EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000015424 (Gene tree)
Gene ID: 105017834
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10319 bases
Position: chrLG18:18934002-18944320
Accession: 105017834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036170	Suf	PF05843.14	4.9e-14	1	1
ENSELUP00000036170	HAT	PF02184.16	5.1e-29	1	2
ENSELUP00000036170	HAT	PF02184.16	5.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039364	-	2118	XM_010882753	ENSELUP00000036170	705 (aa)	XP_010881055	-

Gene Model

Click here to download ENSELUG00000015424's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015424	crnkl1	97	84.357	ENSG00000101343	CRNKL1	97	85.329	Homo_sapiens
ENSELUG00000015424	crnkl1	97	90.351	ENSAPOG00000009705	crnkl1	96	91.018	Acanthochromis_polyacanthus
ENSELUG00000015424	crnkl1	97	84.897	ENSAMEG00000000270	CRNKL1	81	86.119	Ailuropoda_melanoleuca
ENSELUG00000015424	crnkl1	95	89.318	ENSACIG00000015267	crnkl1	89	89.820	Amphilophus_citrinellus
ENSELUG00000015424	crnkl1	97	90.058	ENSAOCG00000021964	crnkl1	88	91.754	Amphiprion_ocellaris
ENSELUG00000015424	crnkl1	99	88.085	ENSAPEG00000015041	crnkl1	89	91.904	Amphiprion_percula
ENSELUG00000015424	crnkl1	99	87.006	ENSATEG00000001068	crnkl1	88	90.448	Anabas_testudineus
ENSELUG00000015424	crnkl1	97	82.190	ENSAPLG00000013105	CRNKL1	97	83.707	Anas_platyrhynchos
ENSELUG00000015424	crnkl1	97	85.924	ENSACAG00000005284	CRNKL1	98	87.126	Anolis_carolinensis
ENSELUG00000015424	crnkl1	89	85.397	ENSANAG00000024889	CRNKL1	99	85.397	Aotus_nancymaae
ENSELUG00000015424	crnkl1	99	87.589	ENSACLG00000010813	crnkl1	88	90.705	Astatotilapia_calliptera
ENSELUG00000015424	crnkl1	94	91.278	ENSAMXG00000018334	crnkl1	90	91.031	Astyanax_mexicanus
ENSELUG00000015424	crnkl1	97	84.942	ENSBTAG00000008472	CRNKL1	96	86.377	Bos_taurus
ENSELUG00000015424	crnkl1	91	63.764	WBGene00019762	M03F8.3	89	63.801	Caenorhabditis_elegans
ENSELUG00000015424	crnkl1	97	84.649	ENSCJAG00000005393	CRNKL1	97	85.629	Callithrix_jacchus
ENSELUG00000015424	crnkl1	96	84.831	ENSCAFG00000005333	CRNKL1	92	86.377	Canis_familiaris
ENSELUG00000015424	crnkl1	97	84.942	ENSCAFG00020027488	CRNKL1	97	86.377	Canis_lupus_dingo
ENSELUG00000015424	crnkl1	97	83.819	ENSCHIG00000013171	CRNKL1	97	84.925	Capra_hircus
ENSELUG00000015424	crnkl1	97	84.425	ENSTSYG00000004197	CRNKL1	97	85.629	Carlito_syrichta
ENSELUG00000015424	crnkl1	91	81.965	ENSCAPG00000010501	CRNKL1	97	83.527	Cavia_aperea
ENSELUG00000015424	crnkl1	97	83.333	ENSCPOG00000004418	CRNKL1	97	84.731	Cavia_porcellus
ENSELUG00000015424	crnkl1	97	84.795	ENSCCAG00000027037	CRNKL1	97	85.778	Cebus_capucinus
ENSELUG00000015424	crnkl1	97	84.503	ENSCATG00000034247	CRNKL1	97	85.479	Cercocebus_atys
ENSELUG00000015424	crnkl1	97	83.697	ENSCLAG00000013859	CRNKL1	98	84.776	Chinchilla_lanigera
