EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000014307 (Gene tree)
Gene ID: 105030338
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5914 bases
Position: chrLG11:247577-253490
Accession: 105030338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000014266	PseudoU_synth_2	PF00849.22	1.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000038855	-	1251	XM_010904154	ENSELUP00000014266	344 (aa)	XP_010902456	UPI000577429D

Gene Model

Click here to download ENSELUG00000014307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014307	rpusd1	88	51.084	ENSG00000007376	RPUSD1	100	64.286	Homo_sapiens
ENSELUG00000014307	rpusd1	90	72.078	ENSAPOG00000022221	rpusd1	99	71.429	Acanthochromis_polyacanthus
ENSELUG00000014307	rpusd1	88	53.698	ENSAMEG00000007461	RPUSD1	84	60.236	Ailuropoda_melanoleuca
ENSELUG00000014307	rpusd1	90	69.677	ENSACIG00000015863	rpusd1	100	69.032	Amphilophus_citrinellus
ENSELUG00000014307	rpusd1	89	72.876	ENSAOCG00000021975	rpusd1	96	71.895	Amphiprion_ocellaris
ENSELUG00000014307	rpusd1	89	73.203	ENSAPEG00000001316	rpusd1	96	72.222	Amphiprion_percula
ENSELUG00000014307	rpusd1	89	72.222	ENSATEG00000002984	rpusd1	99	71.569	Anabas_testudineus
ENSELUG00000014307	rpusd1	69	56.846	ENSAPLG00000012316	RPUSD1	98	54.167	Anas_platyrhynchos
ENSELUG00000014307	rpusd1	88	60.197	ENSACAG00000008953	RPUSD1	99	57.878	Anolis_carolinensis
ENSELUG00000014307	rpusd1	88	53.722	ENSANAG00000024709	RPUSD1	81	60.236	Aotus_nancymaae
ENSELUG00000014307	rpusd1	90	71.061	ENSACLG00000013692	rpusd1	100	69.775	Astatotilapia_calliptera
ENSELUG00000014307	rpusd1	89	66.340	ENSAMXG00000019802	rpusd1	100	66.013	Astyanax_mexicanus
ENSELUG00000014307	rpusd1	88	57.377	ENSBTAG00000000179	RPUSD1	82	62.992	Bos_taurus
ENSELUG00000014307	rpusd1	88	53.722	ENSCJAG00000012253	RPUSD1	81	59.843	Callithrix_jacchus
ENSELUG00000014307	rpusd1	88	53.770	ENSCAFG00000019614	RPUSD1	84	60.630	Canis_familiaris
ENSELUG00000014307	rpusd1	88	53.770	ENSCAFG00020008891	RPUSD1	84	60.630	Canis_lupus_dingo
ENSELUG00000014307	rpusd1	88	57.377	ENSCHIG00000012872	RPUSD1	82	62.992	Capra_hircus
ENSELUG00000014307	rpusd1	88	53.770	ENSTSYG00000036934	RPUSD1	79	70.874	Carlito_syrichta
ENSELUG00000014307	rpusd1	88	55.082	ENSCAPG00000014219	RPUSD1	83	60.630	Cavia_aperea
ENSELUG00000014307	rpusd1	88	55.082	ENSCPOG00000034604	RPUSD1	83	60.630	Cavia_porcellus
ENSELUG00000014307	rpusd1	88	54.045	ENSCCAG00000034385	RPUSD1	81	60.630	Cebus_capucinus
ENSELUG00000014307	rpusd1	88	50.774	ENSCATG00000042983	RPUSD1	98	53.398	Cercocebus_atys
