EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000014785 (Gene tree)
Gene ID: 105021202
Gene Symbol: rab4a
Alias: fc93b03|wu:fc93b03
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3215 bases
Position: chrLG05:20990394-20993608
Accession: 105021202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000035719	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039057	-	891	XM_010888700	ENSELUP00000035719	213 (aa)	XP_010887002	UPI000460239B

Gene Model

Click here to download ENSELUG00000014785's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000014785	rab4a	81	37.288	ENSELUG00000000175	zgc:100918	86	37.288
ENSELUG00000014785	rab4a	99	42.925	ENSELUG00000012060	rab25b	96	42.925
ENSELUG00000014785	rab4a	80	34.659	ENSELUG00000019264	dnajc27	64	34.659
ENSELUG00000014785	rab4a	79	31.034	ENSELUG00000006480	rheb	93	31.034
ENSELUG00000014785	rab4a	79	40.828	ENSELUG00000007123	rab12	70	40.828
ENSELUG00000014785	rab4a	76	42.857	ENSELUG00000010439	-	73	42.857
ENSELUG00000014785	rab4a	74	41.139	ENSELUG00000008876	rab6a	76	41.139
ENSELUG00000014785	rab4a	89	42.408	ENSELUG00000003805	rab18a	92	42.408
ENSELUG00000014785	rab4a	98	46.411	ENSELUG00000021148	rab11bb	96	46.411
ENSELUG00000014785	rab4a	84	50.562	ENSELUG00000002999	rab11a	91	53.030
ENSELUG00000014785	rab4a	76	43.210	ENSELUG00000023972	rab35	80	43.210
ENSELUG00000014785	rab4a	98	59.330	ENSELUG00000009832	rab14	97	59.330
ENSELUG00000014785	rab4a	100	40.845	ENSELUG00000012166	RAB1A	95	40.845
ENSELUG00000014785	rab4a	72	34.416	ENSELUG00000020788	rab23	74	33.908
ENSELUG00000014785	rab4a	76	32.099	ENSELUG00000004712	HRAS	85	32.099
ENSELUG00000014785	rab4a	73	35.404	ENSELUG00000013219	rab33a	67	35.404
ENSELUG00000014785	rab4a	74	55.696	ENSELUG00000019240	-	81	55.696
ENSELUG00000014785	rab4a	81	31.638	ENSELUG00000003058	KRAS	93	31.638
ENSELUG00000014785	rab4a	80	36.571	ENSELUG00000021199	RAB9A	80	36.571
ENSELUG00000014785	rab4a	80	41.279	ENSELUG00000023120	-	81	41.279
ENSELUG00000014785	rab4a	79	53.846	ENSELUG00000020948	-	95	55.285
ENSELUG00000014785	rab4a	89	41.146	ENSELUG00000005304	rab39ba	90	41.146
ENSELUG00000014785	rab4a	76	40.373	ENSELUG00000015343	rab22a	83	40.373
ENSELUG00000014785	rab4a	82	38.286	ENSELUG00000022470	rab6bb	84	38.286
ENSELUG00000014785	rab4a	85	37.778	ENSELUG00000023247	si:dkey-16l2.16	86	37.778
ENSELUG00000014785	rab4a	76	44.099	ENSELUG00000018516	rab5c	77	42.857
ENSELUG00000014785	rab4a	89	44.737	ENSELUG00000023815	-	90	44.737
ENSELUG00000014785	rab4a	84	39.665	ENSELUG00000005989	RAB15	83	39.665
ENSELUG00000014785	rab4a	98	59.330	ENSELUG00000013571	-	97	59.330
ENSELUG00000014785	rab4a	78	33.143	ENSELUG00000005597	rab34b	68	33.143
ENSELUG00000014785	rab4a	91	41.753	ENSELUG00000011680	zgc:171927	99	40.284
ENSELUG00000014785	rab4a	68	39.241	ENSELUG00000011352	-	61	39.241
ENSELUG00000014785	rab4a	84	37.705	ENSELUG00000006539	RAB7A	88	37.705
ENSELUG00000014785	rab4a	87	57.527	ENSELUG00000023964	rab2a	99	53.589
ENSELUG00000014785	rab4a	97	36.486	ENSELUG00000013957	-	90	41.146
