EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000014564 (Gene tree)
Gene ID: 105016713
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4368 bases
Position: chrLG17:3865245-3869612
Accession: 105016713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000014523	LSM	PF01423.22	7.5e-19	1	1
ENSELUP00000035544	LSM	PF01423.22	8.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000023371	-	1781	XM_010880733	ENSELUP00000035544	237 (aa)	XP_010879035	UPI0005760BFB
ENSELUT00000023352	-	678	-	ENSELUP00000014523	225 (aa)	-	-

Gene Model

Click here to download ENSELUG00000014564's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014564	snrpb	71	93.210	ENSG00000125835	SNRPB	74	98.077	Homo_sapiens
ENSELUG00000014564	snrpb	99	97.890	ENSAPOG00000019606	snrpb	81	97.890	Acanthochromis_polyacanthus
ENSELUG00000014564	snrpb	71	93.210	ENSAMEG00000011353	SNRPB	59	95.833	Ailuropoda_melanoleuca
ENSELUG00000014564	snrpb	99	97.321	ENSACIG00000014480	snrpb	99	97.748	Amphilophus_citrinellus
ENSELUG00000014564	snrpb	99	97.468	ENSAOCG00000006876	snrpb	99	97.468	Amphiprion_ocellaris
ENSELUG00000014564	snrpb	99	97.468	ENSAPEG00000021585	snrpb	99	97.468	Amphiprion_percula
ENSELUG00000014564	snrpb	99	97.046	ENSATEG00000009836	snrpb	99	97.046	Anabas_testudineus
ENSELUG00000014564	snrpb	97	94.828	ENSACAG00000002053	SNRPB	100	94.828	Anolis_carolinensis
ENSELUG00000014564	snrpb	96	85.281	ENSANAG00000036271	-	58	88.276	Aotus_nancymaae
ENSELUG00000014564	snrpb	71	93.210	ENSANAG00000024443	-	63	95.862	Aotus_nancymaae
ENSELUG00000014564	snrpb	99	97.890	ENSACLG00000014707	snrpb	99	97.890	Astatotilapia_calliptera
ENSELUG00000014564	snrpb	100	97.899	ENSAMXG00000029434	snrpb	100	97.899	Astyanax_mexicanus
ENSELUG00000014564	snrpb	88	84.653	ENSBTAG00000001038	SNRPB	69	91.071	Bos_taurus
ENSELUG00000014564	snrpb	91	84.135	ENSCJAG00000023097	-	60	91.724	Callithrix_jacchus
ENSELUG00000014564	snrpb	71	93.210	ENSCJAG00000020971	-	63	95.862	Callithrix_jacchus
ENSELUG00000014564	snrpb	71	93.210	ENSCAFG00000006693	-	63	95.862	Canis_familiaris
ENSELUG00000014564	snrpb	61	84.672	ENSCAFG00000031109	-	61	82.877	Canis_familiaris
ENSELUG00000014564	snrpb	71	93.210	ENSCAFG00020016981	-	60	95.862	Canis_lupus_dingo
ENSELUG00000014564	snrpb	71	93.210	ENSCHIG00000025449	-	63	95.862	Capra_hircus
ENSELUG00000014564	snrpb	71	93.210	ENSTSYG00000014498	-	63	95.862	Carlito_syrichta
ENSELUG00000014564	snrpb	97	73.043	ENSTSYG00000032303	-	53	77.241	Carlito_syrichta
ENSELUG00000014564	snrpb	71	93.210	ENSCAPG00000012669	SNRPB	63	95.833	Cavia_aperea
