EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000015077 (Gene tree)
Gene ID: 105019005
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 12328 bases
Position: chrLG20:25346474-25358801
Accession: 105019005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000015034	Fox-1_C	PF12414.8	4.4e-32	1	1
ENSELUP00000015053	Fox-1_C	PF12414.8	6.9e-30	1	1
ENSELUP00000015079	Fox-1_C	PF12414.8	7.1e-30	1	1
ENSELUP00000015034	RRM_1	PF00076.22	1.3e-17	1	1
ENSELUP00000015053	RRM_1	PF00076.22	1.4e-17	1	1
ENSELUP00000015079	RRM_1	PF00076.22	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039180	-	1462	XM_010884869	ENSELUP00000015053	381 (aa)	XP_010883171	-
ENSELUT00000024001	-	1101	-	ENSELUP00000015034	366 (aa)	-	-
ENSELUT00000024095	-	1749	XM_010884864	ENSELUP00000015079	390 (aa)	XP_010883166	UPI000576DA5E

Gene Model

Click here to download ENSELUG00000015077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000015077	rbfox1l	66	54.167	ENSELUG00000000102	rbfox2	100	53.750
ENSELUG00000015077	rbfox1l	54	43.777	ENSELUG00000013096	rbfox1	66	43.348
ENSELUG00000015077	rbfox1l	100	53.518	ENSELUG00000017963	rbfox3b	95	52.618
ENSELUG00000015077	rbfox1l	79	49.855	ENSELUG00000009404	-	63	53.360

