EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000015417 (Gene tree)
Gene ID: 105018509
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 24794 bases
Position: chrLG19:26308874-26333667
Accession: 105018509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000015415	CPSF_A	PF03178.15	1.1e-98	1	1
ENSELUP00000015420	CPSF_A	PF03178.15	2.2e-91	1	1
ENSELUP00000015376	CPSF_A	PF03178.15	2.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000024478	-	5163	XM_020040524	ENSELUP00000015415	1217 (aa)	XP_019896083	UPI0009733C96
ENSELUT00000024431	-	2826	-	ENSELUP00000015376	941 (aa)	-	-
ENSELUT00000024491	-	5472	-	ENSELUP00000015420	1175 (aa)	-	-

Gene Model

Click here to download ENSELUG00000015417's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015417	sf3b3	100	91.393	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSELUG00000015417	sf3b3	99	95.574	ENSAPOG00000006172	sf3b3	98	95.574	Acanthochromis_polyacanthus
ENSELUG00000015417	sf3b3	100	91.251	ENSAMEG00000002187	SF3B3	100	91.251	Ailuropoda_melanoleuca
ENSELUG00000015417	sf3b3	92	92.965	ENSACIG00000016487	sf3b3	100	92.965	Amphilophus_citrinellus
ENSELUG00000015417	sf3b3	100	95.656	ENSAOCG00000007158	sf3b3	100	95.656	Amphiprion_ocellaris
ENSELUG00000015417	sf3b3	100	95.656	ENSAPEG00000022786	sf3b3	100	95.656	Amphiprion_percula
ENSELUG00000015417	sf3b3	100	96.066	ENSATEG00000013708	sf3b3	100	96.066	Anabas_testudineus
ENSELUG00000015417	sf3b3	99	84.919	ENSAPLG00000004996	SF3B3	99	90.679	Anas_platyrhynchos
ENSELUG00000015417	sf3b3	100	91.639	ENSACAG00000001817	SF3B3	100	91.639	Anolis_carolinensis
ENSELUG00000015417	sf3b3	100	91.393	ENSANAG00000028001	SF3B3	100	91.393	Aotus_nancymaae
ENSELUG00000015417	sf3b3	99	95.830	ENSACLG00000022555	sf3b3	98	95.830	Astatotilapia_calliptera
ENSELUG00000015417	sf3b3	100	96.557	ENSAMXG00000003410	sf3b3	100	96.557	Astyanax_mexicanus
ENSELUG00000015417	sf3b3	100	91.393	ENSBTAG00000010627	SF3B3	100	91.393	Bos_taurus
ENSELUG00000015417	sf3b3	100	59.238	WBGene00019323	teg-4	100	59.238	Caenorhabditis_elegans
ENSELUG00000015417	sf3b3	100	91.393	ENSCJAG00000014773	SF3B3	99	91.393	Callithrix_jacchus
ENSELUG00000015417	sf3b3	100	91.475	ENSCAFG00000020151	SF3B3	100	91.475	Canis_familiaris
ENSELUG00000015417	sf3b3	100	91.475	ENSCAFG00020020912	SF3B3	100	91.475	Canis_lupus_dingo
ENSELUG00000015417	sf3b3	100	91.475	ENSCHIG00000019822	SF3B3	100	91.475	Capra_hircus
ENSELUG00000015417	sf3b3	100	91.393	ENSTSYG00000007910	SF3B3	100	91.393	Carlito_syrichta
ENSELUG00000015417	sf3b3	86	79.634	ENSCAPG00000001484	SF3B3	95	79.634	Cavia_aperea
ENSELUG00000015417	sf3b3	100	90.082	ENSCPOG00000000586	SF3B3	100	90.082	Cavia_porcellus
ENSELUG00000015417	sf3b3	100	91.393	ENSCCAG00000017736	SF3B3	100	91.393	Cebus_capucinus
