EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000014653 (Gene tree)
Gene ID: 105020946
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 11599 bases
Position: chrLG25:11577156-11588754
Accession: 105020946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000014601	ResIII	PF04851.15	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000023458	SMARCA5-201	2949	XM_013140660	ENSELUP00000014601	982 (aa)	XP_012996114	-

Gene Model

Click here to download ENSELUG00000014653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000014653	SMARCA5	99	82.922	ENSELUG00000010515	smarca1	95	84.086
ENSELUG00000014653	SMARCA5	55	38.640	ENSELUG00000016844	chd1l	52	38.640
ENSELUG00000014653	SMARCA5	52	36.745	ENSELUG00000014909	hells	69	37.081
ENSELUG00000014653	SMARCA5	50	34.307	ENSELUG00000019154	smarcad1b	55	34.307

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014653	SMARCA5	99	89.485	ENSG00000153147	SMARCA5	92	89.485	Homo_sapiens
ENSELUG00000014653	SMARCA5	99	89.278	ENSAMEG00000009585	SMARCA5	92	89.278	Ailuropoda_melanoleuca
ENSELUG00000014653	SMARCA5	96	88.947	ENSAPLG00000009206	SMARCA5	98	88.947	Anas_platyrhynchos
ENSELUG00000014653	SMARCA5	99	90.103	ENSACAG00000003038	SMARCA5	93	90.103	Anolis_carolinensis
ENSELUG00000014653	SMARCA5	99	89.485	ENSANAG00000019345	SMARCA5	97	89.485	Aotus_nancymaae
ENSELUG00000014653	SMARCA5	99	89.278	ENSBTAG00000003399	SMARCA5	92	89.278	Bos_taurus
ENSELUG00000014653	SMARCA5	99	89.485	ENSCJAG00000002735	SMARCA5	92	89.485	Callithrix_jacchus
ENSELUG00000014653	SMARCA5	99	89.278	ENSCAFG00000007525	SMARCA5	92	89.278	Canis_familiaris
ENSELUG00000014653	SMARCA5	96	89.662	ENSCAFG00020025641	SMARCA5	91	89.662	Canis_lupus_dingo
ENSELUG00000014653	SMARCA5	99	87.526	ENSCHIG00000016375	-	94	87.526	Capra_hircus
ENSELUG00000014653	SMARCA5	99	89.278	ENSCHIG00000013730	-	92	89.278	Capra_hircus
ENSELUG00000014653	SMARCA5	99	89.381	ENSTSYG00000009954	SMARCA5	97	89.381	Carlito_syrichta
ENSELUG00000014653	SMARCA5	99	88.695	ENSCAPG00000013747	SMARCA5	95	88.695	Cavia_aperea
ENSELUG00000014653	SMARCA5	99	89.072	ENSCPOG00000002259	SMARCA5	92	89.072	Cavia_porcellus
ENSELUG00000014653	SMARCA5	99	89.485	ENSCCAG00000027215	SMARCA5	97	89.485	Cebus_capucinus
ENSELUG00000014653	SMARCA5	99	89.485	ENSCATG00000044917	SMARCA5	92	89.485	Cercocebus_atys
ENSELUG00000014653	SMARCA5	99	89.175	ENSCLAG00000006153	SMARCA5	97	89.175	Chinchilla_lanigera
ENSELUG00000014653	SMARCA5	99	89.485	ENSCSAG00000003448	SMARCA5	99	89.485	Chlorocebus_sabaeus
ENSELUG00000014653	SMARCA5	90	88.649	ENSCHOG00000011724	SMARCA5	83	88.649	Choloepus_hoffmanni
ENSELUG00000014653	SMARCA5	99	89.381	ENSCPBG00000027535	SMARCA5	93	89.381	Chrysemys_picta_bellii
ENSELUG00000014653	SMARCA5	99	89.485	ENSCANG00000041629	SMARCA5	92	89.485	Colobus_angolensis_palliatus
ENSELUG00000014653	SMARCA5	99	89.278	ENSCGRG00001012719	Smarca5	92	89.278	Cricetulus_griseus_chok1gshd
ENSELUG00000014653	SMARCA5	99	89.278	ENSCGRG00000001417	Smarca5	96	89.278	Cricetulus_griseus_crigri
ENSELUG00000014653	SMARCA5	99	86.804	ENSDNOG00000009158	SMARCA5	92	86.804	Dasypus_novemcinctus
ENSELUG00000014653	SMARCA5	97	81.217	ENSDORG00000003466	Smarca5	97	81.132	Dipodomys_ordii
ENSELUG00000014653	SMARCA5	99	81.269	ENSEBUG00000014773	SMARCA5	96	81.269	Eptatretus_burgeri