ENSELUG00000015424	crnkl1	97	84.503	ENSCSAG00000011434	CRNKL1	97	85.479	Chlorocebus_sabaeus
ENSELUG00000015424	crnkl1	97	84.164	ENSCHOG00000006371	CRNKL1	82	85.373	Choloepus_hoffmanni
ENSELUG00000015424	crnkl1	97	85.985	ENSCPBG00000023501	CRNKL1	98	87.294	Chrysemys_picta_bellii
ENSELUG00000015424	crnkl1	95	68.413	ENSCING00000002709	-	97	68.413	Ciona_intestinalis
ENSELUG00000015424	crnkl1	97	84.503	ENSCANG00000038789	CRNKL1	97	85.479	Colobus_angolensis_palliatus
ENSELUG00000015424	crnkl1	98	83.599	ENSCGRG00001001115	-	97	85.180	Cricetulus_griseus_chok1gshd
ENSELUG00000015424	crnkl1	98	83.599	ENSCGRG00001000687	-	97	85.180	Cricetulus_griseus_chok1gshd
ENSELUG00000015424	crnkl1	98	83.599	ENSCGRG00000007854	Crnkl1	97	85.180	Cricetulus_griseus_crigri
ENSELUG00000015424	crnkl1	94	91.004	ENSCSEG00000005594	crnkl1	99	91.004	Cynoglossus_semilaevis
ENSELUG00000015424	crnkl1	94	89.505	ENSCVAG00000015172	crnkl1	90	89.505	Cyprinodon_variegatus
ENSELUG00000015424	crnkl1	94	91.554	ENSDARG00000007901	crnkl1	89	91.330	Danio_rerio
ENSELUG00000015424	crnkl1	97	84.448	ENSDNOG00000016226	CRNKL1	93	86.078	Dasypus_novemcinctus
ENSELUG00000015424	crnkl1	97	83.694	ENSDORG00000000394	-	98	84.763	Dipodomys_ordii
ENSELUG00000015424	crnkl1	94	78.829	ENSDORG00000023724	-	98	78.829	Dipodomys_ordii
ENSELUG00000015424	crnkl1	94	78.293	ENSDORG00000030174	-	99	78.293	Dipodomys_ordii
ENSELUG00000015424	crnkl1	93	68.018	FBgn0000377	crn	95	68.018	Drosophila_melanogaster
ENSELUG00000015424	crnkl1	97	74.708	ENSETEG00000003711	CRNKL1	82	75.749	Echinops_telfairi
ENSELUG00000015424	crnkl1	96	60.563	ENSEBUG00000013461	crnkl1	94	58.234	Eptatretus_burgeri
ENSELUG00000015424	crnkl1	97	85.234	ENSEASG00005002072	CRNKL1	98	86.119	Equus_asinus_asinus
ENSELUG00000015424	crnkl1	97	85.234	ENSECAG00000022215	CRNKL1	98	86.119	Equus_caballus
ENSELUG00000015424	crnkl1	97	82.258	ENSEEUG00000000413	CRNKL1	90	83.433	Erinaceus_europaeus
ENSELUG00000015424	crnkl1	97	85.007	ENSFCAG00000000714	CRNKL1	98	86.119	Felis_catus
ENSELUG00000015424	crnkl1	95	83.458	ENSFALG00000004611	CRNKL1	97	85.191	Ficedula_albicollis
ENSELUG00000015424	crnkl1	97	84.234	ENSFDAG00000000604	CRNKL1	98	85.075	Fukomys_damarensis
ENSELUG00000015424	crnkl1	96	89.513	ENSFHEG00000013163	crnkl1	87	90.405	Fundulus_heteroclitus
ENSELUG00000015424	crnkl1	95	89.985	ENSGMOG00000007609	crnkl1	92	89.985	Gadus_morhua
ENSELUG00000015424	crnkl1	97	84.526	ENSGALG00000008429	CRNKL1	98	86.099	Gallus_gallus
ENSELUG00000015424	crnkl1	97	87.773	ENSGAFG00000014249	crnkl1	88	89.355	Gambusia_affinis
ENSELUG00000015424	crnkl1	99	85.836	ENSGACG00000011852	crnkl1	89	89.820	Gasterosteus_aculeatus
ENSELUG00000015424	crnkl1	93	83.969	ENSGAGG00000021233	CRNKL1	97	85.558	Gopherus_agassizii