ENSELUG00000015417	sf3b3	100	91.393	ENSCATG00000036562	SF3B3	100	91.393	Cercocebus_atys
ENSELUG00000015417	sf3b3	100	91.393	ENSCLAG00000003921	SF3B3	100	91.393	Chinchilla_lanigera
ENSELUG00000015417	sf3b3	100	91.393	ENSCSAG00000004371	SF3B3	100	91.393	Chlorocebus_sabaeus
ENSELUG00000015417	sf3b3	90	89.720	ENSCHOG00000001878	SF3B3	90	89.720	Choloepus_hoffmanni
ENSELUG00000015417	sf3b3	100	91.230	ENSCPBG00000015853	SF3B3	100	91.230	Chrysemys_picta_bellii
ENSELUG00000015417	sf3b3	100	77.887	ENSCING00000001342	-	100	77.887	Ciona_intestinalis
ENSELUG00000015417	sf3b3	99	76.904	ENSCSAVG00000011454	-	100	76.904	Ciona_savignyi
ENSELUG00000015417	sf3b3	100	87.787	ENSCANG00000042920	SF3B3	100	88.279	Colobus_angolensis_palliatus
ENSELUG00000015417	sf3b3	100	91.311	ENSCGRG00001015908	Sf3b3	100	91.311	Cricetulus_griseus_chok1gshd
ENSELUG00000015417	sf3b3	100	91.311	ENSCGRG00000010180	Sf3b3	100	91.311	Cricetulus_griseus_crigri
ENSELUG00000015417	sf3b3	99	88.675	ENSCSEG00000014192	sf3b3	99	93.632	Cynoglossus_semilaevis
ENSELUG00000015417	sf3b3	100	95.328	ENSCVAG00000010459	sf3b3	100	95.328	Cyprinodon_variegatus
ENSELUG00000015417	sf3b3	100	95.656	ENSDARG00000103553	sf3b3	100	95.656	Danio_rerio
ENSELUG00000015417	sf3b3	85	90.769	ENSDNOG00000043626	SF3B3	100	90.769	Dasypus_novemcinctus
ENSELUG00000015417	sf3b3	100	91.393	ENSDORG00000014176	Sf3b3	100	91.393	Dipodomys_ordii
ENSELUG00000015417	sf3b3	100	73.236	FBgn0035162	Sf3b3	100	73.236	Drosophila_melanogaster
ENSELUG00000015417	sf3b3	84	95.781	ENSETEG00000002729	SF3B3	84	95.781	Echinops_telfairi
ENSELUG00000015417	sf3b3	100	84.590	ENSEBUG00000006117	sf3b3	100	84.590	Eptatretus_burgeri
ENSELUG00000015417	sf3b3	100	91.475	ENSEASG00005013376	SF3B3	100	91.475	Equus_asinus_asinus
ENSELUG00000015417	sf3b3	100	91.475	ENSECAG00000014053	SF3B3	100	91.475	Equus_caballus
ENSELUG00000015417	sf3b3	93	90.179	ENSEEUG00000015611	SF3B3	93	90.179	Erinaceus_europaeus
ENSELUG00000015417	sf3b3	100	91.475	ENSFCAG00000009487	SF3B3	100	91.475	Felis_catus
ENSELUG00000015417	sf3b3	100	90.984	ENSFALG00000007372	SF3B3	100	90.984	Ficedula_albicollis
ENSELUG00000015417	sf3b3	100	91.393	ENSFDAG00000002608	SF3B3	100	91.393	Fukomys_damarensis
ENSELUG00000015417	sf3b3	100	96.066	ENSFHEG00000017824	sf3b3	100	96.066	Fundulus_heteroclitus
ENSELUG00000015417	sf3b3	100	92.547	ENSGMOG00000008139	sf3b3	100	92.547	Gadus_morhua
ENSELUG00000015417	sf3b3	100	91.230	ENSGALG00000002531	SF3B3	100	91.230	Gallus_gallus
ENSELUG00000015417	sf3b3	100	95.410	ENSGAFG00000015206	sf3b3	100	95.410	Gambusia_affinis
ENSELUG00000015417	sf3b3	100	95.332	ENSGACG00000002646	sf3b3	100	95.332	Gasterosteus_aculeatus
ENSELUG00000015417	sf3b3	99	91.319	ENSGAGG00000006746	SF3B3	97	91.319	Gopherus_agassizii
ENSELUG00000015417	sf3b3	100	91.393	ENSGGOG00000003246	SF3B3	100	91.393	Gorilla_gorilla
