EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000014743 (Gene tree)
Gene ID
105019079
Gene Symbol
cnot3a
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
10383 bases
Position
chrLG20:25413280-25423662
Accession
105019079
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000035686Not3PF04065.151.7e-9511
ENSELUP00000014735Not3PF04065.151.8e-9511
ENSELUP00000035686NOT2_3_5PF04153.182.1e-3811
ENSELUP00000014735NOT2_3_5PF04153.182.2e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000023615-3680XM_013139381ENSELUP00000035686920 (aa)XP_012994835-
ENSELUT00000023631-3794XM_020041205ENSELUP00000014735958 (aa)XP_019896764UPI00097322B2
Gene Model
Click here to download ENSELUG00000014743's gene model file
Pathways
Pathway IDPathway NameSource
els03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014743's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000014743cnot3a10066.462ENSELUG00000000953cnot3b5464.990
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000014743cnot3a7080.000ENSG00000088038CNOT310092.784Homo_sapiens
ENSELUG00000014743cnot3a5588.182ENSAPOG00000015002cnot3b9579.184Acanthochromis_polyacanthus
ENSELUG00000014743cnot3a6186.525ENSAPOG00000015499CNOT39286.525Acanthochromis_polyacanthus
ENSELUG00000014743cnot3a7080.303ENSAMEG00000004528CNOT38581.212Ailuropoda_melanoleuca
ENSELUG00000014743cnot3a5991.964ENSACIG00000003652cnot3b9891.964Amphilophus_citrinellus
ENSELUG00000014743cnot3a10079.638ENSACIG00000006635cnot3a9995.299Amphilophus_citrinellus
ENSELUG00000014743cnot3a9760.022ENSAOCG00000018385-10078.469Amphiprion_ocellaris
ENSELUG00000014743cnot3a5172.840ENSAOCG00000023769cnot3a9979.459Amphiprion_ocellaris
ENSELUG00000014743cnot3a5083.442ENSAPEG00000006624cnot3a10081.740Amphiprion_percula
ENSELUG00000014743cnot3a9762.378ENSAPEG00000002640cnot3b9692.925Amphiprion_percula
ENSELUG00000014743cnot3a10082.460ENSATEG00000022737cnot3a10080.535Anabas_testudineus
ENSELUG00000014743cnot3a10067.010ENSATEG00000015777cnot3b10064.907Anabas_testudineus
ENSELUG00000014743cnot3a7280.781ENSACAG00000016085CNOT38981.818Anolis_carolinensis
ENSELUG00000014743cnot3a7080.000ENSANAG00000025756CNOT38580.909Aotus_nancymaae
ENSELUG00000014743cnot3a10065.871ENSACLG00000016702cnot3b10065.589Astatotilapia_calliptera
ENSELUG00000014743cnot3a10081.090ENSACLG00000021136cnot3a10080.256Astatotilapia_calliptera
ENSELUG00000014743cnot3a10069.479ENSAMXG00000012359cnot3a10069.005Astyanax_mexicanus
ENSELUG00000014743cnot3a10065.907ENSAMXG00000009447cnot3b9594.578Astyanax_mexicanus
ENSELUG00000014743cnot3a7179.167ENSBTAG00000014900CNOT39880.909Bos_taurus
ENSELUG00000014743cnot3a7080.000ENSCJAG00000001094CNOT38580.909Callithrix_jacchus
ENSELUG00000014743cnot3a7080.000ENSCAFG00000002699CNOT38580.909Canis_familiaris
ENSELUG00000014743cnot3a7080.000ENSCAFG00020018359CNOT38580.909Canis_lupus_dingo
ENSELUG00000014743cnot3a6577.313ENSCHIG00000015302CNOT37779.027Capra_hircus