ENSELUG00000014564	snrpb	71	93.210	ENSCPOG00000039408	SNRPB	63	95.862	Cavia_porcellus
ENSELUG00000014564	snrpb	71	93.210	ENSCCAG00000026002	SNRPB	63	95.862	Cebus_capucinus
ENSELUG00000014564	snrpb	54	83.465	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSELUG00000014564	snrpb	71	93.210	ENSCATG00000030230	SNRPB	63	95.862	Cercocebus_atys
ENSELUG00000014564	snrpb	71	93.210	ENSCLAG00000012442	SNRPB	61	95.862	Chinchilla_lanigera
ENSELUG00000014564	snrpb	71	93.210	ENSCSAG00000010840	SNRPB	63	95.862	Chlorocebus_sabaeus
ENSELUG00000014564	snrpb	100	96.250	ENSCPBG00000026801	SNRPB	100	96.250	Chrysemys_picta_bellii
ENSELUG00000014564	snrpb	71	93.210	ENSCANG00000019461	SNRPB	63	96.154	Colobus_angolensis_palliatus
ENSELUG00000014564	snrpb	71	93.210	ENSCGRG00001023046	Snrpb	63	95.862	Cricetulus_griseus_chok1gshd
ENSELUG00000014564	snrpb	71	93.210	ENSCGRG00000010423	Snrpb	61	95.620	Cricetulus_griseus_crigri
ENSELUG00000014564	snrpb	99	97.872	ENSCSEG00000020328	snrpb	99	97.872	Cynoglossus_semilaevis
ENSELUG00000014564	snrpb	99	97.458	ENSDARG00000011125	snrpb	99	97.458	Danio_rerio
ENSELUG00000014564	snrpb	71	93.210	ENSDNOG00000015545	-	60	95.862	Dasypus_novemcinctus
ENSELUG00000014564	snrpb	71	87.654	ENSDNOG00000007896	-	60	88.966	Dasypus_novemcinctus
ENSELUG00000014564	snrpb	71	93.210	ENSDORG00000029558	Snrpb	60	95.683	Dipodomys_ordii
ENSELUG00000014564	snrpb	67	67.550	FBgn0262601	SmB	71	69.444	Drosophila_melanogaster
ENSELUG00000014564	snrpb	79	79.096	ENSEBUG00000007467	SNRPB	61	88.276	Eptatretus_burgeri
ENSELUG00000014564	snrpb	71	92.593	ENSEASG00005012991	SNRPB	63	95.172	Equus_asinus_asinus
ENSELUG00000014564	snrpb	71	93.210	ENSECAG00000011944	SNRPB	63	95.862	Equus_caballus
ENSELUG00000014564	snrpb	71	93.210	ENSEEUG00000015568	SNRPB	51	95.862	Erinaceus_europaeus
ENSELUG00000014564	snrpb	71	93.210	ENSFCAG00000034090	-	63	95.862	Felis_catus
ENSELUG00000014564	snrpb	97	95.690	ENSFALG00000004866	SNRPB	100	95.690	Ficedula_albicollis
ENSELUG00000014564	snrpb	71	93.210	ENSFDAG00000009937	SNRPB	63	95.862	Fukomys_damarensis
ENSELUG00000014564	snrpb	100	95.833	ENSGALG00000035421	SNRPN	100	95.833	Gallus_gallus
ENSELUG00000014564	snrpb	97	95.928	ENSGAFG00000019558	snrpb	99	96.018	Gambusia_affinis
ENSELUG00000014564	snrpb	99	97.872	ENSGACG00000003262	snrpb	99	97.872	Gasterosteus_aculeatus
ENSELUG00000014564	snrpb	100	96.250	ENSGAGG00000001308	SNRPB	100	96.250	Gopherus_agassizii
ENSELUG00000014564	snrpb	71	93.210	ENSGGOG00000016138	SNRPB	63	95.862	Gorilla_gorilla
ENSELUG00000014564	snrpb	99	97.890	ENSHBUG00000008369	snrpb	99	97.890	Haplochromis_burtoni