ENSELUG00000015417	sf3b3	92	87.801	ENSHBUG00000005960	sf3b3	100	88.780	Haplochromis_burtoni
ENSELUG00000015417	sf3b3	100	91.393	ENSHGLG00000010135	SF3B3	100	91.393	Heterocephalus_glaber_female
ENSELUG00000015417	sf3b3	100	89.320	ENSHGLG00100011148	SF3B3	100	89.320	Heterocephalus_glaber_male
ENSELUG00000015417	sf3b3	100	95.738	ENSHCOG00000011981	sf3b3	100	95.738	Hippocampus_comes
ENSELUG00000015417	sf3b3	100	96.148	ENSIPUG00000020435	sf3b3	100	96.148	Ictalurus_punctatus
ENSELUG00000015417	sf3b3	100	91.393	ENSSTOG00000007065	SF3B3	100	91.393	Ictidomys_tridecemlineatus
ENSELUG00000015417	sf3b3	100	91.393	ENSJJAG00000003948	Sf3b3	100	91.393	Jaculus_jaculus
ENSELUG00000015417	sf3b3	99	95.489	ENSKMAG00000004066	sf3b3	99	95.489	Kryptolebias_marmoratus
ENSELUG00000015417	sf3b3	100	95.574	ENSLBEG00000018302	sf3b3	100	95.574	Labrus_bergylta
ENSELUG00000015417	sf3b3	98	88.235	ENSLACG00000012501	SF3B3	99	88.235	Latimeria_chalumnae
ENSELUG00000015417	sf3b3	100	95.250	ENSLOCG00000007566	sf3b3	100	95.250	Lepisosteus_oculatus
ENSELUG00000015417	sf3b3	100	91.475	ENSLAFG00000012219	SF3B3	100	91.475	Loxodonta_africana
ENSELUG00000015417	sf3b3	100	91.393	ENSMFAG00000045487	SF3B3	100	91.393	Macaca_fascicularis
ENSELUG00000015417	sf3b3	100	91.393	ENSMMUG00000017812	SF3B3	100	91.393	Macaca_mulatta
ENSELUG00000015417	sf3b3	100	91.393	ENSMNEG00000033385	SF3B3	100	91.393	Macaca_nemestrina
ENSELUG00000015417	sf3b3	100	87.869	ENSMLEG00000043891	SF3B3	100	87.869	Mandrillus_leucophaeus
ENSELUG00000015417	sf3b3	100	96.066	ENSMAMG00000016837	sf3b3	100	96.066	Mastacembelus_armatus
ENSELUG00000015417	sf3b3	100	95.984	ENSMZEG00005010836	sf3b3	100	95.984	Maylandia_zebra
ENSELUG00000015417	sf3b3	89	92.620	ENSMZEG00005026015	sf3b3	99	92.620	Maylandia_zebra
ENSELUG00000015417	sf3b3	100	91.230	ENSMGAG00000001597	SF3B3	100	91.230	Meleagris_gallopavo
ENSELUG00000015417	sf3b3	84	76.155	ENSMAUG00000013618	Sf3b3	95	76.529	Mesocricetus_auratus
ENSELUG00000015417	sf3b3	100	90.507	ENSMICG00000001363	SF3B3	100	90.507	Microcebus_murinus
ENSELUG00000015417	sf3b3	100	91.311	ENSMOCG00000006108	Sf3b3	100	91.311	Microtus_ochrogaster
ENSELUG00000015417	sf3b3	89	92.804	ENSMMOG00000002598	sf3b3	97	92.804	Mola_mola
ENSELUG00000015417	sf3b3	100	87.387	ENSMODG00000014363	SF3B3	100	87.387	Monodelphis_domestica
ENSELUG00000015417	sf3b3	100	95.492	ENSMALG00000008014	sf3b3	100	95.492	Monopterus_albus
ENSELUG00000015417	sf3b3	100	91.311	MGP_CAROLIEiJ_G0031563	Sf3b3	100	91.311	Mus_caroli
ENSELUG00000015417	sf3b3	100	91.311	ENSMUSG00000033732	Sf3b3	100	91.311	Mus_musculus
ENSELUG00000015417	sf3b3	100	91.311	MGP_SPRETEiJ_G0032681	Sf3b3	100	91.311	Mus_spretus
ENSELUG00000015417	sf3b3	100	91.475	ENSMPUG00000010277	SF3B3	100	91.475	Mustela_putorius_furo