ENSELUG00000014743cnot3a7080.000ENSTSYG00000008058CNOT38780.909Carlito_syrichta
ENSELUG00000014743cnot3a7671.649ENSCAPG00000009533CNOT38580.909Cavia_aperea
ENSELUG00000014743cnot3a7968.322ENSCPOG00000020741CNOT38580.909Cavia_porcellus
ENSELUG00000014743cnot3a7080.000ENSCCAG00000036290CNOT38580.909Cebus_capucinus
ENSELUG00000014743cnot3a7080.000ENSCATG00000030324CNOT38580.909Cercocebus_atys
ENSELUG00000014743cnot3a8479.167ENSCLAG00000003302CNOT310085.366Chinchilla_lanigera
ENSELUG00000014743cnot3a7080.000ENSCSAG00000001900CNOT38580.909Chlorocebus_sabaeus
ENSELUG00000014743cnot3a7280.480ENSCPBG00000011655CNOT38981.818Chrysemys_picta_bellii
ENSELUG00000014743cnot3a5469.957ENSCING00000000293-7169.957Ciona_intestinalis
ENSELUG00000014743cnot3a7178.869ENSCANG00000013408CNOT38580.909Colobus_angolensis_palliatus
ENSELUG00000014743cnot3a7671.907ENSCGRG00001000855Cnot38581.212Cricetulus_griseus_chok1gshd
ENSELUG00000014743cnot3a8579.724ENSCSEG00000016892cnot3b9277.778Cynoglossus_semilaevis
ENSELUG00000014743cnot3a10081.118ENSCSEG00000003574cnot3a10080.380Cynoglossus_semilaevis
ENSELUG00000014743cnot3a10062.187ENSCVAG00000022122cnot3b10062.644Cyprinodon_variegatus
ENSELUG00000014743cnot3a10077.968ENSCVAG00000008168cnot3a10077.219Cyprinodon_variegatus
ENSELUG00000014743cnot3a9281.459ENSDARG00000019842cnot3b10064.034Danio_rerio
ENSELUG00000014743cnot3a10072.157ENSDARG00000007135cnot3a10071.748Danio_rerio
ENSELUG00000014743cnot3a7079.697ENSDNOG00000045972CNOT38580.606Dasypus_novemcinctus
ENSELUG00000014743cnot3a7080.000ENSDORG00000008021Cnot310080.460Dipodomys_ordii
ENSELUG00000014743cnot3a54100.000ENSETEG00000006305CNOT363100.000Echinops_telfairi
ENSELUG00000014743cnot3a6965.758ENSEBUG00000010437cnot3a8264.242Eptatretus_burgeri
ENSELUG00000014743cnot3a7080.000ENSEASG00005021591CNOT38480.909Equus_asinus_asinus
ENSELUG00000014743cnot3a7080.000ENSECAG00000023181CNOT38480.909Equus_caballus
ENSELUG00000014743cnot3a7968.794ENSFCAG00000014042CNOT38580.909Felis_catus
ENSELUG00000014743cnot3a10060.861ENSFHEG00000001696cnot3b10062.747Fundulus_heteroclitus
ENSELUG00000014743cnot3a10076.989ENSFHEG00000023166cnot3a9795.763Fundulus_heteroclitus
ENSELUG00000014743cnot3a9475.936ENSGMOG00000005365cnot3a9875.485Gadus_morhua
ENSELUG00000014743cnot3a5580.435ENSGAFG00000013094cnot3a10078.526Gambusia_affinis
ENSELUG00000014743cnot3a10063.495ENSGAFG00000003459cnot3b10061.627Gambusia_affinis
ENSELUG00000014743cnot3a6684.211ENSGACG00000009395cnot3b7689.286Gasterosteus_aculeatus
ENSELUG00000014743cnot3a9474.087ENSGACG00000011489cnot3a9875.200Gasterosteus_aculeatus
ENSELUG00000014743cnot3a6678.571ENSGAGG00000012677CNOT310063.253Gopherus_agassizii
ENSELUG00000014743cnot3a7080.000ENSGGOG00000012996CNOT38580.909Gorilla_gorilla
ENSELUG00000014743cnot3a10081.197ENSHBUG00000005275cnot3a10080.363Haplochromis_burtoni
ENSELUG00000014743cnot3a9958.824ENSHBUG00000019699cnot3b9959.454Haplochromis_burtoni
ENSELUG00000014743cnot3a7179.167ENSHGLG00000008821CNOT310080.460Heterocephalus_glaber_female