ENSELUG00000015424	crnkl1	97	84.357	ENSGGOG00000014176	CRNKL1	97	85.329	Gorilla_gorilla
ENSELUG00000015424	crnkl1	99	87.589	ENSHBUG00000005246	crnkl1	88	90.705	Haplochromis_burtoni
ENSELUG00000015424	crnkl1	97	83.918	ENSHGLG00000010856	CRNKL1	97	85.329	Heterocephalus_glaber_female
ENSELUG00000015424	crnkl1	97	83.918	ENSHGLG00100011521	CRNKL1	97	85.329	Heterocephalus_glaber_male
ENSELUG00000015424	crnkl1	95	87.874	ENSHCOG00000006420	crnkl1	96	87.874	Hippocampus_comes
ENSELUG00000015424	crnkl1	96	76.549	ENSIPUG00000006836	-	98	77.211	Ictalurus_punctatus
ENSELUG00000015424	crnkl1	90	71.496	ENSIPUG00000000315	-	99	71.496	Ictalurus_punctatus
ENSELUG00000015424	crnkl1	96	86.404	ENSIPUG00000006751	crnkl1	90	88.974	Ictalurus_punctatus
ENSELUG00000015424	crnkl1	97	84.357	ENSSTOG00000014747	CRNKL1	97	85.778	Ictidomys_tridecemlineatus
ENSELUG00000015424	crnkl1	97	82.646	ENSJJAG00000016926	Crnkl1	98	83.673	Jaculus_jaculus
ENSELUG00000015424	crnkl1	98	88.712	ENSKMAG00000003620	crnkl1	85	91.031	Kryptolebias_marmoratus
ENSELUG00000015424	crnkl1	94	73.403	ENSLBEG00000003543	crnkl1	89	74.925	Labrus_bergylta
ENSELUG00000015424	crnkl1	96	87.740	ENSLACG00000001129	CRNKL1	98	87.892	Latimeria_chalumnae
ENSELUG00000015424	crnkl1	94	91.141	ENSLOCG00000016889	crnkl1	93	91.031	Lepisosteus_oculatus
ENSELUG00000015424	crnkl1	97	83.796	ENSLAFG00000004512	CRNKL1	97	85.949	Loxodonta_africana
ENSELUG00000015424	crnkl1	97	84.503	ENSMFAG00000039893	CRNKL1	97	85.479	Macaca_fascicularis
ENSELUG00000015424	crnkl1	97	84.503	ENSMMUG00000007709	CRNKL1	97	85.479	Macaca_mulatta
ENSELUG00000015424	crnkl1	97	84.503	ENSMNEG00000037490	CRNKL1	97	85.479	Macaca_nemestrina
ENSELUG00000015424	crnkl1	97	84.503	ENSMLEG00000034885	CRNKL1	97	85.479	Mandrillus_leucophaeus
ENSELUG00000015424	crnkl1	99	86.950	ENSMAMG00000008757	crnkl1	96	90.855	Mastacembelus_armatus
ENSELUG00000015424	crnkl1	99	87.589	ENSMZEG00005022345	crnkl1	89	90.705	Maylandia_zebra
ENSELUG00000015424	crnkl1	97	84.279	ENSMGAG00000003452	CRNKL1	92	85.842	Meleagris_gallopavo
ENSELUG00000015424	crnkl1	98	83.599	ENSMAUG00000020764	Crnkl1	97	85.180	Mesocricetus_auratus
ENSELUG00000015424	crnkl1	97	84.503	ENSMICG00000006048	CRNKL1	97	85.629	Microcebus_murinus
ENSELUG00000015424	crnkl1	98	76.034	ENSMOCG00000000681	-	97	77.353	Microtus_ochrogaster
ENSELUG00000015424	crnkl1	94	61.295	ENSMOCG00000004179	-	95	61.194	Microtus_ochrogaster
ENSELUG00000015424	crnkl1	90	87.362	ENSMMOG00000017601	crnkl1	97	87.362	Mola_mola
ENSELUG00000015424	crnkl1	97	84.127	ENSMODG00000005961	-	96	85.377	Monodelphis_domestica
ENSELUG00000015424	crnkl1	97	79.476	ENSMODG00000010857	-	97	80.988	Monodelphis_domestica
ENSELUG00000015424	crnkl1	96	64.941	ENSMALG00000011211	crnkl1	88	68.452	Monopterus_albus