ENSELUG00000014653	SMARCA5	99	89.278	ENSEASG00005001866	SMARCA5	98	89.952	Equus_asinus_asinus
ENSELUG00000014653	SMARCA5	99	89.278	ENSECAG00000002676	SMARCA5	92	89.278	Equus_caballus
ENSELUG00000014653	SMARCA5	99	85.876	ENSEEUG00000013176	SMARCA5	97	85.876	Erinaceus_europaeus
ENSELUG00000014653	SMARCA5	99	89.278	ENSFCAG00000004544	SMARCA5	92	89.278	Felis_catus
ENSELUG00000014653	SMARCA5	99	89.794	ENSFALG00000004987	SMARCA5	99	89.794	Ficedula_albicollis
ENSELUG00000014653	SMARCA5	99	89.072	ENSFDAG00000021016	SMARCA5	97	89.072	Fukomys_damarensis
ENSELUG00000014653	SMARCA5	99	94.845	ENSGMOG00000007519	SMARCA5	94	94.845	Gadus_morhua
ENSELUG00000014653	SMARCA5	99	90.000	ENSGALG00000009913	SMARCA5	93	90.000	Gallus_gallus
ENSELUG00000014653	SMARCA5	99	93.814	ENSGACG00000017238	SMARCA5	94	93.814	Gasterosteus_aculeatus
ENSELUG00000014653	SMARCA5	99	89.485	ENSGAGG00000019882	SMARCA5	93	89.485	Gopherus_agassizii
ENSELUG00000014653	SMARCA5	99	89.485	ENSGGOG00000012595	SMARCA5	97	89.485	Gorilla_gorilla
ENSELUG00000014653	SMARCA5	99	80.619	ENSHGLG00000000317	-	92	80.619	Heterocephalus_glaber_female
ENSELUG00000014653	SMARCA5	99	88.969	ENSHGLG00000000816	-	92	88.969	Heterocephalus_glaber_female
ENSELUG00000014653	SMARCA5	99	88.969	ENSHGLG00100018421	-	97	88.969	Heterocephalus_glaber_male
ENSELUG00000014653	SMARCA5	99	89.072	ENSSTOG00000010683	SMARCA5	92	89.072	Ictidomys_tridecemlineatus
ENSELUG00000014653	SMARCA5	99	89.485	ENSJJAG00000014965	Smarca5	92	89.485	Jaculus_jaculus
ENSELUG00000014653	SMARCA5	99	89.381	ENSLACG00000007091	SMARCA5	95	89.381	Latimeria_chalumnae
ENSELUG00000014653	SMARCA5	99	92.577	ENSLOCG00000008966	SMARCA5	94	92.577	Lepisosteus_oculatus
ENSELUG00000014653	SMARCA5	99	89.278	ENSLAFG00000007795	SMARCA5	92	89.278	Loxodonta_africana
ENSELUG00000014653	SMARCA5	99	89.485	ENSMFAG00000043649	SMARCA5	92	89.485	Macaca_fascicularis
ENSELUG00000014653	SMARCA5	99	89.485	ENSMMUG00000000829	SMARCA5	98	89.695	Macaca_mulatta
ENSELUG00000014653	SMARCA5	99	89.485	ENSMNEG00000031916	SMARCA5	92	89.485	Macaca_nemestrina
ENSELUG00000014653	SMARCA5	99	89.485	ENSMLEG00000042393	SMARCA5	92	89.485	Mandrillus_leucophaeus
ENSELUG00000014653	SMARCA5	99	90.000	ENSMGAG00000003517	SMARCA5	96	90.000	Meleagris_gallopavo
ENSELUG00000014653	SMARCA5	99	89.278	ENSMAUG00000015902	Smarca5	95	89.278	Mesocricetus_auratus
ENSELUG00000014653	SMARCA5	99	89.381	ENSMICG00000003971	SMARCA5	97	88.127	Microcebus_murinus
ENSELUG00000014653	SMARCA5	99	89.072	ENSMOCG00000016986	-	92	89.072	Microtus_ochrogaster
ENSELUG00000014653	SMARCA5	99	89.381	ENSMODG00000000391	SMARCA5	92	89.381	Monodelphis_domestica
ENSELUG00000014653	SMARCA5	99	89.175	ENSMUSG00000031715	Smarca5	92	89.175	Mus_musculus
ENSELUG00000014653	SMARCA5	99	89.278	MGP_PahariEiJ_G0022862	Smarca5	92	89.278	Mus_pahari
ENSELUG00000014653	SMARCA5	99	89.278	ENSMLUG00000000468	SMARCA5	92	89.278	Myotis_lucifugus
ENSELUG00000014653	SMARCA5	99	89.278	ENSNGAG00000000441	Smarca5	92	89.278	Nannospalax_galili
ENSELUG00000014653	SMARCA5	99	89.485	ENSNLEG00000005383	SMARCA5	92	89.485	Nomascus_leucogenys
ENSELUG00000014653	SMARCA5	99	82.784	ENSMEUG00000001267	SMARCA5	99	82.784	Notamacropus_eugenii
ENSELUG00000014653	SMARCA5	88	94.180	ENSOPRG00000014427	SMARCA5	83	94.180	Ochotona_princeps
ENSELUG00000014653	SMARCA5	99	89.381	ENSOANG00000013921	SMARCA5	99	89.381	Ornithorhynchus_anatinus