ENSELUG00000014564	snrpb	64	86.111	ENSHGLG00000016505	-	70	85.517	Heterocephalus_glaber_female
ENSELUG00000014564	snrpb	71	93.210	ENSHGLG00000016241	-	63	95.862	Heterocephalus_glaber_female
ENSELUG00000014564	snrpb	71	93.210	ENSHGLG00100012877	-	63	95.862	Heterocephalus_glaber_male
ENSELUG00000014564	snrpb	64	86.111	ENSHGLG00100004178	-	70	85.517	Heterocephalus_glaber_male
ENSELUG00000014564	snrpb	99	98.298	ENSHCOG00000014888	snrpb	99	98.298	Hippocampus_comes
ENSELUG00000014564	snrpb	100	97.899	ENSIPUG00000024569	SNRPB	100	97.899	Ictalurus_punctatus
ENSELUG00000014564	snrpb	94	79.245	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSELUG00000014564	snrpb	71	91.358	ENSSTOG00000033664	-	60	94.406	Ictidomys_tridecemlineatus
ENSELUG00000014564	snrpb	71	93.210	ENSJJAG00000024170	Snrpb	63	95.862	Jaculus_jaculus
ENSELUG00000014564	snrpb	98	96.413	ENSKMAG00000014494	snrpb	93	96.491	Kryptolebias_marmoratus
ENSELUG00000014564	snrpb	99	98.723	ENSLBEG00000005678	snrpb	99	98.723	Labrus_bergylta
ENSELUG00000014564	snrpb	77	92.655	ENSLACG00000011459	SNRPB	60	97.931	Latimeria_chalumnae
ENSELUG00000014564	snrpb	100	98.319	ENSLOCG00000002687	snrpb	100	98.319	Lepisosteus_oculatus
ENSELUG00000014564	snrpb	71	88.889	ENSLAFG00000017588	SNRPB	61	90.972	Loxodonta_africana
ENSELUG00000014564	snrpb	71	93.210	ENSMFAG00000038756	SNRPB	63	95.862	Macaca_fascicularis
ENSELUG00000014564	snrpb	96	70.293	ENSMMUG00000010050	SNRPB	63	95.862	Macaca_mulatta
ENSELUG00000014564	snrpb	71	93.210	ENSMNEG00000027954	SNRPB	63	95.862	Macaca_nemestrina
ENSELUG00000014564	snrpb	71	93.210	ENSMLEG00000022346	SNRPB	63	95.862	Mandrillus_leucophaeus
ENSELUG00000014564	snrpb	99	97.881	ENSMAMG00000009294	snrpb	96	97.881	Mastacembelus_armatus
ENSELUG00000014564	snrpb	99	97.890	ENSMZEG00005011856	snrpb	99	97.890	Maylandia_zebra
ENSELUG00000014564	snrpb	71	93.210	ENSMICG00000016519	SNRPB	63	95.862	Microcebus_murinus
ENSELUG00000014564	snrpb	76	82.857	ENSMICG00000015983	-	67	85.517	Microcebus_murinus
ENSELUG00000014564	snrpb	71	92.593	ENSMOCG00000002892	-	63	95.172	Microtus_ochrogaster
ENSELUG00000014564	snrpb	59	78.417	ENSMOCG00000021362	-	60	76.224	Microtus_ochrogaster
ENSELUG00000014564	snrpb	98	98.643	ENSMMOG00000013226	snrpb	97	98.667	Mola_mola
ENSELUG00000014564	snrpb	99	97.046	ENSMALG00000020839	snrpb	80	97.046	Monopterus_albus
ENSELUG00000014564	snrpb	71	93.210	MGP_CAROLIEiJ_G0024293	Snrpb	74	98.077	Mus_caroli
ENSELUG00000014564	snrpb	71	93.210	ENSMUSG00000027404	Snrpb	74	98.077	Mus_musculus
ENSELUG00000014564	snrpb	71	93.210	MGP_PahariEiJ_G0025738	Snrpb	74	98.077	Mus_pahari