ENSELUG00000015424	crnkl1	98	83.890	MGP_CAROLIEiJ_G0024394	Crnkl1	97	85.224	Mus_caroli
ENSELUG00000015424	crnkl1	97	84.064	ENSMUSG00000001767	Crnkl1	97	85.479	Mus_musculus
ENSELUG00000015424	crnkl1	97	82.895	MGP_PahariEiJ_G0025838	Crnkl1	97	84.281	Mus_pahari
ENSELUG00000015424	crnkl1	97	84.064	MGP_SPRETEiJ_G0025312	Crnkl1	97	85.479	Mus_spretus
ENSELUG00000015424	crnkl1	97	85.007	ENSMPUG00000001226	CRNKL1	98	86.119	Mustela_putorius_furo
ENSELUG00000015424	crnkl1	97	84.773	ENSMLUG00000016513	CRNKL1	87	85.991	Myotis_lucifugus
ENSELUG00000015424	crnkl1	97	82.783	ENSNGAG00000023097	Crnkl1	97	84.141	Nannospalax_galili
ENSELUG00000015424	crnkl1	99	87.840	ENSNBRG00000007867	crnkl1	99	90.855	Neolamprologus_brichardi
ENSELUG00000015424	crnkl1	97	81.552	ENSNLEG00000009862	CRNKL1	97	82.459	Nomascus_leucogenys
ENSELUG00000015424	crnkl1	95	85.351	ENSMEUG00000012167	-	97	86.677	Notamacropus_eugenii
ENSELUG00000015424	crnkl1	97	79.941	ENSMEUG00000002361	-	97	80.717	Notamacropus_eugenii
ENSELUG00000015424	crnkl1	73	58.366	ENSOPRG00000009242	-	61	58.366	Ochotona_princeps
ENSELUG00000015424	crnkl1	97	83.552	ENSODEG00000012175	CRNKL1	98	84.627	Octodon_degus
ENSELUG00000015424	crnkl1	99	87.732	ENSONIG00000018728	crnkl1	99	90.855	Oreochromis_niloticus
ENSELUG00000015424	crnkl1	96	83.748	ENSOCUG00000015484	CRNKL1	81	85.821	Oryctolagus_cuniculus
ENSELUG00000015424	crnkl1	96	88.148	ENSORLG00000017240	crnkl1	94	85.015	Oryzias_latipes
ENSELUG00000015424	crnkl1	96	88.296	ENSORLG00020001742	crnkl1	89	89.055	Oryzias_latipes_hni
ENSELUG00000015424	crnkl1	96	88.296	ENSORLG00015019564	crnkl1	89	89.055	Oryzias_latipes_hsok
ENSELUG00000015424	crnkl1	97	87.994	ENSOMEG00000019895	crnkl1	89	89.355	Oryzias_melastigma
ENSELUG00000015424	crnkl1	97	84.548	ENSOGAG00000011544	CRNKL1	97	85.778	Otolemur_garnettii
ENSELUG00000015424	crnkl1	96	84.728	ENSOARG00000002150	CRNKL1	87	85.970	Ovis_aries
ENSELUG00000015424	crnkl1	96	83.333	ENSPPAG00000027847	CRNKL1	81	84.408	Pan_paniscus
ENSELUG00000015424	crnkl1	97	85.007	ENSPPRG00000001955	CRNKL1	98	86.119	Panthera_pardus
ENSELUG00000015424	crnkl1	97	85.007	ENSPTIG00000007393	CRNKL1	98	86.119	Panthera_tigris_altaica
ENSELUG00000015424	crnkl1	97	84.357	ENSPTRG00000030609	CRNKL1	97	85.329	Pan_troglodytes
ENSELUG00000015424	crnkl1	97	84.503	ENSPANG00000017420	CRNKL1	97	85.479	Papio_anubis
ENSELUG00000015424	crnkl1	94	86.228	ENSPKIG00000017093	crnkl1	87	86.053	Paramormyrops_kingsleyae
ENSELUG00000015424	crnkl1	97	84.604	ENSPSIG00000012705	CRNKL1	97	85.886	Pelodiscus_sinensis
ENSELUG00000015424	crnkl1	97	83.016	ENSPMGG00000006263	crnkl1	94	84.108	Periophthalmus_magnuspinnatus
ENSELUG00000015424	crnkl1	98	83.890	ENSPEMG00000000073	-	97	85.479	Peromyscus_maniculatus_bairdii