ENSELUG00000014653	SMARCA5	99	89.175	ENSOCUG00000013042	SMARCA5	99	89.175	Oryctolagus_cuniculus
ENSELUG00000014653	SMARCA5	99	89.381	ENSOGAG00000009702	SMARCA5	92	89.381	Otolemur_garnettii
ENSELUG00000014653	SMARCA5	98	89.027	ENSOARG00000010589	SMARCA5	91	89.027	Ovis_aries
ENSELUG00000014653	SMARCA5	99	89.588	ENSPPAG00000028523	SMARCA5	97	89.588	Pan_paniscus
ENSELUG00000014653	SMARCA5	99	84.433	ENSPPRG00000004925	SMARCA5	92	84.948	Panthera_pardus
ENSELUG00000014653	SMARCA5	99	89.278	ENSPTIG00000020959	SMARCA5	93	89.278	Panthera_tigris_altaica
ENSELUG00000014653	SMARCA5	99	89.485	ENSPTRG00000016472	SMARCA5	97	89.485	Pan_troglodytes
ENSELUG00000014653	SMARCA5	99	89.485	ENSPANG00000001175	SMARCA5	92	89.485	Papio_anubis
ENSELUG00000014653	SMARCA5	99	92.673	ENSPKIG00000015885	SMARCA5	99	92.673	Paramormyrops_kingsleyae
ENSELUG00000014653	SMARCA5	99	92.673	ENSPKIG00000015699	SMARCA5	98	91.736	Paramormyrops_kingsleyae
ENSELUG00000014653	SMARCA5	99	87.216	ENSPSIG00000004177	SMARCA5	97	87.216	Pelodiscus_sinensis
ENSELUG00000014653	SMARCA5	99	93.107	ENSPMGG00000012316	SMARCA5	99	93.107	Periophthalmus_magnuspinnatus
ENSELUG00000014653	SMARCA5	99	89.278	ENSPEMG00000008060	Smarca5	95	89.278	Peromyscus_maniculatus_bairdii
ENSELUG00000014653	SMARCA5	64	83.732	ENSPMAG00000008026	SMARCA5	97	83.732	Petromyzon_marinus
ENSELUG00000014653	SMARCA5	98	70.175	ENSPMAG00000006011	SMARCA5	79	84.983	Petromyzon_marinus
ENSELUG00000014653	SMARCA5	99	89.381	ENSPCIG00000003926	SMARCA5	92	89.381	Phascolarctos_cinereus
ENSELUG00000014653	SMARCA5	99	89.485	ENSPPYG00000015091	SMARCA5	92	89.485	Pongo_abelii
ENSELUG00000014653	SMARCA5	85	85.977	ENSPCAG00000014230	SMARCA5	83	85.977	Procavia_capensis
ENSELUG00000014653	SMARCA5	99	86.997	ENSPCOG00000026744	SMARCA5	97	86.715	Propithecus_coquereli
ENSELUG00000014653	SMARCA5	99	89.175	ENSPVAG00000006482	SMARCA5	92	89.175	Pteropus_vampyrus
ENSELUG00000014653	SMARCA5	99	93.705	ENSPNAG00000027824	SMARCA5	96	93.579	Pygocentrus_nattereri
ENSELUG00000014653	SMARCA5	99	89.175	ENSRNOG00000018149	Smarca5	97	89.175	Rattus_norvegicus
ENSELUG00000014653	SMARCA5	99	89.485	ENSRBIG00000044644	SMARCA5	92	89.485	Rhinopithecus_bieti
ENSELUG00000014653	SMARCA5	99	89.485	ENSRROG00000029591	SMARCA5	97	89.485	Rhinopithecus_roxellana
ENSELUG00000014653	SMARCA5	99	89.485	ENSSBOG00000036257	SMARCA5	92	89.485	Saimiri_boliviensis_boliviensis
ENSELUG00000014653	SMARCA5	99	89.381	ENSSHAG00000008464	SMARCA5	97	89.381	Sarcophilus_harrisii
ENSELUG00000014653	SMARCA5	99	92.157	ENSSFOG00015013252	SMARCA5	94	92.157	Scleropages_formosus
ENSELUG00000014653	SMARCA5	99	88.351	ENSSPUG00000007604	SMARCA5	97	88.351	Sphenodon_punctatus
ENSELUG00000014653	SMARCA5	99	89.278	ENSSSCG00000009047	SMARCA5	92	89.278	Sus_scrofa
ENSELUG00000014653	SMARCA5	99	89.691	ENSTGUG00000002408	SMARCA5	96	89.691	Taeniopygia_guttata
ENSELUG00000014653	SMARCA5	96	89.662	ENSUAMG00000023495	SMARCA5	91	89.662	Ursus_americanus
ENSELUG00000014653	SMARCA5	99	89.278	ENSUMAG00000015324	SMARCA5	94	89.278	Ursus_maritimus
ENSELUG00000014653	SMARCA5	99	89.072	ENSVPAG00000008982	SMARCA5	92	89.072	Vicugna_pacos
ENSELUG00000014653	SMARCA5	99	89.278	ENSVVUG00000017473	SMARCA5	92	89.278	Vulpes_vulpes
ENSELUG00000014653	SMARCA5	93	88.974	ENSXETG00000017566	smarca5	92	88.974	Xenopus_tropicalis