_aries
ENSELUG00000014085	cnot1	100	89.458	ENSPPAG00000022013	CNOT1	100	89.776	Pan_paniscus
ENSELUG00000014085	cnot1	100	89.500	ENSPPRG00000004867	CNOT1	100	89.818	Panthera_pardus
ENSELUG00000014085	cnot1	100	89.500	ENSPTIG00000012589	CNOT1	100	89.818	Panthera_tigris_altaica
ENSELUG00000014085	cnot1	100	89.200	ENSPTRG00000008183	CNOT1	100	89.517	Pan_troglodytes
ENSELUG00000014085	cnot1	100	86.702	ENSPANG00000020901	CNOT1	100	86.603	Papio_anubis
ENSELUG00000014085	cnot1	100	94.456	ENSPKIG00000023538	CNOT1	100	94.413	Paramormyrops_kingsleyae
ENSELUG00000014085	cnot1	97	92.360	ENSPKIG00000002914	CNOT1	99	92.360	Paramormyrops_kingsleyae
ENSELUG00000014085	cnot1	100	89.284	ENSPSIG00000005499	CNOT1	100	89.528	Pelodiscus_sinensis
ENSELUG00000014085	cnot1	100	78.873	ENSPMAG00000009381	cnot1	100	78.716	Petromyzon_marinus
ENSELUG00000014085	cnot1	100	90.815	ENSPCIG00000007343	CNOT1	100	92.720	Phascolarctos_cinereus
ENSELUG00000014085	cnot1	99	92.765	ENSPFOG00000003497	cnot1	100	93.057	Poecilia_formosa
ENSELUG00000014085	cnot1	95	94.253	ENSPLAG00000014018	cnot1	100	94.253	Poecilia_latipinna
ENSELUG00000014085	cnot1	95	94.253	ENSPMEG00000005868	cnot1	100	94.253	Poecilia_mexicana
ENSELUG00000014085	cnot1	95	94.253	ENSPREG00000018793	cnot1	100	94.253	Poecilia_reticulata
ENSELUG00000014085	cnot1	100	89.500	ENSPPYG00000007410	CNOT1	100	89.818	Pongo_abelii
ENSELUG00000014085	cnot1	87	92.021	ENSPCAG00000003241	CNOT1	88	92.021	Procavia_capensis
ENSELUG00000014085	cnot1	100	89.270	ENSPCOG00000027139	CNOT1	100	89.641	Propithecus_coquereli
ENSELUG00000014085	cnot1	97	98.286	ENSPVAG00000004243	CNOT1	98	98.286	Pteropus_vampyrus
ENSELUG00000014085	cnot1	97	96.866	ENSPNYG00000012919	cnot1	100	96.866	Pundamilia_nyererei
ENSELUG00000014085	cnot1	100	94.843	ENSPNAG00000000246	cnot1	100	94.886	Pygocentrus_nattereri
ENSELUG00000014085	cnot1	100	89.334	ENSRNOG00000012271	Cnot1	100	89.611	Rattus_norvegicus
ENSELUG00000014085	cnot1	100	87.345	ENSRBIG00000044598	CNOT1	100	87.660	Rhinopithecus_bieti
ENSELUG00000014085	cnot1	100	89.458	ENSRROG00000000906	CNOT1	100	89.776	Rhinopithecus_roxellana
ENSELUG00000014085	cnot1	100	85.609	ENSSBOG00000029155	CNOT1	100	86.032	Saimiri_boliviensis_boliviensis
ENSELUG00000014085	cnot1	100	89.537	ENSSHAG00000012187	CNOT1	100	89.495	Sarcophilus_harrisii
ENSELUG00000014085	cnot1	100	92.225	ENSSFOG00015017614	cnot1	100	91.901	Scleropages_formosus
ENSELUG00000014085	cnot1	100	94.166	ENSSMAG00000013844	cnot1	100	96.866	Scophthalmus_maximus
ENSELUG00000014085	cnot1	97	96.730	ENSSDUG00000021491	cnot1	100	96.730	Seriola_dumerili
ENSELUG00000014085	cnot1	100	95.449	ENSSLDG00000014816	cnot1	100	96.730	Seriola_lalandi_dorsalis
ENSELUG00000014085	cnot1	83	95.745	ENSSARG00000000762	CNOT1	88	95.745	Sorex_araneus
ENSELUG00000014085	cnot1	100	95.456	ENSSPAG00000018802	cnot1	100	95.628	Stegastes_partitus
ENSELUG00000014085	cnot1	100	90.421	ENSSSCG00000002799	CNOT1	100	92.529	Sus_scrofa
ENSELUG00000014085	cnot1	100	89.298	ENSTGUG00000005919	CNOT1	100	89.541	Taeniopygia_guttata
ENSELUG00000014085	cnot1	100	92.079	ENSTNIG00000018706	cnot1	100	91.997	Tetraodon_nigroviridis
ENSELUG00000014085	cnot1	82	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSELUG00000014085	cnot1	95	88.744	ENSTTRG00000008460	CNOT1	95	88.610	Tursiops_truncatus
ENSELUG00000014085	cnot1	100	89.500	ENSUAMG00000009251	CNOT1	100	89.818	Ursus_americanus
ENSELUG00000014085	cnot1	100	89.500	ENSUMAG00000021291	CNOT1	100	89.818	Ursus_maritimus
ENSELUG00000014085	cnot1	97	90.466	ENSVPAG00000008846	CNOT1	97	90.466	Vicugna_pacos
ENSELUG00000014085	cnot1	100	89.700	ENSVVUG00000024037	CNOT1	100	90.343	Vulpes_vulpes
ENSELUG00000014085	cnot1	100	84.533	ENSXETG00000015900	cnot1	100	84.431	Xenopus_tropicalis
ENSELUG00000014085	cnot1	100	93.528	ENSXCOG00000013552	cnot1	100	93.828	Xiphophorus_couchianus
ENSELUG00000014085	cnot1	100	93.571	ENSXMAG00000006031	cnot1	100	93.871	Xiphophorus_maculatus