EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000015265 (Gene tree)
Gene ID: 105029079
Gene Symbol: prdm4
Alias: si:dkey-180p18.8
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8587 bases
Position: chrLG23:4395438-4404024
Accession: 105029079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036017	zf-C2H2	PF00096.26	2.2e-25	1	4
ENSELUP00000036017	zf-C2H2	PF00096.26	2.2e-25	2	4
ENSELUP00000036017	zf-C2H2	PF00096.26	2.2e-25	3	4
ENSELUP00000036017	zf-C2H2	PF00096.26	2.2e-25	4	4
ENSELUP00000036034	zf-C2H2	PF00096.26	2.8e-25	1	4
ENSELUP00000036034	zf-C2H2	PF00096.26	2.8e-25	2	4
ENSELUP00000036034	zf-C2H2	PF00096.26	2.8e-25	3	4
ENSELUP00000036034	zf-C2H2	PF00096.26	2.8e-25	4	4
ENSELUP00000036017	zf-met	PF12874.7	2.4e-05	1	1
ENSELUP00000036034	zf-met	PF12874.7	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039262	-	4720	XM_010902229	ENSELUP00000036034	808 (aa)	XP_010900531	UPI000577BC28
ENSELUT00000024256	-	2370	-	ENSELUP00000036017	789 (aa)	-	-

Gene Model

Click here to download ENSELUG00000015265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000015265	prdm4	55	37.349	ENSELUG00000023702	PRDM15	61	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015265	prdm4	99	60.753	ENSG00000110851	PRDM4	95	70.423	Homo_sapiens
ENSELUG00000015265	prdm4	99	60.194	ENSAMEG00000016174	PRDM4	99	60.558	Ailuropoda_melanoleuca
ENSELUG00000015265	prdm4	99	60.875	ENSAPLG00000009846	PRDM4	99	60.389	Anas_platyrhynchos
ENSELUG00000015265	prdm4	93	62.468	ENSANAG00000024800	PRDM4	99	60.146	Aotus_nancymaae
ENSELUG00000015265	prdm4	99	60.146	ENSBTAG00000012999	PRDM4	99	60.632	Bos_taurus
ENSELUG00000015265	prdm4	94	78.070	ENSCJAG00000015261	PRDM4	99	62.275	Callithrix_jacchus
ENSELUG00000015265	prdm4	93	62.078	ENSCAFG00000001788	PRDM4	99	60.510	Canis_familiaris
ENSELUG00000015265	prdm4	93	62.078	ENSCAFG00020004916	PRDM4	99	60.510	Canis_lupus_dingo
ENSELUG00000015265	prdm4	93	61.948	ENSCHIG00000019409	PRDM4	99	60.632	Capra_hircus
ENSELUG00000015265	prdm4	93	62.727	ENSTSYG00000009248	PRDM4	99	60.510	Carlito_syrichta
ENSELUG00000015265	prdm4	99	59.174	ENSCAPG00000013937	PRDM4	99	59.611	Cavia_aperea
ENSELUG00000015265	prdm4	99	59.129	ENSCPOG00000022385	PRDM4	99	59.564	Cavia_porcellus
ENSELUG00000015265	prdm4	93	62.727	ENSCCAG00000036033	PRDM4	99	60.389	Cebus_capucinus
ENSELUG00000015265	prdm4	99	60.753	ENSCATG00000044797	PRDM4	99	60.510	Cercocebus_atys
ENSELUG00000015265	prdm4	99	58.525	ENSCLAG00000007545	PRDM4	99	58.525	Chinchilla_lanigera
ENSELUG00000015265	prdm4	99	60.753	ENSCSAG00000002896	PRDM4	99	60.510	Chlorocebus_sabaeus
ENSELUG00000015265	prdm4	63	76.636	ENSCHOG00000001744	PRDM4	67	76.636	Choloepus_hoffmanni
ENSELUG00000015265	prdm4	94	61.647	ENSCPBG00000023187	PRDM4	99	59.903	Chrysemys_picta_bellii
ENSELUG00000015265	prdm4	99	60.753	ENSCANG00000021804	PRDM4	99	60.510	Colobus_angolensis_palliatus
ENSELUG00000015265	prdm4	99	59.880	ENSCGRG00001015102	-	99	59.759	Cricetulus_griseus_chok1gshd