ENSELUG00000015417	sf3b3	100	91.393	ENSMLUG00000014607	SF3B3	100	91.393	Myotis_lucifugus
ENSELUG00000015417	sf3b3	100	91.393	ENSNGAG00000021903	Sf3b3	100	91.393	Nannospalax_galili
ENSELUG00000015417	sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSELUG00000015417	sf3b3	100	89.926	ENSNLEG00000016127	SF3B3	100	89.926	Nomascus_leucogenys
ENSELUG00000015417	sf3b3	92	88.874	ENSMEUG00000004479	SF3B3	94	88.874	Notamacropus_eugenii
ENSELUG00000015417	sf3b3	98	88.211	ENSOPRG00000009847	SF3B3	100	88.211	Ochotona_princeps
ENSELUG00000015417	sf3b3	100	91.393	ENSODEG00000014154	SF3B3	100	91.393	Octodon_degus
ENSELUG00000015417	sf3b3	100	95.902	ENSONIG00000011198	sf3b3	100	95.902	Oreochromis_niloticus
ENSELUG00000015417	sf3b3	100	91.557	ENSOANG00000001161	-	100	91.557	Ornithorhynchus_anatinus
ENSELUG00000015417	sf3b3	100	89.593	ENSOCUG00000004139	SF3B3	100	89.593	Oryctolagus_cuniculus
ENSELUG00000015417	sf3b3	100	95.164	ENSORLG00000013472	sf3b3	100	95.164	Oryzias_latipes
ENSELUG00000015417	sf3b3	100	95.164	ENSORLG00020017473	sf3b3	100	95.164	Oryzias_latipes_hni
ENSELUG00000015417	sf3b3	100	95.328	ENSORLG00015007710	sf3b3	100	95.328	Oryzias_latipes_hsok
ENSELUG00000015417	sf3b3	100	95.082	ENSOMEG00000014483	sf3b3	100	95.082	Oryzias_melastigma
ENSELUG00000015417	sf3b3	100	91.169	ENSOGAG00000016051	SF3B3	100	91.169	Otolemur_garnettii
ENSELUG00000015417	sf3b3	100	91.251	ENSOARG00000004816	SF3B3	100	91.251	Ovis_aries
ENSELUG00000015417	sf3b3	100	91.393	ENSPPAG00000026807	SF3B3	100	91.393	Pan_paniscus
ENSELUG00000015417	sf3b3	100	91.475	ENSPPRG00000001686	SF3B3	100	91.475	Panthera_pardus
ENSELUG00000015417	sf3b3	89	88.349	ENSPTIG00000020382	SF3B3	100	88.349	Panthera_tigris_altaica
ENSELUG00000015417	sf3b3	100	91.393	ENSPTRG00000008308	SF3B3	100	91.393	Pan_troglodytes
ENSELUG00000015417	sf3b3	100	91.393	ENSPANG00000024075	SF3B3	100	91.393	Papio_anubis
ENSELUG00000015417	sf3b3	100	95.738	ENSPKIG00000002712	sf3b3	100	95.738	Paramormyrops_kingsleyae
ENSELUG00000015417	sf3b3	89	91.009	ENSPSIG00000002232	SF3B3	100	91.009	Pelodiscus_sinensis
ENSELUG00000015417	sf3b3	100	91.311	ENSPEMG00000008603	Sf3b3	100	91.311	Peromyscus_maniculatus_bairdii
ENSELUG00000015417	sf3b3	100	89.098	ENSPMAG00000001793	sf3b3	100	89.098	Petromyzon_marinus
ENSELUG00000015417	sf3b3	100	91.557	ENSPCIG00000014927	SF3B3	100	91.557	Phascolarctos_cinereus
ENSELUG00000015417	sf3b3	100	95.656	ENSPFOG00000015516	sf3b3	100	95.656	Poecilia_formosa
ENSELUG00000015417	sf3b3	100	95.656	ENSPLAG00000014330	sf3b3	100	95.656	Poecilia_latipinna
ENSELUG00000015417	sf3b3	100	95.738	ENSPMEG00000019856	sf3b3	100	95.738	Poecilia_mexicana
ENSELUG00000015417	sf3b3	99	88.878	ENSPREG00000019669	sf3b3	97	95.238	Poecilia_reticulata
ENSELUG00000015417	sf3b3	95	93.284	ENSPPYG00000007539	SF3B3	100	93.284	Pongo_abelii
