EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000014647 (Gene tree)
Gene ID: 105021207
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 14699 bases
Position: chrLG05:21020145-21034843
Accession: 105021207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000014626	Urb2	PF10441.9	2.2e-19	1	1
ENSELUP00000035605	Urb2	PF10441.9	2.4e-19	1	1
ENSELUP00000035611	Urb2	PF10441.9	5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000023478	-	4955	XM_010888705	ENSELUP00000035605	1527 (aa)	XP_010887007	UPI0005771EBD
ENSELUT00000038988	-	4848	-	ENSELUP00000035611	1546 (aa)	-	-
ENSELUT00000038999	-	5210	-	ENSELUP00000014626	1438 (aa)	-	-

Gene Model

Click here to download ENSELUG00000014647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014647	urb2	99	40.013	ENSG00000135763	URB2	100	67.816	Homo_sapiens
ENSELUG00000014647	urb2	96	48.427	ENSAPOG00000000608	urb2	100	48.427	Acanthochromis_polyacanthus
ENSELUG00000014647	urb2	100	39.948	ENSAMEG00000009206	URB2	100	40.013	Ailuropoda_melanoleuca
ENSELUG00000014647	urb2	100	50.209	ENSAOCG00000019961	urb2	100	50.209	Amphiprion_ocellaris
ENSELUG00000014647	urb2	100	50.090	ENSAPEG00000005263	urb2	100	50.090	Amphiprion_percula
ENSELUG00000014647	urb2	100	48.894	ENSATEG00000020930	urb2	100	48.894	Anabas_testudineus
ENSELUG00000014647	urb2	99	40.996	ENSAPLG00000002998	URB2	99	41.281	Anas_platyrhynchos
ENSELUG00000014647	urb2	99	42.438	ENSACAG00000001285	URB2	99	42.156	Anolis_carolinensis
ENSELUG00000014647	urb2	99	40.103	ENSANAG00000033963	URB2	99	40.039	Aotus_nancymaae
ENSELUG00000014647	urb2	96	47.715	ENSACLG00000009254	urb2	100	47.681	Astatotilapia_calliptera
ENSELUG00000014647	urb2	99	52.205	ENSAMXG00000003474	urb2	99	52.205	Astyanax_mexicanus
ENSELUG00000014647	urb2	100	39.178	ENSBTAG00000010180	URB2	100	38.985	Bos_taurus
ENSELUG00000014647	urb2	95	62.937	ENSCJAG00000010968	URB2	98	65.546	Callithrix_jacchus
ENSELUG00000014647	urb2	99	39.078	ENSCAFG00000012118	URB2	99	39.078	Canis_familiaris
ENSELUG00000014647	urb2	99	37.517	ENSCAFG00020027217	URB2	99	37.688	Canis_lupus_dingo
ENSELUG00000014647	urb2	100	38.867	ENSCHIG00000014513	URB2	100	38.674	Capra_hircus
ENSELUG00000014647	urb2	100	39.535	ENSTSYG00000006924	URB2	100	39.535	Carlito_syrichta
ENSELUG00000014647	urb2	60	50.303	ENSCPOG00000020777	-	99	50.000	Cavia_porcellus
ENSELUG00000014647	urb2	99	40.504	ENSCCAG00000023932	URB2	99	40.336	Cebus_capucinus
ENSELUG00000014647	urb2	99	40.090	ENSCATG00000043366	URB2	99	40.026	Cercocebus_atys
ENSELUG00000014647	urb2	99	40.143	ENSCLAG00000006268	URB2	99	40.078	Chinchilla_lanigera
ENSELUG00000014647	urb2	99	40.194	ENSCSAG00000010599	URB2	99	40.129	Chlorocebus_sabaeus
ENSELUG00000014647	urb2	63	53.153	ENSCHOG00000010163	URB2	64	53.153	Choloepus_hoffmanni
ENSELUG00000014647	urb2	99	43.608	ENSCPBG00000006191	URB2	99	43.608	Chrysemys_picta_bellii