ENSELUG00000014307	rpusd1	88	54.426	ENSCLAG00000013966	RPUSD1	98	53.770	Chinchilla_lanigera
ENSELUG00000014307	rpusd1	88	53.074	ENSCSAG00000012121	RPUSD1	98	53.074	Chlorocebus_sabaeus
ENSELUG00000014307	rpusd1	88	61.765	ENSCPBG00000021101	RPUSD1	99	60.855	Chrysemys_picta_bellii
ENSELUG00000014307	rpusd1	73	59.449	ENSCANG00000028576	RPUSD1	79	71.845	Colobus_angolensis_palliatus
ENSELUG00000014307	rpusd1	88	55.195	ENSCGRG00001014253	Rpusd1	84	60.630	Cricetulus_griseus_chok1gshd
ENSELUG00000014307	rpusd1	88	55.195	ENSCGRG00000017995	Rpusd1	84	60.630	Cricetulus_griseus_crigri
ENSELUG00000014307	rpusd1	89	69.608	ENSCSEG00000018512	rpusd1	100	68.627	Cynoglossus_semilaevis
ENSELUG00000014307	rpusd1	90	71.104	ENSCVAG00000022746	rpusd1	100	69.745	Cyprinodon_variegatus
ENSELUG00000014307	rpusd1	88	66.118	ENSDARG00000060192	rpusd1	99	66.230	Danio_rerio
ENSELUG00000014307	rpusd1	88	54.098	ENSDNOG00000003721	RPUSD1	85	58.935	Dasypus_novemcinctus
ENSELUG00000014307	rpusd1	88	53.115	ENSDORG00000026656	Rpusd1	84	60.236	Dipodomys_ordii
ENSELUG00000014307	rpusd1	86	45.833	ENSEBUG00000008767	rpusd1	84	49.275	Eptatretus_burgeri
ENSELUG00000014307	rpusd1	92	50.920	ENSEASG00005018421	RPUSD1	63	57.303	Equus_asinus_asinus
ENSELUG00000014307	rpusd1	88	54.754	ENSFCAG00000010359	RPUSD1	77	73.529	Felis_catus
ENSELUG00000014307	rpusd1	88	63.158	ENSFALG00000003211	RPUSD1	99	62.171	Ficedula_albicollis
ENSELUG00000014307	rpusd1	88	54.426	ENSFDAG00000013398	RPUSD1	83	59.843	Fukomys_damarensis
ENSELUG00000014307	rpusd1	90	71.104	ENSFHEG00000004736	rpusd1	100	71.429	Fundulus_heteroclitus
ENSELUG00000014307	rpusd1	88	69.307	ENSGMOG00000010756	rpusd1	98	69.307	Gadus_morhua
ENSELUG00000014307	rpusd1	88	61.184	ENSGALG00000005315	RPUSD1	99	60.526	Gallus_gallus
ENSELUG00000014307	rpusd1	90	71.104	ENSGAFG00000009886	rpusd1	100	69.010	Gambusia_affinis
ENSELUG00000014307	rpusd1	88	73.026	ENSGACG00000014276	rpusd1	98	73.026	Gasterosteus_aculeatus
ENSELUG00000014307	rpusd1	88	60.458	ENSGAGG00000004181	RPUSD1	99	59.539	Gopherus_agassizii
ENSELUG00000014307	rpusd1	88	51.543	ENSGGOG00000013997	RPUSD1	79	72.816	Gorilla_gorilla
ENSELUG00000014307	rpusd1	90	71.383	ENSHBUG00000023728	rpusd1	100	70.096	Haplochromis_burtoni
ENSELUG00000014307	rpusd1	88	53.770	ENSHGLG00000002595	RPUSD1	83	59.843	Heterocephalus_glaber_female
ENSELUG00000014307	rpusd1	88	53.770	ENSHGLG00100014303	RPUSD1	83	59.843	Heterocephalus_glaber_male
ENSELUG00000014307	rpusd1	89	67.320	ENSHCOG00000002390	rpusd1	100	66.667	Hippocampus_comes