ENSELUG00000014743cnot3a6081.154ENSHGLG00100006181CNOT310080.460Heterocephalus_glaber_male
ENSELUG00000014743cnot3a8893.607ENSHCOG00000020968cnot3a9793.151Hippocampus_comes
ENSELUG00000014743cnot3a10063.147ENSIPUG00000009046cnot3b10062.136Ictalurus_punctatus
ENSELUG00000014743cnot3a7691.489ENSIPUG00000000167cnot39392.766Ictalurus_punctatus
ENSELUG00000014743cnot3a7080.000ENSSTOG00000028248CNOT38580.909Ictidomys_tridecemlineatus
ENSELUG00000014743cnot3a7080.303ENSJJAG00000014594Cnot310080.460Jaculus_jaculus
ENSELUG00000014743cnot3a10078.959ENSKMAG00000004863cnot3a9994.578Kryptolebias_marmoratus
ENSELUG00000014743cnot3a10066.112ENSKMAG00000018723cnot3b10064.137Kryptolebias_marmoratus
ENSELUG00000014743cnot3a9765.875ENSLBEG00000018278cnot3b9963.773Labrus_bergylta
ENSELUG00000014743cnot3a5496.789ENSLBEG00000017296cnot3a9596.789Labrus_bergylta
ENSELUG00000014743cnot3a7278.698ENSLACG00000009742CNOT38980.303Latimeria_chalumnae
ENSELUG00000014743cnot3a5693.956ENSLOCG00000000005cnot3b8496.386Lepisosteus_oculatus
ENSELUG00000014743cnot3a7079.456ENSLAFG00000022133CNOT38580.363Loxodonta_africana
ENSELUG00000014743cnot3a7080.000ENSMFAG00000040073CNOT38580.909Macaca_fascicularis
ENSELUG00000014743cnot3a6189.496ENSMMUG00000009698CNOT310096.078Macaca_mulatta
ENSELUG00000014743cnot3a7080.000ENSMNEG00000036750CNOT38580.909Macaca_nemestrina
ENSELUG00000014743cnot3a7080.000ENSMLEG00000036579CNOT38480.909Mandrillus_leucophaeus
ENSELUG00000014743cnot3a10081.303ENSMAMG00000019397cnot3a10081.663Mastacembelus_armatus
ENSELUG00000014743cnot3a10064.433ENSMAMG00000019357cnot3b10062.193Mastacembelus_armatus
ENSELUG00000014743cnot3a10081.090ENSMZEG00005016304cnot3a10080.256Maylandia_zebra
ENSELUG00000014743cnot3a10066.181ENSMZEG00005002466cnot3b10066.213Maylandia_zebra
ENSELUG00000014743cnot3a7968.558ENSMAUG00000014996Cnot38581.212Mesocricetus_auratus
ENSELUG00000014743cnot3a7474.255ENSMICG00000002370CNOT38480.909Microcebus_murinus
ENSELUG00000014743cnot3a10079.314ENSMMOG00000016446cnot3a9886.290Mola_mola
ENSELUG00000014743cnot3a5989.787ENSMMOG00000013086cnot3b7989.787Mola_mola
ENSELUG00000014743cnot3a6180.606ENSMODG00000004066CNOT37381.515Monodelphis_domestica
ENSELUG00000014743cnot3a10080.645ENSMALG00000009204cnot3a10081.009Monopterus_albus
ENSELUG00000014743cnot3a5686.818ENSMALG00000004936cnot3b7384.545Monopterus_albus
ENSELUG00000014743cnot3a7080.303MGP_CAROLIEiJ_G0029095Cnot310098.000Mus_caroli
ENSELUG00000014743cnot3a7080.303ENSMUSG00000035632Cnot310098.000Mus_musculus
ENSELUG00000014743cnot3a7968.322MGP_PahariEiJ_G0020964Cnot310098.000Mus_pahari
ENSELUG00000014743cnot3a7080.303MGP_SPRETEiJ_G0030148Cnot310098.000Mus_spretus
ENSELUG00000014743cnot3a7179.167ENSMPUG00000010352CNOT38580.909Mustela_putorius_furo
ENSELUG00000014743cnot3a7080.000ENSNGAG00000013266Cnot38580.909Nannospalax_galili
ENSELUG00000014743cnot3a10079.380ENSNBRG00000002401cnot3a10078.549Neolamprologus_brichardi