ENSELUG00000014647	urb2	99	39.768	ENSCANG00000023711	URB2	99	39.833	Colobus_angolensis_palliatus
ENSELUG00000014647	urb2	99	38.706	ENSCGRG00001009591	Urb2	99	38.641	Cricetulus_griseus_chok1gshd
ENSELUG00000014647	urb2	99	38.706	ENSCGRG00000011259	Urb2	99	38.641	Cricetulus_griseus_crigri
ENSELUG00000014647	urb2	100	44.126	ENSCSEG00000000299	urb2	100	44.126	Cynoglossus_semilaevis
ENSELUG00000014647	urb2	100	47.818	ENSCVAG00000011011	urb2	100	47.847	Cyprinodon_variegatus
ENSELUG00000014647	urb2	100	56.957	ENSDARG00000003217	urb2	100	75.111	Danio_rerio
ENSELUG00000014647	urb2	99	35.010	ENSDNOG00000043064	URB2	99	35.539	Dasypus_novemcinctus
ENSELUG00000014647	urb2	99	39.237	ENSDORG00000014975	Urb2	99	39.108	Dipodomys_ordii
ENSELUG00000014647	urb2	95	40.278	ENSETEG00000002869	URB2	95	40.278	Echinops_telfairi
ENSELUG00000014647	urb2	100	40.822	ENSEASG00005012060	URB2	100	40.757	Equus_asinus_asinus
ENSELUG00000014647	urb2	92	63.448	ENSECAG00000012338	URB2	98	65.833	Equus_caballus
ENSELUG00000014647	urb2	92	60.140	ENSEEUG00000002669	URB2	92	60.140	Erinaceus_europaeus
ENSELUG00000014647	urb2	99	39.119	ENSFCAG00000007662	URB2	99	39.136	Felis_catus
ENSELUG00000014647	urb2	99	41.901	ENSFALG00000003385	URB2	99	41.901	Ficedula_albicollis
ENSELUG00000014647	urb2	99	39.509	ENSFDAG00000021079	URB2	99	39.445	Fukomys_damarensis
ENSELUG00000014647	urb2	100	47.048	ENSFHEG00000010357	urb2	100	47.105	Fundulus_heteroclitus
ENSELUG00000014647	urb2	99	49.266	ENSGMOG00000012459	urb2	100	49.585	Gadus_morhua
ENSELUG00000014647	urb2	99	42.273	ENSGALG00000011101	URB2	99	42.273	Gallus_gallus
ENSELUG00000014647	urb2	100	51.821	ENSGACG00000016179	urb2	100	51.757	Gasterosteus_aculeatus
ENSELUG00000014647	urb2	99	43.489	ENSGAGG00000021879	URB2	99	43.489	Gopherus_agassizii
ENSELUG00000014647	urb2	99	39.935	ENSGGOG00000025643	URB2	99	40.039	Gorilla_gorilla
ENSELUG00000014647	urb2	100	49.136	ENSHBUG00000018469	urb2	100	49.136	Haplochromis_burtoni
ENSELUG00000014647	urb2	99	38.599	ENSHGLG00000016561	URB2	99	39.003	Heterocephalus_glaber_female
ENSELUG00000014647	urb2	99	39.004	ENSHGLG00100001838	URB2	99	38.982	Heterocephalus_glaber_male
ENSELUG00000014647	urb2	100	55.123	ENSIPUG00000020315	urb2	100	55.123	Ictalurus_punctatus
ENSELUG00000014647	urb2	99	40.052	ENSSTOG00000025323	URB2	99	39.987	Ictidomys_tridecemlineatus
ENSELUG00000014647	urb2	99	39.523	ENSJJAG00000011998	Urb2	99	39.497	Jaculus_jaculus
ENSELUG00000014647	urb2	100	46.714	ENSKMAG00000020129	urb2	100	46.953	Kryptolebias_marmoratus
ENSELUG00000014647	urb2	99	43.774	ENSLACG00000002038	URB2	99	44.015	Latimeria_chalumnae
ENSELUG00000014647	urb2	99	54.102	ENSLOCG00000015462	urb2	99	54.232	Lepisosteus_oculatus
ENSELUG00000014647	urb2	99	38.720	ENSLAFG00000012484	URB2	100	38.695	Loxodonta_africana
ENSELUG00000014647	urb2	99	39.832	ENSMFAG00000039905	URB2	99	39.768	Macaca_fascicularis