ENSELUG00000014307	rpusd1	88	66.337	ENSIPUG00000001570	rpusd1	99	65.161	Ictalurus_punctatus
ENSELUG00000014307	rpusd1	88	55.738	ENSSTOG00000004276	RPUSD1	83	61.417	Ictidomys_tridecemlineatus
ENSELUG00000014307	rpusd1	88	53.770	ENSJJAG00000015696	Rpusd1	84	60.236	Jaculus_jaculus
ENSELUG00000014307	rpusd1	89	69.508	ENSKMAG00000017287	rpusd1	99	69.677	Kryptolebias_marmoratus
ENSELUG00000014307	rpusd1	89	72.549	ENSLBEG00000013354	RPUSD1	99	71.895	Labrus_bergylta
ENSELUG00000014307	rpusd1	89	72.549	ENSLBEG00000022502	rpusd1	99	71.895	Labrus_bergylta
ENSELUG00000014307	rpusd1	88	60.855	ENSLACG00000008869	RPUSD1	99	59.211	Latimeria_chalumnae
ENSELUG00000014307	rpusd1	63	80.093	ENSLOCG00000005682	rpusd1	95	80.097	Lepisosteus_oculatus
ENSELUG00000014307	rpusd1	88	52.459	ENSLAFG00000002115	RPUSD1	84	59.055	Loxodonta_africana
ENSELUG00000014307	rpusd1	88	50.774	ENSMFAG00000003961	RPUSD1	98	53.398	Macaca_fascicularis
ENSELUG00000014307	rpusd1	88	50.774	ENSMMUG00000000842	RPUSD1	98	53.398	Macaca_mulatta
ENSELUG00000014307	rpusd1	88	50.774	ENSMNEG00000042712	RPUSD1	98	53.398	Macaca_nemestrina
ENSELUG00000014307	rpusd1	88	50.774	ENSMLEG00000030591	RPUSD1	98	53.398	Mandrillus_leucophaeus
ENSELUG00000014307	rpusd1	89	72.964	ENSMAMG00000004735	rpusd1	99	72.313	Mastacembelus_armatus
ENSELUG00000014307	rpusd1	90	71.061	ENSMZEG00005003214	rpusd1	100	69.775	Maylandia_zebra
ENSELUG00000014307	rpusd1	86	61.616	ENSMGAG00000005447	RPUSD1	98	60.943	Meleagris_gallopavo
ENSELUG00000014307	rpusd1	73	53.543	ENSMAUG00000019998	Rpusd1	97	53.543	Mesocricetus_auratus
ENSELUG00000014307	rpusd1	88	53.443	ENSMICG00000017561	RPUSD1	79	71.845	Microcebus_murinus
ENSELUG00000014307	rpusd1	88	53.443	ENSMOCG00000014082	Rpusd1	83	59.843	Microtus_ochrogaster
ENSELUG00000014307	rpusd1	89	69.707	ENSMMOG00000012569	rpusd1	100	70.358	Mola_mola
ENSELUG00000014307	rpusd1	89	57.980	ENSMODG00000016882	RPUSD1	99	57.516	Monodelphis_domestica
ENSELUG00000014307	rpusd1	89	72.313	ENSMALG00000017818	rpusd1	99	72.313	Monopterus_albus
ENSELUG00000014307	rpusd1	88	53.722	MGP_CAROLIEiJ_G0021244	Rpusd1	83	60.630	Mus_caroli
ENSELUG00000014307	rpusd1	88	52.366	ENSMUSG00000041199	Rpusd1	83	60.236	Mus_musculus
ENSELUG00000014307	rpusd1	88	54.098	MGP_PahariEiJ_G0023562	Rpusd1	82	60.630	Mus_pahari
ENSELUG00000014307	rpusd1	88	52.366	MGP_SPRETEiJ_G0022155	Rpusd1	83	60.236	Mus_spretus
ENSELUG00000014307	rpusd1	88	52.459	ENSMPUG00000015897	RPUSD1	84	58.661	Mustela_putorius_furo
