EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000014929 (Gene tree)
Gene ID: 105027470
Gene Symbol: ppargc1b
Alias: fb55c08|perc1b|sb:cb520|si:bz1d10.4|wu:fb55c08
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 49652 bases
Position: chrLG04:13528934-13578585
Accession: 105027470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000035793	RRM_1	PF00076.22	2.2e-05	1	1
ENSELUP00000035811	RRM_1	PF00076.22	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039103	-	2460	-	ENSELUP00000035793	819 (aa)	-	-
ENSELUT00000039116	-	7114	XM_010899590	ENSELUP00000035811	876 (aa)	XP_010897892	UPI0005769240

Gene Model

Click here to download ENSELUG00000014929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000014929's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000014929	ppargc1b	74	44.094	ENSG00000155846	PPARGC1B	75	55.000	Homo_sapiens
ENSELUG00000014929	ppargc1b	73	41.732	ENSAMEG00000005287	PPARGC1B	69	41.732	Ailuropoda_melanoleuca
ENSELUG00000014929	ppargc1b	60	39.516	ENSAPLG00000009977	PPARGC1B	99	32.264	Anas_platyrhynchos
ENSELUG00000014929	ppargc1b	75	39.706	ENSACAG00000015737	PPARGC1B	67	39.706	Anolis_carolinensis
ENSELUG00000014929	ppargc1b	79	37.079	ENSANAG00000021830	PPARGC1B	67	37.079	Aotus_nancymaae
ENSELUG00000014929	ppargc1b	100	58.830	ENSAMXG00000010665	ppargc1b	100	59.424	Astyanax_mexicanus
ENSELUG00000014929	ppargc1b	73	45.968	ENSBTAG00000012943	PPARGC1B	80	33.557	Bos_taurus
ENSELUG00000014929	ppargc1b	79	37.079	ENSCJAG00000021113	PPARGC1B	65	37.079	Callithrix_jacchus
ENSELUG00000014929	ppargc1b	73	44.882	ENSCAFG00000018275	PPARGC1B	64	44.882	Canis_familiaris
ENSELUG00000014929	ppargc1b	73	45.968	ENSCHIG00000004409	PPARGC1B	50	45.968	Capra_hircus
ENSELUG00000014929	ppargc1b	74	40.645	ENSTSYG00000034354	PPARGC1B	51	48.980	Carlito_syrichta
ENSELUG00000014929	ppargc1b	72	42.958	ENSCAPG00000008859	PPARGC1B	57	50.000	Cavia_aperea
ENSELUG00000014929	ppargc1b	74	42.958	ENSCPOG00000001958	PPARGC1B	80	33.738	Cavia_porcellus
ENSELUG00000014929	ppargc1b	79	36.709	ENSCCAG00000026909	PPARGC1B	67	36.747	Cebus_capucinus
ENSELUG00000014929	ppargc1b	73	44.800	ENSCATG00000030402	PPARGC1B	75	55.000	Cercocebus_atys
ENSELUG00000014929	ppargc1b	74	42.254	ENSCLAG00000015452	PPARGC1B	50	44.156	Chinchilla_lanigera
ENSELUG00000014929	ppargc1b	70	44.800	ENSCSAG00000011792	PPARGC1B	79	34.218	Chlorocebus_sabaeus
ENSELUG00000014929	ppargc1b	89	45.082	ENSCPBG00000007891	PPARGC1B	95	53.030	Chrysemys_picta_bellii
ENSELUG00000014929	ppargc1b	73	44.000	ENSCANG00000037487	PPARGC1B	75	55.000	Colobus_angolensis_palliatus
ENSELUG00000014929	ppargc1b	74	36.709	ENSCGRG00001017949	Ppargc1b	77	33.165	Cricetulus_griseus_chok1gshd
ENSELUG00000014929	ppargc1b	74	35.443	ENSCGRG00000008387	Ppargc1b	78	33.584	Cricetulus_griseus_crigri
ENSELUG00000014929	ppargc1b	95	96.296	ENSDARG00000101569	ppargc1b	99	59.218	Danio_rerio
ENSELUG00000014929	ppargc1b	50	63.636	ENSDNOG00000005985	PPARGC1B	77	32.199	Dasypus_novemcinctus
ENSELUG00000014929	ppargc1b	80	37.234	ENSDORG00000012605	Ppargc1b	80	33.085	Dipodomys_ordii