ENSELUG00000014564	snrpb	71	93.210	MGP_SPRETEiJ_G0025213	Snrpb	73	98.077	Mus_spretus
ENSELUG00000014564	snrpb	71	93.210	ENSMPUG00000009283	SNRPB	63	95.862	Mustela_putorius_furo
ENSELUG00000014564	snrpb	92	89.140	ENSMLUG00000016951	SNRPB	57	92.086	Myotis_lucifugus
ENSELUG00000014564	snrpb	71	93.210	ENSNGAG00000012051	Snrpb	63	95.862	Nannospalax_galili
ENSELUG00000014564	snrpb	100	95.595	ENSNBRG00000006353	snrpb	87	95.614	Neolamprologus_brichardi
ENSELUG00000014564	snrpb	71	93.210	ENSNLEG00000029067	SNRPB	61	95.833	Nomascus_leucogenys
ENSELUG00000014564	snrpb	71	93.210	ENSMEUG00000015625	SNRPB	64	95.833	Notamacropus_eugenii
ENSELUG00000014564	snrpb	71	87.654	ENSODEG00000016060	-	60	89.655	Octodon_degus
ENSELUG00000014564	snrpb	71	93.210	ENSODEG00000004305	-	63	95.862	Octodon_degus
ENSELUG00000014564	snrpb	99	97.890	ENSONIG00000000248	snrpb	99	97.890	Oreochromis_niloticus
ENSELUG00000014564	snrpb	92	87.081	ENSOCUG00000021456	-	60	91.724	Oryctolagus_cuniculus
ENSELUG00000014564	snrpb	92	63.942	ENSOCUG00000026813	-	61	65.734	Oryctolagus_cuniculus
ENSELUG00000014564	snrpb	91	88.889	ENSOCUG00000028215	-	60	93.103	Oryctolagus_cuniculus
ENSELUG00000014564	snrpb	72	89.697	ENSOCUG00000022423	-	86	87.500	Oryctolagus_cuniculus
ENSELUG00000014564	snrpb	71	93.210	ENSOCUG00000014042	-	60	95.862	Oryctolagus_cuniculus
ENSELUG00000014564	snrpb	99	97.046	ENSORLG00000021862	snrpb	99	97.046	Oryzias_latipes
ENSELUG00000014564	snrpb	71	93.210	ENSOGAG00000016149	SNRPB	60	95.862	Otolemur_garnettii
ENSELUG00000014564	snrpb	71	93.210	ENSOARG00000006740	SNRPB	63	95.862	Ovis_aries
ENSELUG00000014564	snrpb	71	93.210	ENSPPAG00000036314	SNRPB	63	95.862	Pan_paniscus
ENSELUG00000014564	snrpb	71	93.210	ENSPPRG00000003233	-	63	95.862	Panthera_pardus
ENSELUG00000014564	snrpb	71	93.210	ENSPTIG00000007468	SNRPB	62	95.833	Panthera_tigris_altaica
ENSELUG00000014564	snrpb	71	93.210	ENSPTRG00000013176	SNRPB	63	95.862	Pan_troglodytes
ENSELUG00000014564	snrpb	71	93.210	ENSPANG00000020362	SNRPB	60	95.862	Papio_anubis
ENSELUG00000014564	snrpb	100	97.059	ENSPKIG00000002865	snrpb	100	97.059	Paramormyrops_kingsleyae
ENSELUG00000014564	snrpb	99	96.234	ENSPSIG00000014125	SNRPB	98	96.234	Pelodiscus_sinensis
ENSELUG00000014564	snrpb	99	95.946	ENSPMGG00000016349	snrpb	95	95.946	Periophthalmus_magnuspinnatus
ENSELUG00000014564	snrpb	71	93.210	ENSPEMG00000007948	Snrpb	63	95.862	Peromyscus_maniculatus_bairdii
ENSELUG00000014564	snrpb	71	92.593	ENSPCIG00000004694	SNRPB	60	95.139	Phascolarctos_cinereus
ENSELUG00000014564	snrpb	64	100.000	ENSPFOG00000011802	snrpb	61	100.000	Poecilia_formosa