ENSELUG00000014307	rpusd1	88	54.426	ENSMLUG00000001089	RPUSD1	83	60.465	Myotis_lucifugus
ENSELUG00000014307	rpusd1	88	53.871	ENSNGAG00000003595	Rpusd1	83	61.024	Nannospalax_galili
ENSELUG00000014307	rpusd1	90	70.874	ENSNBRG00000006457	rpusd1	100	68.831	Neolamprologus_brichardi
ENSELUG00000014307	rpusd1	88	59.016	ENSMEUG00000016049	RPUSD1	98	58.224	Notamacropus_eugenii
ENSELUG00000014307	rpusd1	88	50.325	ENSOPRG00000008340	RPUSD1	85	55.906	Ochotona_princeps
ENSELUG00000014307	rpusd1	88	55.082	ENSODEG00000016945	RPUSD1	83	61.024	Octodon_degus
ENSELUG00000014307	rpusd1	89	72.727	ENSONIG00000015672	rpusd1	100	71.429	Oreochromis_niloticus
ENSELUG00000014307	rpusd1	89	69.180	ENSORLG00000013009	rpusd1	99	69.180	Oryzias_latipes
ENSELUG00000014307	rpusd1	89	69.180	ENSORLG00020010382	rpusd1	99	69.180	Oryzias_latipes_hni
ENSELUG00000014307	rpusd1	89	68.852	ENSORLG00015021354	rpusd1	99	68.852	Oryzias_latipes_hsok
ENSELUG00000014307	rpusd1	89	68.197	ENSOMEG00000021426	rpusd1	99	68.404	Oryzias_melastigma
ENSELUG00000014307	rpusd1	88	53.896	ENSOGAG00000003795	RPUSD1	81	59.843	Otolemur_garnettii
ENSELUG00000014307	rpusd1	88	57.377	ENSOARG00000014254	RPUSD1	82	62.992	Ovis_aries
ENSELUG00000014307	rpusd1	88	51.084	ENSPPAG00000034797	RPUSD1	79	72.816	Pan_paniscus
ENSELUG00000014307	rpusd1	88	54.426	ENSPPRG00000012389	RPUSD1	77	73.529	Panthera_pardus
ENSELUG00000014307	rpusd1	91	53.822	ENSPTIG00000008545	RPUSD1	77	73.529	Panthera_tigris_altaica
ENSELUG00000014307	rpusd1	88	51.084	ENSPTRG00000007565	RPUSD1	79	72.816	Pan_troglodytes
ENSELUG00000014307	rpusd1	88	51.084	ENSPANG00000024401	RPUSD1	79	72.816	Papio_anubis
ENSELUG00000014307	rpusd1	91	65.732	ENSPKIG00000018890	rpusd1	93	67.197	Paramormyrops_kingsleyae
ENSELUG00000014307	rpusd1	88	61.342	ENSPSIG00000013945	RPUSD1	99	61.842	Pelodiscus_sinensis
ENSELUG00000014307	rpusd1	89	67.647	ENSPMGG00000014950	rpusd1	99	66.340	Periophthalmus_magnuspinnatus
ENSELUG00000014307	rpusd1	88	53.312	ENSPEMG00000000497	Rpusd1	83	61.024	Peromyscus_maniculatus_bairdii
ENSELUG00000014307	rpusd1	89	55.375	ENSPMAG00000001563	rpusd1	84	61.719	Petromyzon_marinus
ENSELUG00000014307	rpusd1	90	60.968	ENSPCIG00000021216	-	94	60.645	Phascolarctos_cinereus
ENSELUG00000014307	rpusd1	90	69.805	ENSPFOG00000007946	rpusd1	100	68.471	Poecilia_formosa
ENSELUG00000014307	rpusd1	90	69.805	ENSPLAG00000011925	rpusd1	100	68.471	Poecilia_latipinna
ENSELUG00000014307	rpusd1	90	69.805	ENSPMEG00000002910	rpusd1	100	68.471	Poecilia_mexicana
ENSELUG00000014307	rpusd1	90	70.779	ENSPREG00000019851	rpusd1	100	69.745	Poecilia_reticulata
