EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000015003 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3374 bases
Position: chrLG11:31881414-31884787
Accession: 105027496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000035870	RRM_1	PF00076.22	2.2e-14	1	1
ENSELUP00000035852	RRM_1	PF00076.22	4.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000023944	RNPS1-201	768	-	ENSELUP00000035852	255 (aa)	-	-
ENSELUT00000023968	RNPS1-202	816	XM_010899616	ENSELUP00000035870	271 (aa)	XP_010897918	-

Gene Model

Click here to download ENSELUG00000015003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015003	RNPS1	75	71.429	ENSAPOG00000017310	RNPS1	68	74.286	Acanthochromis_polyacanthus
ENSELUG00000015003	RNPS1	82	69.604	ENSACIG00000014367	-	82	77.876	Amphilophus_citrinellus
ENSELUG00000015003	RNPS1	77	71.963	ENSACLG00000025942	RNPS1	75	73.684	Astatotilapia_calliptera
ENSELUG00000015003	RNPS1	77	73.585	ENSAMXG00000006330	-	81	73.469	Astyanax_mexicanus
ENSELUG00000015003	RNPS1	52	76.761	ENSCATG00000042361	-	52	69.091	Cercocebus_atys
ENSELUG00000015003	RNPS1	76	67.593	ENSCSAG00000005219	-	72	71.163	Chlorocebus_sabaeus
ENSELUG00000015003	RNPS1	75	51.691	ENSCPBG00000000214	RNPS1	72	53.623	Chrysemys_picta_bellii
ENSELUG00000015003	RNPS1	62	53.061	ENSCING00000016317	-	76	54.808	Ciona_intestinalis
ENSELUG00000015003	RNPS1	77	72.642	ENSCSEG00000000402	RNPS1	70	75.120	Cynoglossus_semilaevis
ENSELUG00000015003	RNPS1	75	66.512	ENSFALG00000004868	RNPS1	76	72.093	Ficedula_albicollis
ENSELUG00000015003	RNPS1	75	66.512	ENSGALG00000009288	RNPS1	76	72.093	Gallus_gallus
ENSELUG00000015003	RNPS1	77	69.048	ENSGACG00000005641	-	75	70.531	Gasterosteus_aculeatus
ENSELUG00000015003	RNPS1	75	64.651	ENSGAGG00000010452	RNPS1	70	70.233	Gopherus_agassizii
ENSELUG00000015003	RNPS1	77	71.495	ENSHBUG00000002494	RNPS1	75	73.206	Haplochromis_burtoni
ENSELUG00000015003	RNPS1	75	68.664	ENSHCOG00000004424	RNPS1	76	74.537	Hippocampus_comes
ENSELUG00000015003	RNPS1	76	65.566	ENSJJAG00000019234	-	61	61.836	Jaculus_jaculus
ENSELUG00000015003	RNPS1	80	64.758	ENSMFAG00000044121	-	74	61.905	Macaca_fascicularis
ENSELUG00000015003	RNPS1	86	65.574	ENSMMUG00000041726	-	75	69.302	Macaca_mulatta
ENSELUG00000015003	RNPS1	86	65.984	ENSMNEG00000024827	-	75	66.977	Macaca_nemestrina
ENSELUG00000015003	RNPS1	77	74.408	ENSMAMG00000021148	-	75	73.333	Mastacembelus_armatus
ENSELUG00000015003	RNPS1	52	69.853	ENSMAMG00000021609	-	76	77.358	Mastacembelus_armatus
ENSELUG00000015003	RNPS1	77	71.963	ENSMZEG00005012742	RNPS1	75	73.684	Maylandia_zebra
ENSELUG00000015003	RNPS1	76	66.514	ENSMGAG00000010042	RNPS1	89	72.093	Meleagris_gallopavo
ENSELUG00000015003	RNPS1	96	57.576	ENSMOCG00000000276	-	67	56.250	Microtus_ochrogaster
ENSELUG00000015003	RNPS1	82	73.894	ENSMMOG00000010863	RNPS1	82	80.000	Mola_mola
ENSELUG00000015003	RNPS1	77	63.981	ENSMALG00000013384	-	78	68.599	Monopterus_albus
ENSELUG00000015003	RNPS1	82	72.566	ENSNBRG00000023437	RNPS1	82	77.778	Neolamprologus_brichardi
ENSELUG00000015003	RNPS1	75	65.581	ENSOPRG00000016422	RNPS1	70	71.163	Ochotona_princeps
ENSELUG00000015003	RNPS1	59	52.174	ENSODEG00000002513	-	57	42.537	Octodon_degus
ENSELUG00000015003	RNPS1	77	68.396	ENSORLG00000008033	RNPS1	50	80.000	Oryzias_latipes
ENSELUG00000015003	RNPS1	50	62.992	ENSPTIG00000015643	RNPS1	50	84.211	Panthera_tigris_altaica
ENSELUG00000015003	RNPS1	75	65.581	ENSPSIG00000006048	RNPS1	70	71.163	Pelodiscus_sinensis
ENSELUG00000015003	RNPS1	77	71.963	ENSPNYG00000000585	RNPS1	75	73.684	Pundamilia_nyererei
ENSELUG00000015003	RNPS1	77	72.642	ENSPNAG00000025479	RNPS1	75	74.641	Pygocentrus_nattereri
ENSELUG00000015003	RNPS1	80	66.667	ENSRNOG00000027239	AABR07037800.1	70	68.095	Rattus_norvegicus
ENSELUG00000015003	RNPS1	82	68.996	ENSSFOG00015022746	RNPS1	83	75.983	Scleropages_formosus
ENSELUG00000015003	RNPS1	75	72.642	ENSSFOG00015019341	-	72	65.657	Scleropages_formosus
ENSELUG00000015003	RNPS1	77	74.178	ENSSMAG00000016933	RNPS1	75	71.292	Scophthalmus_maximus
ENSELUG00000015003	RNPS1	75	65.581	ENSSPUG00000016588	RNPS1	70	71.163	Sphenodon_punctatus
ENSELUG00000015003	RNPS1	75	65.581	ENSTGUG00000003237	RNPS1	76	66.047	Taeniopygia_guttata