ENSELUG00000014647	urb2	99	40.026	ENSMMUG00000009509	URB2	99	39.961	Macaca_mulatta
ENSELUG00000014647	urb2	99	39.961	ENSMNEG00000038762	URB2	99	39.897	Macaca_nemestrina
ENSELUG00000014647	urb2	99	40.155	ENSMLEG00000043252	URB2	99	40.090	Mandrillus_leucophaeus
ENSELUG00000014647	urb2	100	47.477	ENSMAMG00000020365	urb2	100	47.535	Mastacembelus_armatus
ENSELUG00000014647	urb2	100	49.136	ENSMZEG00005011027	urb2	100	49.106	Maylandia_zebra
ENSELUG00000014647	urb2	99	39.234	ENSMGAG00000012073	URB2	99	39.440	Meleagris_gallopavo
ENSELUG00000014647	urb2	95	60.140	ENSMAUG00000017980	Urb2	98	62.185	Mesocricetus_auratus
ENSELUG00000014647	urb2	100	40.090	ENSMICG00000033302	URB2	100	40.128	Microcebus_murinus
ENSELUG00000014647	urb2	99	38.710	ENSMOCG00000020369	Urb2	99	38.774	Microtus_ochrogaster
ENSELUG00000014647	urb2	100	48.826	ENSMALG00000006529	urb2	100	48.768	Monopterus_albus
ENSELUG00000014647	urb2	99	38.604	ENSMUSG00000031976	Urb2	99	38.828	Mus_musculus
ENSELUG00000014647	urb2	99	39.871	ENSMPUG00000012438	URB2	99	39.637	Mustela_putorius_furo
ENSELUG00000014647	urb2	99	39.755	ENSNGAG00000016524	Urb2	99	39.820	Nannospalax_galili
ENSELUG00000014647	urb2	99	39.690	ENSNLEG00000014450	URB2	99	39.652	Nomascus_leucogenys
ENSELUG00000014647	urb2	93	43.750	ENSMEUG00000016434	URB2	94	43.750	Notamacropus_eugenii
ENSELUG00000014647	urb2	91	40.491	ENSOPRG00000009906	URB2	92	40.368	Ochotona_princeps
ENSELUG00000014647	urb2	99	40.065	ENSODEG00000005593	URB2	99	40.194	Octodon_degus
ENSELUG00000014647	urb2	100	51.318	ENSONIG00000017078	urb2	100	51.383	Oreochromis_niloticus
ENSELUG00000014647	urb2	100	36.753	ENSOANG00000013732	URB2	100	36.941	Ornithorhynchus_anatinus
ENSELUG00000014647	urb2	100	40.322	ENSOCUG00000010700	URB2	100	40.103	Oryctolagus_cuniculus
ENSELUG00000014647	urb2	100	47.910	ENSORLG00000010915	urb2	100	47.789	Oryzias_latipes
ENSELUG00000014647	urb2	100	48.123	ENSORLG00020003361	urb2	100	48.002	Oryzias_latipes_hni
ENSELUG00000014647	urb2	100	47.365	ENSORLG00015001534	urb2	100	47.547	Oryzias_latipes_hsok
ENSELUG00000014647	urb2	100	46.865	ENSOMEG00000010076	urb2	100	46.805	Oryzias_melastigma
ENSELUG00000014647	urb2	100	39.640	ENSOGAG00000003021	URB2	100	39.704	Otolemur_garnettii
ENSELUG00000014647	urb2	100	38.670	ENSOARG00000003102	URB2	100	38.476	Ovis_aries
ENSELUG00000014647	urb2	99	40.168	ENSPPAG00000040629	URB2	99	40.271	Pan_paniscus
ENSELUG00000014647	urb2	99	39.263	ENSPPRG00000012767	URB2	99	39.083	Panthera_pardus
ENSELUG00000014647	urb2	92	60.976	ENSPTIG00000012577	URB2	98	60.976	Panthera_tigris_altaica
ENSELUG00000014647	urb2	99	40.168	ENSPTRG00000002092	URB2	99	40.271	Pan_troglodytes
ENSELUG00000014647	urb2	99	39.535	ENSPANG00000002245	URB2	99	39.470	Papio_anubis
ENSELUG00000014647	urb2	99	54.427	ENSPKIG00000005787	urb2	99	54.427	Paramormyrops_kingsleyae
ENSELUG00000014647	urb2	99	42.105	ENSPSIG00000002690	URB2	99	42.105	Pelodiscus_sinensis