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015077	rbfox1l	97	82.415	ENSAPOG00000016304	rbfox1l	98	79.528	Acanthochromis_polyacanthus
ENSELUG00000015077	rbfox1l	100	77.608	ENSACIG00000006441	rbfox1l	100	76.590	Amphilophus_citrinellus
ENSELUG00000015077	rbfox1l	86	79.878	ENSAOCG00000020938	rbfox1l	99	77.746	Amphiprion_ocellaris
ENSELUG00000015077	rbfox1l	100	82.952	ENSAPEG00000008232	rbfox1l	100	80.153	Amphiprion_percula
ENSELUG00000015077	rbfox1l	100	80.407	ENSATEG00000022649	rbfox1l	100	79.389	Anabas_testudineus
ENSELUG00000015077	rbfox1l	69	66.543	ENSACAG00000011931	-	89	68.605	Anolis_carolinensis
ENSELUG00000015077	rbfox1l	100	83.206	ENSACLG00000021394	rbfox1l	100	81.679	Astatotilapia_calliptera
ENSELUG00000015077	rbfox1l	100	82.785	ENSAMXG00000010470	rbfox1l	100	81.726	Astyanax_mexicanus
ENSELUG00000015077	rbfox1l	100	54.568	ENSCPBG00000010944	-	100	53.941	Chrysemys_picta_bellii
ENSELUG00000015077	rbfox1l	100	80.840	ENSCSEG00000018898	rbfox1l	100	81.365	Cynoglossus_semilaevis
ENSELUG00000015077	rbfox1l	100	82.443	ENSCVAG00000007986	rbfox1l	100	79.644	Cyprinodon_variegatus
ENSELUG00000015077	rbfox1l	100	80.203	ENSDARG00000021184	rbfox1l	100	80.457	Danio_rerio
ENSELUG00000015077	rbfox1l	95	79.231	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSELUG00000015077	rbfox1l	100	80.407	ENSGMOG00000005040	rbfox1l	100	78.626	Gadus_morhua
ENSELUG00000015077	rbfox1l	98	80.914	ENSGAFG00000013211	rbfox1l	99	79.032	Gambusia_affinis
ENSELUG00000015077	rbfox1l	100	83.461	ENSGACG00000010757	rbfox1l	100	81.934	Gasterosteus_aculeatus
ENSELUG00000015077	rbfox1l	69	65.779	ENSGAGG00000012440	-	84	68.110	Gopherus_agassizii
ENSELUG00000015077	rbfox1l	100	83.206	ENSHBUG00000013406	rbfox1l	100	81.679	Haplochromis_burtoni
ENSELUG00000015077	rbfox1l	100	80.711	ENSHCOG00000020771	rbfox1l	100	79.442	Hippocampus_comes
ENSELUG00000015077	rbfox1l	99	77.692	ENSIPUG00000000065	rbfox1l	99	75.616	Ictalurus_punctatus
ENSELUG00000015077	rbfox1l	100	82.487	ENSKMAG00000005146	rbfox1l	100	82.487	Kryptolebias_marmoratus
ENSELUG00000015077	rbfox1l	100	83.206	ENSLBEG00000017089	rbfox1l	100	83.206	Labrus_bergylta
ENSELUG00000015077	rbfox1l	100	83.461	ENSMAMG00000019480	rbfox1l	100	83.461	Mastacembelus_armatus
ENSELUG00000015077	rbfox1l	100	83.206	ENSMZEG00005016374	rbfox1l	100	81.679	Maylandia_zebra
ENSELUG00000015077	rbfox1l	100	82.697	ENSMMOG00000016530	rbfox1l	100	81.579	Mola_mola
ENSELUG00000015077	rbfox1l	100	78.626	ENSMALG00000009384	rbfox1l	100	78.684	Monopterus_albus
ENSELUG00000015077	rbfox1l	100	82.443	ENSNBRG00000003346	rbfox1l	100	81.102	Neolamprologus_brichardi
ENSELUG00000015077	rbfox1l	100	83.969	ENSONIG00000012754	rbfox1l	100	82.443	Oreochromis_niloticus
ENSELUG00000015077	rbfox1l	100	81.170	ENSORLG00000011269	rbfox1l	100	79.898	Oryzias_latipes
ENSELUG00000015077	rbfox1l	100	81.425	ENSORLG00020000162	rbfox1l	100	80.153	Oryzias_latipes_hni
ENSELUG00000015077	rbfox1l	100	81.170	ENSORLG00015013464	rbfox1l	100	79.898	Oryzias_latipes_hsok
ENSELUG00000015077	rbfox1l	100	82.443	ENSOMEG00000010584	rbfox1l	100	81.170	Oryzias_melastigma
ENSELUG00000015077	rbfox1l	100	84.224	ENSPKIG00000012029	rbfox1l	100	84.224	Paramormyrops_kingsleyae
ENSELUG00000015077	rbfox1l	100	78.049	ENSPMGG00000012082	rbfox1l	100	74.526	Periophthalmus_magnuspinnatus
ENSELUG00000015077	rbfox1l	100	82.697	ENSPFOG00000009338	rbfox1l	100	80.916	Poecilia_formosa
ENSELUG00000015077	rbfox1l	88	74.777	ENSPLAG00000012816	rbfox1l	99	67.953	Poecilia_latipinna
ENSELUG00000015077	rbfox1l	100	78.372	ENSPMEG00000017597	rbfox1l	100	78.117	Poecilia_mexicana
ENSELUG00000015077	rbfox1l	100	78.880	ENSPREG00000007940	rbfox1l	100	78.626	Poecilia_reticulata
ENSELUG00000015077	rbfox1l	100	82.952	ENSPNYG00000002098	rbfox1l	100	81.425	Pundamilia_nyererei
ENSELUG00000015077	rbfox1l	100	79.545	ENSPNAG00000001620	rbfox1l	100	80.000	Pygocentrus_nattereri
ENSELUG00000015077	rbfox1l	100	81.726	ENSSFOG00015000675	rbfox1l	100	81.980	Scleropages_formosus
ENSELUG00000015077	rbfox1l	100	83.969	ENSSMAG00000013090	rbfox1l	100	82.188	Scophthalmus_maximus
ENSELUG00000015077	rbfox1l	100	80.964	ENSSDUG00000008705	rbfox1l	100	80.964	Seriola_dumerili
ENSELUG00000015077	rbfox1l	100	81.425	ENSSLDG00000022256	rbfox1l	100	81.425	Seriola_lalandi_dorsalis
ENSELUG00000015077	rbfox1l	100	83.715	ENSSPAG00000016620	rbfox1l	100	80.916	Stegastes_partitus
ENSELUG00000015077	rbfox1l	96	78.421	ENSTRUG00000015905	rbfox1l	100	78.421	Takifugu_rubripes
ENSELUG00000015077	rbfox1l	68	78.545	ENSTNIG00000008088	rbfox1l	97	78.067	Tetraodon_nigroviridis
ENSELUG00000015077	rbfox1l	100	81.679	ENSXMAG00000023471	rbfox1l	100	81.679	Xiphophorus_maculatus