ENSELUG00000015417	sf3b3	100	72.391	ENSPCAG00000002623	SF3B3	100	72.391	Procavia_capensis
ENSELUG00000015417	sf3b3	90	95.077	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSELUG00000015417	sf3b3	100	91.393	ENSPVAG00000000684	SF3B3	100	91.393	Pteropus_vampyrus
ENSELUG00000015417	sf3b3	100	95.902	ENSPNYG00000003528	sf3b3	100	95.902	Pundamilia_nyererei
ENSELUG00000015417	sf3b3	100	96.475	ENSPNAG00000015419	sf3b3	100	96.475	Pygocentrus_nattereri
ENSELUG00000015417	sf3b3	100	91.311	ENSRNOG00000017724	Sf3b3	100	91.311	Rattus_norvegicus
ENSELUG00000015417	sf3b3	100	91.393	ENSRBIG00000021904	SF3B3	100	91.393	Rhinopithecus_bieti
ENSELUG00000015417	sf3b3	100	91.393	ENSRROG00000045703	SF3B3	100	91.393	Rhinopithecus_roxellana
ENSELUG00000015417	sf3b3	100	91.393	ENSSBOG00000029156	SF3B3	100	91.393	Saimiri_boliviensis_boliviensis
ENSELUG00000015417	sf3b3	100	91.557	ENSSHAG00000000372	SF3B3	100	91.557	Sarcophilus_harrisii
ENSELUG00000015417	sf3b3	100	96.148	ENSSFOG00015012877	sf3b3	100	96.148	Scleropages_formosus
ENSELUG00000015417	sf3b3	100	95.246	ENSSMAG00000014386	sf3b3	100	95.246	Scophthalmus_maximus
ENSELUG00000015417	sf3b3	100	96.475	ENSSDUG00000021201	sf3b3	100	96.475	Seriola_dumerili
ENSELUG00000015417	sf3b3	100	96.393	ENSSLDG00000017532	sf3b3	100	96.393	Seriola_lalandi_dorsalis
ENSELUG00000015417	sf3b3	99	86.120	ENSSARG00000006917	SF3B3	93	91.304	Sorex_araneus
ENSELUG00000015417	sf3b3	100	91.311	ENSSPUG00000006253	SF3B3	100	91.311	Sphenodon_punctatus
ENSELUG00000015417	sf3b3	100	88.361	ENSSPAG00000003125	sf3b3	100	88.361	Stegastes_partitus
ENSELUG00000015417	sf3b3	100	91.475	ENSSSCG00000025323	SF3B3	100	91.475	Sus_scrofa
ENSELUG00000015417	sf3b3	100	91.155	ENSTGUG00000006082	SF3B3	100	91.155	Taeniopygia_guttata
ENSELUG00000015417	sf3b3	50	87.585	ENSTRUG00000015623	sf3b3	88	87.585	Takifugu_rubripes
ENSELUG00000015417	sf3b3	93	95.050	ENSTNIG00000004857	sf3b3	100	95.050	Tetraodon_nigroviridis
ENSELUG00000015417	sf3b3	97	78.961	ENSTBEG00000002946	SF3B3	100	78.961	Tupaia_belangeri
ENSELUG00000015417	sf3b3	100	90.738	ENSTTRG00000005855	SF3B3	100	90.738	Tursiops_truncatus
ENSELUG00000015417	sf3b3	100	91.475	ENSUAMG00000006780	SF3B3	100	91.475	Ursus_americanus
ENSELUG00000015417	sf3b3	100	91.475	ENSUMAG00000017757	SF3B3	100	91.475	Ursus_maritimus
ENSELUG00000015417	sf3b3	100	76.393	ENSVPAG00000003202	SF3B3	100	76.393	Vicugna_pacos
ENSELUG00000015417	sf3b3	100	91.557	ENSVVUG00000017922	SF3B3	100	91.557	Vulpes_vulpes
ENSELUG00000015417	sf3b3	100	91.393	ENSXETG00000032869	SF3B3	100	91.393	Xenopus_tropicalis
ENSELUG00000015417	sf3b3	95	88.783	ENSXCOG00000013628	sf3b3	97	95.344	Xiphophorus_couchianus
ENSELUG00000015417	sf3b3	100	95.656	ENSXMAG00000006334	sf3b3	100	95.656	Xiphophorus_maculatus