ENSELUG00000015265	prdm4	97	59.675	ENSCGRG00000004044	-	99	59.551	Cricetulus_griseus_crigri
ENSELUG00000015265	prdm4	99	60.267	ENSDNOG00000032478	PRDM4	99	60.028	Dasypus_novemcinctus
ENSELUG00000015265	prdm4	94	51.960	ENSDORG00000015081	-	99	51.030	Dipodomys_ordii
ENSELUG00000015265	prdm4	95	44.183	ENSEBUG00000003775	prdm4	99	44.154	Eptatretus_burgeri
ENSELUG00000015265	prdm4	99	60.632	ENSECAG00000015423	PRDM4	99	60.875	Equus_caballus
ENSELUG00000015265	prdm4	95	58.430	ENSEEUG00000006569	PRDM4	99	58.430	Erinaceus_europaeus
ENSELUG00000015265	prdm4	99	60.146	ENSFCAG00000022478	PRDM4	99	60.510	Felis_catus
ENSELUG00000015265	prdm4	99	60.171	ENSFALG00000013342	PRDM4	99	59.562	Ficedula_albicollis
ENSELUG00000015265	prdm4	99	60.222	ENSGALG00000012619	PRDM4	99	59.223	Gallus_gallus
ENSELUG00000015265	prdm4	94	61.647	ENSGAGG00000002763	PRDM4	95	59.903	Gopherus_agassizii
ENSELUG00000015265	prdm4	99	60.753	ENSGGOG00000001244	PRDM4	99	60.510	Gorilla_gorilla
ENSELUG00000015265	prdm4	99	59.781	ENSHGLG00000004590	PRDM4	98	59.417	Heterocephalus_glaber_female
ENSELUG00000015265	prdm4	99	59.446	ENSHGLG00100007464	PRDM4	99	59.085	Heterocephalus_glaber_male
ENSELUG00000015265	prdm4	99	73.842	ENSIPUG00000024162	prdm4	100	73.045	Ictalurus_punctatus
ENSELUG00000015265	prdm4	93	62.338	ENSSTOG00000016168	PRDM4	95	61.697	Ictidomys_tridecemlineatus
ENSELUG00000015265	prdm4	79	62.007	ENSJJAG00000022448	-	92	61.871	Jaculus_jaculus
ENSELUG00000015265	prdm4	94	64.629	ENSLACG00000007452	PRDM4	94	64.369	Latimeria_chalumnae
ENSELUG00000015265	prdm4	78	77.647	ENSLOCG00000017092	prdm4	100	47.059	Lepisosteus_oculatus
ENSELUG00000015265	prdm4	93	61.390	ENSLAFG00000001483	PRDM4	97	61.146	Loxodonta_africana
ENSELUG00000015265	prdm4	99	60.753	ENSMFAG00000041862	PRDM4	99	60.510	Macaca_fascicularis
ENSELUG00000015265	prdm4	99	60.753	ENSMMUG00000015550	PRDM4	99	60.510	Macaca_mulatta
ENSELUG00000015265	prdm4	99	60.875	ENSMNEG00000032319	PRDM4	99	60.632	Macaca_nemestrina
ENSELUG00000015265	prdm4	99	60.632	ENSMLEG00000039607	PRDM4	99	60.389	Mandrillus_leucophaeus
ENSELUG00000015265	prdm4	99	56.638	ENSMGAG00000012815	PRDM4	99	56.395	Meleagris_gallopavo
ENSELUG00000015265	prdm4	93	62.597	ENSMICG00000007807	PRDM4	99	60.334	Microcebus_murinus
ENSELUG00000015265	prdm4	99	60.267	ENSMOCG00000000753	Prdm4	99	60.389	Microtus_ochrogaster
ENSELUG00000015265	prdm4	99	59.903	ENSMUSG00000035529	Prdm4	99	59.903	Mus_musculus
ENSELUG00000015265	prdm4	99	60.267	MGP_PahariEiJ_G0031398	Prdm4	99	60.024	Mus_pahari
ENSELUG00000015265	prdm4	99	60.146	MGP_SPRETEiJ_G0016505	Prdm4	99	60.267	Mus_spretus
ENSELUG00000015265	prdm4	93	57.180	ENSMPUG00000012238	PRDM4	95	57.106	Mustela_putorius_furo
ENSELUG00000015265	prdm4	93	62.987	ENSMLUG00000000767	PRDM4	99	60.875	Myotis_lucifugus
ENSELUG00000015265	prdm4	99	59.805	ENSNGAG00000018627	Prdm4	99	60.292	Nannospalax_galili
ENSELUG00000015265	prdm4	99	60.632	ENSNLEG00000006748	PRDM4	99	60.389	Nomascus_leucogenys