ENSELUG00000014929	ppargc1b	73	45.312	ENSEASG00005002826	PPARGC1B	64	41.485	Equus_asinus_asinus
ENSELUG00000014929	ppargc1b	73	45.312	ENSECAG00000019769	PPARGC1B	66	35.222	Equus_caballus
ENSELUG00000014929	ppargc1b	85	40.123	ENSFALG00000008858	PPARGC1B	99	31.377	Ficedula_albicollis
ENSELUG00000014929	ppargc1b	50	44.853	ENSFALG00000009211	PPARGC1A	58	44.853	Ficedula_albicollis
ENSELUG00000014929	ppargc1b	71	42.520	ENSFDAG00000008719	PPARGC1B	63	42.520	Fukomys_damarensis
ENSELUG00000014929	ppargc1b	85	57.143	ENSGAGG00000012870	PPARGC1B	94	54.444	Gopherus_agassizii
ENSELUG00000014929	ppargc1b	71	44.882	ENSGGOG00000009505	PPARGC1B	74	52.041	Gorilla_gorilla
ENSELUG00000014929	ppargc1b	73	44.094	ENSHGLG00000005967	PPARGC1B	69	41.844	Heterocephalus_glaber_female
ENSELUG00000014929	ppargc1b	100	56.187	ENSIPUG00000001584	Ppargc1b	100	56.522	Ictalurus_punctatus
ENSELUG00000014929	ppargc1b	84	37.342	ENSSTOG00000024758	PPARGC1B	73	37.349	Ictidomys_tridecemlineatus
ENSELUG00000014929	ppargc1b	89	36.076	ENSJJAG00000018633	Ppargc1b	99	30.748	Jaculus_jaculus
ENSELUG00000014929	ppargc1b	70	45.082	ENSLACG00000011232	PPARGC1B	63	45.082	Latimeria_chalumnae
ENSELUG00000014929	ppargc1b	62	36.364	ENSLACG00000014054	PPARGC1A	50	42.604	Latimeria_chalumnae
ENSELUG00000014929	ppargc1b	100	55.666	ENSLOCG00000012195	ppargc1b	100	55.982	Lepisosteus_oculatus
ENSELUG00000014929	ppargc1b	85	41.322	ENSLAFG00000012339	PPARGC1B	84	37.349	Loxodonta_africana
ENSELUG00000014929	ppargc1b	73	44.800	ENSMFAG00000042269	PPARGC1B	75	55.000	Macaca_fascicularis
ENSELUG00000014929	ppargc1b	73	44.800	ENSMMUG00000004749	PPARGC1B	75	55.000	Macaca_mulatta
ENSELUG00000014929	ppargc1b	73	44.000	ENSMNEG00000034121	PPARGC1B	75	55.000	Macaca_nemestrina
ENSELUG00000014929	ppargc1b	70	44.800	ENSMLEG00000040973	PPARGC1B	79	34.218	Mandrillus_leucophaeus
ENSELUG00000014929	ppargc1b	57	56.667	ENSMGAG00000003134	PPARGC1B	61	56.667	Meleagris_gallopavo
ENSELUG00000014929	ppargc1b	71	40.179	ENSMAUG00000014191	Ppargc1b	79	35.980	Mesocricetus_auratus
ENSELUG00000014929	ppargc1b	73	44.444	ENSMICG00000002702	PPARGC1B	79	35.593	Microcebus_murinus
ENSELUG00000014929	ppargc1b	71	43.750	ENSMOCG00000014885	Ppargc1b	78	34.135	Microtus_ochrogaster
ENSELUG00000014929	ppargc1b	71	41.045	ENSMODG00000009891	PPARGC1B	84	38.922	Monodelphis_domestica
ENSELUG00000014929	ppargc1b	79	36.342	MGP_CAROLIEiJ_G0022323	Ppargc1b	81	35.523	Mus_caroli
ENSELUG00000014929	ppargc1b	79	36.779	ENSMUSG00000033871	Ppargc1b	81	35.750	Mus_musculus
ENSELUG00000014929	ppargc1b	78	36.609	MGP_PahariEiJ_G0019053	Ppargc1b	80	36.634	Mus_pahari
ENSELUG00000014929	ppargc1b	79	36.779	MGP_SPRETEiJ_G0023235	Ppargc1b	81	35.750	Mus_spretus
ENSELUG00000014929	ppargc1b	78	37.356	ENSMPUG00000014245	PPARGC1B	80	35.663	Mustela_putorius_furo
ENSELUG00000014929	ppargc1b	56	42.188	ENSMLUG00000013169	PPARGC1B	61	39.556	Myotis_lucifugus
ENSELUG00000014929	ppargc1b	73	41.322	ENSNGAG00000016998	Ppargc1b	80	34.300	Nannospalax_galili