ENSELUG00000014307	rpusd1	88	40.984	ENSPCAG00000002258	RPUSD1	84	45.669	Procavia_capensis
ENSELUG00000014307	rpusd1	88	52.104	ENSPCOG00000022582	RPUSD1	79	71.845	Propithecus_coquereli
ENSELUG00000014307	rpusd1	88	50.485	ENSPVAG00000013104	RPUSD1	81	55.906	Pteropus_vampyrus
ENSELUG00000014307	rpusd1	90	71.383	ENSPNYG00000024076	rpusd1	100	70.096	Pundamilia_nyererei
ENSELUG00000014307	rpusd1	89	63.399	ENSPNAG00000013806	rpusd1	100	62.745	Pygocentrus_nattereri
ENSELUG00000014307	rpusd1	88	52.366	ENSRNOG00000023639	Rpusd1	83	59.843	Rattus_norvegicus
ENSELUG00000014307	rpusd1	88	51.084	ENSRBIG00000030238	RPUSD1	98	53.722	Rhinopithecus_bieti
ENSELUG00000014307	rpusd1	88	51.084	ENSRROG00000036663	RPUSD1	98	53.722	Rhinopithecus_roxellana
ENSELUG00000014307	rpusd1	88	54.426	ENSSBOG00000033063	RPUSD1	84	60.630	Saimiri_boliviensis_boliviensis
ENSELUG00000014307	rpusd1	88	60.065	ENSSHAG00000013500	RPUSD1	98	59.740	Sarcophilus_harrisii
ENSELUG00000014307	rpusd1	88	67.763	ENSSFOG00015014394	rpusd1	99	65.385	Scleropages_formosus
ENSELUG00000014307	rpusd1	90	71.290	ENSSMAG00000008045	rpusd1	93	71.290	Scophthalmus_maximus
ENSELUG00000014307	rpusd1	90	72.168	ENSSDUG00000001829	rpusd1	97	73.139	Seriola_dumerili
ENSELUG00000014307	rpusd1	90	72.168	ENSSLDG00000020853	rpusd1	97	73.139	Seriola_lalandi_dorsalis
ENSELUG00000014307	rpusd1	56	54.404	ENSSPUG00000005119	-	99	53.886	Sphenodon_punctatus
ENSELUG00000014307	rpusd1	89	74.183	ENSSPAG00000012708	rpusd1	99	72.549	Stegastes_partitus
ENSELUG00000014307	rpusd1	88	54.397	ENSSSCG00000008000	RPUSD1	98	61.176	Sus_scrofa
ENSELUG00000014307	rpusd1	73	68.254	ENSTGUG00000015375	RPUSD1	99	68.254	Taeniopygia_guttata
ENSELUG00000014307	rpusd1	90	71.521	ENSTRUG00000003041	rpusd1	99	70.550	Takifugu_rubripes
ENSELUG00000014307	rpusd1	88	66.667	ENSTNIG00000002660	rpusd1	99	66.007	Tetraodon_nigroviridis
ENSELUG00000014307	rpusd1	88	54.984	ENSTTRG00000010167	RPUSD1	81	61.417	Tursiops_truncatus
ENSELUG00000014307	rpusd1	88	53.055	ENSUAMG00000012736	RPUSD1	84	59.843	Ursus_americanus
ENSELUG00000014307	rpusd1	88	53.055	ENSUMAG00000021174	RPUSD1	92	59.843	Ursus_maritimus
ENSELUG00000014307	rpusd1	88	54.754	ENSVVUG00000012357	RPUSD1	84	60.236	Vulpes_vulpes
ENSELUG00000014307	rpusd1	88	60.197	ENSXETG00000007184	rpusd1	98	60.784	Xenopus_tropicalis
ENSELUG00000014307	rpusd1	90	70.130	ENSXCOG00000017930	rpusd1	100	68.471	Xiphophorus_couchianus
ENSELUG00000014307	rpusd1	90	70.455	ENSXMAG00000024084	rpusd1	99	69.453	Xiphophorus_maculatus