ENSELUG00000015265	prdm4	84	65.553	ENSMEUG00000004495	PRDM4	81	65.553	Notamacropus_eugenii
ENSELUG00000015265	prdm4	82	68.792	ENSOPRG00000010192	PRDM4	89	63.533	Ochotona_princeps
ENSELUG00000015265	prdm4	99	58.049	ENSODEG00000014750	PRDM4	99	57.927	Octodon_degus
ENSELUG00000015265	prdm4	94	62.500	ENSOANG00000005526	PRDM4	99	60.875	Ornithorhynchus_anatinus
ENSELUG00000015265	prdm4	94	59.693	ENSOCUG00000012859	PRDM4	96	60.391	Oryctolagus_cuniculus
ENSELUG00000015265	prdm4	93	62.597	ENSOGAG00000011945	PRDM4	99	60.267	Otolemur_garnettii
ENSELUG00000015265	prdm4	99	60.024	ENSOARG00000017955	PRDM4	99	60.510	Ovis_aries
ENSELUG00000015265	prdm4	99	60.753	ENSPPAG00000038438	PRDM4	99	60.510	Pan_paniscus
ENSELUG00000015265	prdm4	99	60.146	ENSPPRG00000004144	PRDM4	99	60.510	Panthera_pardus
ENSELUG00000015265	prdm4	99	60.146	ENSPTIG00000005847	PRDM4	99	60.510	Panthera_tigris_altaica
ENSELUG00000015265	prdm4	93	62.857	ENSPTRG00000005400	PRDM4	99	60.510	Pan_troglodytes
ENSELUG00000015265	prdm4	99	60.753	ENSPANG00000022084	PRDM4	99	60.510	Papio_anubis
ENSELUG00000015265	prdm4	100	73.902	ENSPKIG00000000875	prdm4	100	73.902	Paramormyrops_kingsleyae
ENSELUG00000015265	prdm4	85	69.022	ENSPSIG00000012066	PRDM4	99	69.022	Pelodiscus_sinensis
ENSELUG00000015265	prdm4	99	60.510	ENSPEMG00000014598	Prdm4	99	60.267	Peromyscus_maniculatus_bairdii
ENSELUG00000015265	prdm4	94	62.176	ENSPCIG00000009471	PRDM4	98	60.162	Phascolarctos_cinereus
ENSELUG00000015265	prdm4	99	60.510	ENSPPYG00000004913	PRDM4	99	60.267	Pongo_abelii
ENSELUG00000015265	prdm4	84	61.364	ENSPCAG00000009987	PRDM4	83	61.364	Procavia_capensis
ENSELUG00000015265	prdm4	99	60.632	ENSPCOG00000021060	PRDM4	99	60.389	Propithecus_coquereli
ENSELUG00000015265	prdm4	99	60.267	ENSPVAG00000001596	PRDM4	99	60.510	Pteropus_vampyrus
ENSELUG00000015265	prdm4	94	61.776	ENSRNOG00000004962	Prdm4	95	61.905	Rattus_norvegicus
ENSELUG00000015265	prdm4	99	60.753	ENSRBIG00000035488	PRDM4	99	60.510	Rhinopithecus_bieti
ENSELUG00000015265	prdm4	99	60.753	ENSRROG00000012779	PRDM4	99	60.510	Rhinopithecus_roxellana
ENSELUG00000015265	prdm4	99	62.874	ENSSBOG00000000403	PRDM4	99	62.874	Saimiri_boliviensis_boliviensis
ENSELUG00000015265	prdm4	99	74.782	ENSSFOG00015023358	prdm4	99	74.532	Scleropages_formosus
ENSELUG00000015265	prdm4	99	60.267	ENSSSCG00000000160	PRDM4	99	60.389	Sus_scrofa
ENSELUG00000015265	prdm4	99	60.171	ENSTGUG00000010962	-	99	59.562	Taeniopygia_guttata
ENSELUG00000015265	prdm4	80	54.139	ENSTBEG00000001732	PRDM4	84	53.808	Tupaia_belangeri
ENSELUG00000015265	prdm4	99	60.267	ENSTTRG00000011056	PRDM4	99	60.510	Tursiops_truncatus
ENSELUG00000015265	prdm4	99	60.389	ENSUAMG00000022796	PRDM4	99	60.753	Ursus_americanus
ENSELUG00000015265	prdm4	99	60.389	ENSUMAG00000017231	PRDM4	99	60.753	Ursus_maritimus
ENSELUG00000015265	prdm4	99	60.267	ENSVPAG00000002215	PRDM4	99	60.389	Vicugna_pacos
ENSELUG00000015265	prdm4	93	62.078	ENSVVUG00000023397	PRDM4	99	60.510	Vulpes_vulpes