ENSELUG00000014929	ppargc1b	74	44.094	ENSNLEG00000010193	PPARGC1B	66	50.000	Nomascus_leucogenys
ENSELUG00000014929	ppargc1b	66	42.063	ENSOPRG00000010017	PPARGC1B	63	42.063	Ochotona_princeps
ENSELUG00000014929	ppargc1b	61	38.843	ENSODEG00000004901	PPARGC1B	57	53.279	Octodon_degus
ENSELUG00000014929	ppargc1b	96	30.390	ENSOANG00000009368	PPARGC1B	99	30.581	Ornithorhynchus_anatinus
ENSELUG00000014929	ppargc1b	72	42.857	ENSOCUG00000013833	PPARGC1B	69	42.254	Oryctolagus_cuniculus
ENSELUG00000014929	ppargc1b	70	42.188	ENSOGAG00000015983	PPARGC1B	56	48.182	Otolemur_garnettii
ENSELUG00000014929	ppargc1b	77	37.278	ENSOARG00000005658	PPARGC1B	64	38.565	Ovis_aries
ENSELUG00000014929	ppargc1b	74	42.857	ENSPPAG00000035226	PPARGC1B	74	53.061	Pan_paniscus
ENSELUG00000014929	ppargc1b	73	43.307	ENSPPRG00000004608	PPARGC1B	64	41.732	Panthera_pardus
ENSELUG00000014929	ppargc1b	71	41.732	ENSPTIG00000007391	PPARGC1B	62	41.732	Panthera_tigris_altaica
ENSELUG00000014929	ppargc1b	74	44.094	ENSPTRG00000017403	PPARGC1B	57	55.000	Pan_troglodytes
ENSELUG00000014929	ppargc1b	73	44.800	ENSPANG00000009512	PPARGC1B	75	55.000	Papio_anubis
ENSELUG00000014929	ppargc1b	93	40.800	ENSPSIG00000008358	PPARGC1B	99	32.200	Pelodiscus_sinensis
ENSELUG00000014929	ppargc1b	71	43.750	ENSPEMG00000018822	Ppargc1b	83	33.493	Peromyscus_maniculatus_bairdii
ENSELUG00000014929	ppargc1b	76	38.994	ENSPCIG00000020102	PPARGC1B	64	38.922	Phascolarctos_cinereus
ENSELUG00000014929	ppargc1b	74	44.094	ENSPPYG00000015938	PPARGC1B	66	41.202	Pongo_abelii
ENSELUG00000014929	ppargc1b	53	43.307	ENSPCAG00000012171	PPARGC1B	64	31.839	Procavia_capensis
ENSELUG00000014929	ppargc1b	73	44.094	ENSPCOG00000024059	PPARGC1B	74	54.167	Propithecus_coquereli
ENSELUG00000014929	ppargc1b	100	60.647	ENSPNAG00000023871	ppargc1b	100	60.758	Pygocentrus_nattereri
ENSELUG00000014929	ppargc1b	71	40.541	ENSRNOG00000017503	Ppargc1b	65	40.870	Rattus_norvegicus
ENSELUG00000014929	ppargc1b	73	44.800	ENSRBIG00000036724	PPARGC1B	75	55.000	Rhinopithecus_bieti
ENSELUG00000014929	ppargc1b	69	44.800	ENSRROG00000029594	PPARGC1B	72	53.061	Rhinopithecus_roxellana
ENSELUG00000014929	ppargc1b	79	35.593	ENSSBOG00000028738	PPARGC1B	79	34.625	Saimiri_boliviensis_boliviensis
ENSELUG00000014929	ppargc1b	85	39.241	ENSSHAG00000016400	PPARGC1B	82	38.182	Sarcophilus_harrisii
ENSELUG00000014929	ppargc1b	88	60.000	ENSSFOG00015003048	ppargc1b	99	59.636	Scleropages_formosus
ENSELUG00000014929	ppargc1b	89	43.443	ENSSPUG00000019271	PPARGC1B	99	31.213	Sphenodon_punctatus
ENSELUG00000014929	ppargc1b	73	46.032	ENSSSCG00000014437	PPARGC1B	64	43.307	Sus_scrofa
ENSELUG00000014929	ppargc1b	84	44.628	ENSTGUG00000000232	PPARGC1B	99	30.722	Taeniopygia_guttata
ENSELUG00000014929	ppargc1b	81	43.902	ENSTTRG00000008430	PPARGC1B	86	33.898	Tursiops_truncatus
ENSELUG00000014929	ppargc1b	71	42.520	ENSUMAG00000005361	PPARGC1B	63	41.860	Ursus_maritimus
ENSELUG00000014929	ppargc1b	73	43.307	ENSVVUG00000014358	PPARGC1B	64	43.307	Vulpes_vulpes
ENSELUG00000014929	ppargc1b	96	31.640	ENSXETG00000012711	ppargc1b	99	30.567	Xenopus_tropicalis