EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000014487 (Gene tree)
Gene ID: 105020674
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box-binding protein 2-A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 6204 bases
Position: chrLG24:14482431-14488634
Accession: 105020674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000035496	CSD	PF00313.22	5.4e-22	1	1
ENSELUP00000035513	CSD	PF00313.22	5.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000023258	YBX2-202	3328	XM_010887877	ENSELUP00000035513	343 (aa)	XP_010886179	UPI000576FFAB
ENSELUT00000023250	YBX2-201	1283	-	ENSELUP00000035496	335 (aa)	-	-

Gene Model

Click here to download ENSELUG00000014487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014487	YBX2	100	60.393	ENSAPOG00000012329	YBX2	100	61.667	Acanthochromis_polyacanthus
ENSELUG00000014487	YBX2	100	60.399	ENSAOCG00000003847	YBX2	95	67.492	Amphiprion_ocellaris
ENSELUG00000014487	YBX2	100	60.399	ENSAPEG00000014010	YBX2	100	61.972	Amphiprion_percula
ENSELUG00000014487	YBX2	100	59.003	ENSACLG00000004460	YBX2	100	61.667	Astatotilapia_calliptera
ENSELUG00000014487	YBX2	98	62.426	ENSAMXG00000007090	YBX2	99	62.202	Astyanax_mexicanus
ENSELUG00000014487	YBX2	100	58.621	ENSCSEG00000002588	YBX2	99	59.195	Cynoglossus_semilaevis
ENSELUG00000014487	YBX2	95	59.568	ENSCVAG00000004075	YBX2	93	63.975	Cyprinodon_variegatus
ENSELUG00000014487	YBX2	100	57.065	ENSFHEG00000001823	YBX2	99	58.172	Fundulus_heteroclitus
ENSELUG00000014487	YBX2	99	59.824	ENSGAFG00000005517	YBX2	97	61.290	Gambusia_affinis
ENSELUG00000014487	YBX2	92	59.443	ENSGACG00000019392	-	99	62.040	Gasterosteus_aculeatus
ENSELUG00000014487	YBX2	100	58.726	ENSHBUG00000002391	YBX2	100	61.667	Haplochromis_burtoni
ENSELUG00000014487	YBX2	97	63.284	ENSIPUG00000019571	YBX2	99	60.961	Ictalurus_punctatus
ENSELUG00000014487	YBX2	99	58.120	ENSMAMG00000003631	YBX2	98	56.145	Mastacembelus_armatus
ENSELUG00000014487	YBX2	100	59.003	ENSMZEG00005021709	YBX2	100	61.944	Maylandia_zebra
ENSELUG00000014487	YBX2	100	58.889	ENSNBRG00000021159	YBX2	100	61.667	Neolamprologus_brichardi
ENSELUG00000014487	YBX2	100	58.824	ENSONIG00000018954	YBX2	100	59.944	Oreochromis_niloticus
ENSELUG00000014487	YBX2	92	55.963	ENSOMEG00000010455	YBX2	99	56.980	Oryzias_melastigma
ENSELUG00000014487	YBX2	99	59.941	ENSPLAG00000009381	YBX2	97	62.611	Poecilia_latipinna
ENSELUG00000014487	YBX2	89	58.224	ENSPMEG00000002159	YBX2	98	61.290	Poecilia_mexicana
ENSELUG00000014487	YBX2	85	53.401	ENSPREG00000013357	YBX2	97	57.849	Poecilia_reticulata
ENSELUG00000014487	YBX2	100	59.003	ENSPNYG00000006649	YBX2	100	61.944	Pundamilia_nyererei
ENSELUG00000014487	YBX2	99	59.302	ENSPNAG00000017142	YBX2	94	58.501	Pygocentrus_nattereri
ENSELUG00000014487	YBX2	99	61.739	ENSSMAG00000009294	YBX2	100	60.870	Scophthalmus_maximus
ENSELUG00000014487	YBX2	99	62.974	ENSSDUG00000020339	YBX2	100	63.584	Seriola_dumerili
ENSELUG00000014487	YBX2	99	62.974	ENSSLDG00000010451	YBX2	100	63.584	Seriola_lalandi_dorsalis
ENSELUG00000014487	YBX2	100	58.046	ENSTRUG00000011813	YBX2	100	55.908	Takifugu_rubripes
ENSELUG00000014487	YBX2	89	64.918	ENSXMAG00000015755	YBX2	97	62.722	Xiphophorus_maculatus