ENSELUG00000014647	urb2	96	38.140	ENSPEMG00000019551	Urb2	100	38.031	Peromyscus_maniculatus_bairdii
ENSELUG00000014647	urb2	99	40.478	ENSPCIG00000030071	URB2	99	40.478	Phascolarctos_cinereus
ENSELUG00000014647	urb2	100	47.878	ENSPFOG00000014330	urb2	100	47.782	Poecilia_formosa
ENSELUG00000014647	urb2	100	46.363	ENSPLAG00000014654	urb2	100	46.292	Poecilia_latipinna
ENSELUG00000014647	urb2	100	47.004	ENSPMEG00000012356	urb2	100	46.910	Poecilia_mexicana
ENSELUG00000014647	urb2	100	46.453	ENSPREG00000010268	urb2	100	46.539	Poecilia_reticulata
ENSELUG00000014647	urb2	100	40.065	ENSPPYG00000000123	URB2	100	40.026	Pongo_abelii
ENSELUG00000014647	urb2	100	40.181	ENSPCOG00000023537	URB2	100	40.219	Propithecus_coquereli
ENSELUG00000014647	urb2	100	37.597	ENSPVAG00000002108	URB2	99	37.468	Pteropus_vampyrus
ENSELUG00000014647	urb2	96	47.846	ENSPNYG00000016840	urb2	100	47.812	Pundamilia_nyererei
ENSELUG00000014647	urb2	99	55.303	ENSPNAG00000013684	urb2	99	55.303	Pygocentrus_nattereri
ENSELUG00000014647	urb2	99	38.803	ENSRNOG00000026853	Urb2	97	38.739	Rattus_norvegicus
ENSELUG00000014647	urb2	99	39.974	ENSRBIG00000037937	URB2	99	39.897	Rhinopithecus_bieti
ENSELUG00000014647	urb2	99	39.935	ENSRROG00000039854	URB2	99	39.858	Rhinopithecus_roxellana
ENSELUG00000014647	urb2	99	39.987	ENSSBOG00000023055	URB2	99	39.819	Saimiri_boliviensis_boliviensis
ENSELUG00000014647	urb2	99	40.516	ENSSHAG00000014735	URB2	99	40.554	Sarcophilus_harrisii
ENSELUG00000014647	urb2	99	55.285	ENSSFOG00015015432	urb2	98	55.979	Scleropages_formosus
ENSELUG00000014647	urb2	96	47.748	ENSSMAG00000004984	urb2	100	47.552	Scophthalmus_maximus
ENSELUG00000014647	urb2	100	50.087	ENSSDUG00000000902	urb2	100	50.145	Seriola_dumerili
ENSELUG00000014647	urb2	99	41.995	ENSSPUG00000018549	URB2	99	41.995	Sphenodon_punctatus
ENSELUG00000014647	urb2	100	49.910	ENSSPAG00000013632	urb2	100	49.910	Stegastes_partitus
ENSELUG00000014647	urb2	100	39.741	ENSSSCG00000010186	URB2	100	39.651	Sus_scrofa
ENSELUG00000014647	urb2	99	41.222	ENSTGUG00000009990	URB2	99	40.900	Taeniopygia_guttata
ENSELUG00000014647	urb2	100	46.971	ENSTRUG00000008173	urb2	100	46.856	Takifugu_rubripes
ENSELUG00000014647	urb2	100	49.521	ENSTNIG00000017689	urb2	100	49.457	Tetraodon_nigroviridis
ENSELUG00000014647	urb2	100	37.630	ENSTTRG00000014864	URB2	100	37.500	Tursiops_truncatus
ENSELUG00000014647	urb2	100	39.806	ENSUAMG00000015022	URB2	100	39.871	Ursus_americanus
ENSELUG00000014647	urb2	100	39.741	ENSUMAG00000004728	URB2	100	39.806	Ursus_maritimus
ENSELUG00000014647	urb2	51	63.194	ENSVPAG00000001750	-	51	63.194	Vicugna_pacos
ENSELUG00000014647	urb2	99	39.181	ENSVVUG00000006747	URB2	99	39.187	Vulpes_vulpes
ENSELUG00000014647	urb2	99	37.436	ENSXETG00000023331	urb2	99	37.203	Xenopus_tropicalis
ENSELUG00000014647	urb2	100	46.732	ENSXMAG00000015059	urb2	100	46.732	Xiphophorus_maculatus