ENSELUG00000014743cnot3a9070.419ENSNBRG00000003336cnot3b9589.381Neolamprologus_brichardi
ENSELUG00000014743cnot3a50100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSELUG00000014743cnot3a7671.392ENSODEG00000000705CNOT310088.608Octodon_degus
ENSELUG00000014743cnot3a10067.153ENSONIG00000007047cnot3b10066.876Oreochromis_niloticus
ENSELUG00000014743cnot3a10080.384ENSONIG00000006568cnot3a10079.553Oreochromis_niloticus
ENSELUG00000014743cnot3a7968.235ENSOCUG00000007691CNOT38580.909Oryctolagus_cuniculus
ENSELUG00000014743cnot3a7755.027ENSORLG00000005982cnot3b10063.272Oryzias_latipes
ENSELUG00000014743cnot3a10078.610ENSORLG00000011174cnot3a10078.891Oryzias_latipes
ENSELUG00000014743cnot3a5160.200ENSORLG00020005779cnot3b10062.925Oryzias_latipes_hni
ENSELUG00000014743cnot3a10078.762ENSORLG00020008009cnot3a10078.723Oryzias_latipes_hni
ENSELUG00000014743cnot3a10078.694ENSORLG00015013729cnot3a10078.762Oryzias_latipes_hsok
ENSELUG00000014743cnot3a5160.359ENSORLG00015019021cnot3b10063.251Oryzias_latipes_hsok
ENSELUG00000014743cnot3a10064.594ENSOMEG00000015557cnot3b10061.841Oryzias_melastigma
ENSELUG00000014743cnot3a10078.205ENSOMEG00000010309cnot3a9192.694Oryzias_melastigma
ENSELUG00000014743cnot3a8668.322ENSOGAG00000006945CNOT38580.909Otolemur_garnettii
ENSELUG00000014743cnot3a7080.000ENSPPAG00000002748CNOT38580.909Pan_paniscus
ENSELUG00000014743cnot3a7968.794ENSPPRG00000011705CNOT38580.909Panthera_pardus
ENSELUG00000014743cnot3a6380.186ENSPTIG00000008781CNOT39681.115Panthera_tigris_altaica
ENSELUG00000014743cnot3a7080.000ENSPTRG00000011444CNOT38580.909Pan_troglodytes
ENSELUG00000014743cnot3a7080.000ENSPTRG00000046717-8580.909Pan_troglodytes
ENSELUG00000014743cnot3a7080.000ENSPANG00000009375CNOT38580.909Papio_anubis
ENSELUG00000014743cnot3a6794.894ENSPKIG00000015967-9894.894Paramormyrops_kingsleyae
ENSELUG00000014743cnot3a10067.220ENSPKIG00000011733CNOT310067.526Paramormyrops_kingsleyae
ENSELUG00000014743cnot3a9858.950ENSPMGG00000022539cnot3b8669.318Periophthalmus_magnuspinnatus
ENSELUG00000014743cnot3a7968.558ENSPEMG00000024185Cnot38581.212Peromyscus_maniculatus_bairdii
ENSELUG00000014743cnot3a7180.303ENSPCIG00000023018CNOT39681.212Phascolarctos_cinereus
ENSELUG00000014743cnot3a8084.709ENSPFOG00000008693cnot3a9383.988Poecilia_formosa
ENSELUG00000014743cnot3a10063.299ENSPFOG00000007168cnot3b10062.120Poecilia_formosa
ENSELUG00000014743cnot3a10063.299ENSPLAG00000013457cnot3b10062.120Poecilia_latipinna
ENSELUG00000014743cnot3a5581.028ENSPLAG00000013324cnot3a10079.274Poecilia_latipinna
ENSELUG00000014743cnot3a5581.423ENSPMEG00000017718cnot3a10079.296Poecilia_mexicana
ENSELUG00000014743cnot3a10063.720ENSPMEG00000010184cnot3b10062.225Poecilia_mexicana
ENSELUG00000014743cnot3a5045.567ENSPREG00000000766-9643.888Poecilia_reticulata
ENSELUG00000014743cnot3a9192.694ENSPREG00000007592cnot3a9995.726Poecilia_reticulata
ENSELUG00000014743cnot3a9959.830ENSPREG00000000662cnot3b9757.773Poecilia_reticulata
ENSELUG00000014743cnot3a7079.697ENSPPYG00000010372CNOT38580.606Pongo_abelii