ENSELUG00000014564	snrpb	84	80.319	ENSPLAG00000014130	snrpb	59	100.000	Poecilia_latipinna
ENSELUG00000014564	snrpb	95	74.178	ENSPREG00000015515	snrpb	63	100.000	Poecilia_reticulata
ENSELUG00000014564	snrpb	71	93.210	ENSPPYG00000010841	SNRPB	63	95.862	Pongo_abelii
ENSELUG00000014564	snrpb	71	93.210	ENSPCOG00000013686	SNRPB	63	95.862	Propithecus_coquereli
ENSELUG00000014564	snrpb	71	91.975	ENSPVAG00000017013	SNRPB	51	94.483	Pteropus_vampyrus
ENSELUG00000014564	snrpb	99	97.890	ENSPNYG00000014788	snrpb	99	97.890	Pundamilia_nyererei
ENSELUG00000014564	snrpb	100	97.479	ENSPNAG00000016126	snrpb	100	97.479	Pygocentrus_nattereri
ENSELUG00000014564	snrpb	71	93.210	ENSRNOG00000006961	Snrpb	73	98.077	Rattus_norvegicus
ENSELUG00000014564	snrpb	71	93.210	ENSRBIG00000040505	SNRPB	63	95.862	Rhinopithecus_bieti
ENSELUG00000014564	snrpb	71	93.210	ENSRROG00000036094	SNRPB	63	95.862	Rhinopithecus_roxellana
ENSELUG00000014564	snrpb	71	93.210	ENSSBOG00000027310	SNRPB	63	95.862	Saimiri_boliviensis_boliviensis
ENSELUG00000014564	snrpb	100	95.417	ENSSHAG00000010394	SNRPB	100	95.417	Sarcophilus_harrisii
ENSELUG00000014564	snrpb	100	96.639	ENSSFOG00015002870	snrpb	100	96.639	Scleropages_formosus
ENSELUG00000014564	snrpb	99	98.298	ENSSMAG00000006766	snrpb	99	98.298	Scophthalmus_maximus
ENSELUG00000014564	snrpb	99	97.890	ENSSDUG00000018539	snrpb	99	97.890	Seriola_dumerili
ENSELUG00000014564	snrpb	99	97.890	ENSSLDG00000022391	snrpb	99	97.890	Seriola_lalandi_dorsalis
ENSELUG00000014564	snrpb	71	77.160	ENSSARG00000003084	SNRPB	62	77.778	Sorex_araneus
ENSELUG00000014564	snrpb	99	96.234	ENSSPUG00000015659	SNRPB	100	96.234	Sphenodon_punctatus
ENSELUG00000014564	snrpb	99	97.890	ENSSPAG00000021992	snrpb	99	97.890	Stegastes_partitus
ENSELUG00000014564	snrpb	98	73.991	ENSSSCG00000011966	-	77	66.667	Sus_scrofa
ENSELUG00000014564	snrpb	71	93.210	ENSSSCG00000040857	-	63	95.862	Sus_scrofa
ENSELUG00000014564	snrpb	72	83.636	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSELUG00000014564	snrpb	98	98.182	ENSTRUG00000023094	snrpb	99	98.230	Takifugu_rubripes
ENSELUG00000014564	snrpb	99	98.298	ENSTNIG00000002991	snrpb	99	98.298	Tetraodon_nigroviridis
ENSELUG00000014564	snrpb	71	93.210	ENSUAMG00000005984	-	80	91.071	Ursus_americanus
ENSELUG00000014564	snrpb	100	71.667	ENSVVUG00000010086	-	60	75.862	Vulpes_vulpes
ENSELUG00000014564	snrpb	71	92.593	ENSVVUG00000025654	-	60	95.172	Vulpes_vulpes
ENSELUG00000014564	snrpb	64	97.917	ENSXETG00000027266	snrpb	61	98.621	Xenopus_tropicalis
ENSELUG00000014564	snrpb	64	95.172	ENSXMAG00000028767	snrpb	58	100.000	Xiphophorus_maculatus