ENSELUG00000014785	rab4a	97	33.184	ENSELUG00000002575	rab33ba	89	33.184
ENSELUG00000014785	rab4a	84	37.158	ENSELUG00000016682	-	88	37.158
ENSELUG00000014785	rab4a	83	45.763	ENSELUG00000022997	rab30	88	45.763
ENSELUG00000014785	rab4a	83	47.159	ENSELUG00000006604	rab25a	83	47.159
ENSELUG00000014785	rab4a	58	30.159	ENSELUG00000016864	arl5c	69	30.159
ENSELUG00000014785	rab4a	74	40.506	ENSELUG00000001257	rab6ba	76	40.506
ENSELUG00000014785	rab4a	75	31.677	ENSELUG00000008604	rras2	85	31.792
ENSELUG00000014785	rab4a	89	36.458	ENSELUG00000010345	rab42a	89	36.458
ENSELUG00000014785	rab4a	54	30.508	ENSELUG00000010736	arl8a	52	30.508
ENSELUG00000014785	rab4a	77	37.427	ENSELUG00000004378	rab9b	83	37.427
ENSELUG00000014785	rab4a	87	44.865	ENSELUG00000012428	-	88	46.023
ENSELUG00000014785	rab4a	74	38.125	ENSELUG00000018921	rab36	61	38.125
ENSELUG00000014785	rab4a	75	34.545	ENSELUG00000013666	si:cabz01085950.1	81	34.545
ENSELUG00000014785	rab4a	74	35.000	ENSELUG00000022157	rab34a	61	35.000
ENSELUG00000014785	rab4a	77	36.310	ENSELUG00000016622	rab9a	83	36.310
ENSELUG00000014785	rab4a	100	38.605	ENSELUG00000020012	rab15	100	38.605
ENSELUG00000014785	rab4a	72	33.333	ENSELUG00000018367	rheb	83	33.333
ENSELUG00000014785	rab4a	76	42.857	ENSELUG00000006462	rab5aa	75	42.857
ENSELUG00000014785	rab4a	82	50.575	ENSELUG00000012035	rab11al	81	50.575
ENSELUG00000014785	rab4a	73	33.962	ENSELUG00000016028	rhebl1	85	33.962
ENSELUG00000014785	rab4a	73	30.723	ENSELUG00000013206	rasl11a	71	30.723
ENSELUG00000014785	rab4a	81	45.349	ENSELUG00000012801	rab13	86	45.349
ENSELUG00000014785	rab4a	89	44.737	ENSELUG00000015413	rab1ab	89	44.737
ENSELUG00000014785	rab4a	86	42.935	ENSELUG00000016450	rab18b	88	42.935
ENSELUG00000014785	rab4a	80	52.941	ENSELUG00000000916	-	91	53.543
ENSELUG00000014785	rab4a	76	42.857	ENSELUG00000013436	rab5ab	75	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014785	rab4a	100	94.366	ENSCVAG00000010727	rab4a	100	94.366	Cyprinodon_variegatus
ENSELUG00000014785	rab4a	100	95.305	ENSFHEG00000010509	rab4a	100	95.305	Fundulus_heteroclitus
ENSELUG00000014785	rab4a	100	94.366	ENSGAFG00000005477	rab4a	100	94.366	Gambusia_affinis
ENSELUG00000014785	rab4a	100	94.393	ENSGACG00000016164	rab4a	98	94.393	Gasterosteus_aculeatus
ENSELUG00000014785	rab4a	100	95.305	ENSKMAG00000020250	rab4a	100	95.305	Kryptolebias_marmoratus
ENSELUG00000014785	rab4a	100	95.305	ENSLBEG00000003101	rab4a	100	95.305	Labrus_bergylta
ENSELUG00000014785	rab4a	100	94.366	ENSMMOG00000015287	rab4a	100	94.366	Mola_mola
ENSELUG00000014785	rab4a	100	94.366	ENSPFOG00000014630	rab4a	100	94.366	Poecilia_formosa
ENSELUG00000014785	rab4a	100	94.366	ENSPLAG00000014563	rab4a	100	94.366	Poecilia_latipinna
ENSELUG00000014785	rab4a	100	94.366	ENSPMEG00000012205	rab4a	100	94.366	Poecilia_mexicana
ENSELUG00000014785	rab4a	100	94.366	ENSPREG00000010154	rab4a	100	94.366	Poecilia_reticulata
ENSELUG00000014785	rab4a	100	97.653	ENSSFOG00015015336	rab4a	100	97.653	Scleropages_formosus
ENSELUG00000014785	rab4a	100	94.366	ENSXMAG00000026193	rab4a	100	94.366	Xiphophorus_maculatus