ENSELUG00000014743cnot3a5892.373ENSPCAG00000011999CNOT36392.373Procavia_capensis
ENSELUG00000014743cnot3a7474.255ENSPCOG00000017673CNOT310080.909Propithecus_coquereli
ENSELUG00000014743cnot3a7968.322ENSPVAG00000015564CNOT38580.303Pteropus_vampyrus
ENSELUG00000014743cnot3a10081.090ENSPNYG00000002282cnot3a10080.256Pundamilia_nyererei
ENSELUG00000014743cnot3a9960.147ENSPNYG00000003358cnot3b9960.778Pundamilia_nyererei
ENSELUG00000014743cnot3a8393.333ENSPNAG00000017679cnot3a10071.130Pygocentrus_nattereri
ENSELUG00000014743cnot3a10067.865ENSPNAG00000027459cnot3b10066.206Pygocentrus_nattereri
ENSELUG00000014743cnot3a7080.303ENSRNOG00000053234Cnot38581.212Rattus_norvegicus
ENSELUG00000014743cnot3a7968.085ENSRBIG00000031025CNOT38580.909Rhinopithecus_bieti
ENSELUG00000014743cnot3a7968.322ENSRROG00000003872CNOT38580.909Rhinopithecus_roxellana
ENSELUG00000014743cnot3a7080.000ENSSBOG00000030268CNOT39881.081Saimiri_boliviensis_boliviensis
ENSELUG00000014743cnot3a10066.075ENSSFOG00015019203-10065.121Scleropages_formosus
ENSELUG00000014743cnot3a10068.376ENSSFOG00015000248cnot310068.382Scleropages_formosus
ENSELUG00000014743cnot3a10065.031ENSSMAG00000016031cnot3b5156.797Scophthalmus_maximus
ENSELUG00000014743cnot3a5779.661ENSSMAG00000013235cnot3a10081.038Scophthalmus_maximus
ENSELUG00000014743cnot3a10081.450ENSSDUG00000008181cnot3a9995.726Seriola_dumerili
ENSELUG00000014743cnot3a10066.051ENSSDUG00000003428cnot3b10064.184Seriola_dumerili
ENSELUG00000014743cnot3a10066.051ENSSLDG00000014376cnot3b10064.184Seriola_lalandi_dorsalis
ENSELUG00000014743cnot3a9781.326ENSSLDG00000014733cnot3a9981.567Seriola_lalandi_dorsalis
ENSELUG00000014743cnot3a8069.378ENSSPUG00000008510CNOT38981.515Sphenodon_punctatus
ENSELUG00000014743cnot3a10067.459ENSSPAG00000001429cnot3b10065.503Stegastes_partitus
ENSELUG00000014743cnot3a9781.838ENSSPAG00000003858cnot3a9882.281Stegastes_partitus
ENSELUG00000014743cnot3a7080.000ENSSSCG00000003264CNOT38480.909Sus_scrofa
ENSELUG00000014743cnot3a10081.230ENSTRUG00000015732cnot3a10081.446Takifugu_rubripes
ENSELUG00000014743cnot3a9989.785ENSTRUG00000007248cnot3b8994.578Takifugu_rubripes
ENSELUG00000014743cnot3a9476.670ENSTNIG00000008082cnot3a10076.196Tetraodon_nigroviridis
ENSELUG00000014743cnot3a7080.303ENSUAMG00000005234CNOT38581.212Ursus_americanus
ENSELUG00000014743cnot3a5489.916ENSUMAG00000010934CNOT38991.176Ursus_maritimus
ENSELUG00000014743cnot3a6780.000ENSVVUG00000008239CNOT38480.909Vulpes_vulpes
ENSELUG00000014743cnot3a7779.758ENSXETG00000003166cnot38980.299Xenopus_tropicalis
ENSELUG00000014743cnot3a9760.583ENSXCOG00000018976cnot3b9960.419Xiphophorus_couchianus
ENSELUG00000014743cnot3a9092.237ENSXCOG00000019460cnot3a9794.915Xiphophorus_couchianus
ENSELUG00000014743cnot3a10077.897ENSXMAG00000012273cnot3a10078.908Xiphophorus_maculatus
ENSELUG00000014743cnot3a10063.562ENSXMAG00000014176cnot3b10061.885Xiphophorus_maculatus

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