ENSELUG00000015424	crnkl1	98	79.595	ENSPMAG00000002250	crnkl1	97	81.016	Petromyzon_marinus
ENSELUG00000015424	crnkl1	97	86.257	ENSPCIG00000025825	CRNKL1	93	87.575	Phascolarctos_cinereus
ENSELUG00000015424	crnkl1	95	88.823	ENSPFOG00000005102	crnkl1	90	89.205	Poecilia_formosa
ENSELUG00000015424	crnkl1	95	88.823	ENSPLAG00000007288	crnkl1	87	89.205	Poecilia_latipinna
ENSELUG00000015424	crnkl1	95	88.972	ENSPMEG00000008865	crnkl1	91	89.355	Poecilia_mexicana
ENSELUG00000015424	crnkl1	94	89.505	ENSPREG00000012615	crnkl1	90	89.505	Poecilia_reticulata
ENSELUG00000015424	crnkl1	96	84.389	ENSPPYG00000010747	CRNKL1	79	85.479	Pongo_abelii
ENSELUG00000015424	crnkl1	96	79.971	ENSPCAG00000003296	CRNKL1	83	81.437	Procavia_capensis
ENSELUG00000015424	crnkl1	97	84.311	ENSPCOG00000017608	CRNKL1	81	85.778	Propithecus_coquereli
ENSELUG00000015424	crnkl1	97	84.751	ENSPVAG00000006207	CRNKL1	81	85.970	Pteropus_vampyrus
ENSELUG00000015424	crnkl1	99	87.447	ENSPNYG00000001977	crnkl1	88	90.555	Pundamilia_nyererei
ENSELUG00000015424	crnkl1	95	91.356	ENSPNAG00000001507	crnkl1	96	88.823	Pygocentrus_nattereri
ENSELUG00000015424	crnkl1	97	83.918	ENSRNOG00000040045	Crnkl1	97	85.329	Rattus_norvegicus
ENSELUG00000015424	crnkl1	97	84.064	ENSRNOG00000010587	Crnkl1	97	85.479	Rattus_norvegicus
ENSELUG00000015424	crnkl1	97	84.357	ENSRBIG00000031770	CRNKL1	97	85.479	Rhinopithecus_bieti
ENSELUG00000015424	crnkl1	97	84.357	ENSRROG00000040450	CRNKL1	97	85.479	Rhinopithecus_roxellana
ENSELUG00000015424	crnkl1	92	37.101	YLR117C	CLF1	99	37.192	Saccharomyces_cerevisiae
ENSELUG00000015424	crnkl1	96	84.897	ENSSBOG00000029672	CRNKL1	97	85.629	Saimiri_boliviensis_boliviensis
ENSELUG00000015424	crnkl1	93	70.000	ENSSHAG00000011199	CRNKL1	99	69.954	Sarcophilus_harrisii
ENSELUG00000015424	crnkl1	94	90.196	ENSSFOG00015000946	crnkl1	87	89.985	Scleropages_formosus
ENSELUG00000015424	crnkl1	97	89.927	ENSSMAG00000007933	crnkl1	87	91.617	Scophthalmus_maximus
ENSELUG00000015424	crnkl1	96	84.071	ENSSDUG00000012625	crnkl1	86	84.799	Seriola_dumerili
ENSELUG00000015424	crnkl1	95	91.246	ENSSLDG00000021413	crnkl1	96	92.054	Seriola_lalandi_dorsalis
ENSELUG00000015424	crnkl1	97	84.134	ENSSARG00000006443	CRNKL1	80	85.224	Sorex_araneus
ENSELUG00000015424	crnkl1	97	84.649	ENSSPUG00000005254	CRNKL1	97	86.228	Sphenodon_punctatus
ENSELUG00000015424	crnkl1	95	92.090	ENSSPAG00000016150	crnkl1	86	92.354	Stegastes_partitus
ENSELUG00000015424	crnkl1	97	84.942	ENSSSCG00000038587	CRNKL1	96	86.377	Sus_scrofa
ENSELUG00000015424	crnkl1	97	84.425	ENSTGUG00000007645	CRNKL1	96	86.140	Taeniopygia_guttata
ENSELUG00000015424	crnkl1	95	84.352	ENSTRUG00000015417	crnkl1	89	84.558	Takifugu_rubripes
ENSELUG00000015424	crnkl1	95	87.892	ENSTNIG00000010710	crnkl1	97	87.892	Tetraodon_nigroviridis
ENSELUG00000015424	crnkl1	89	83.840	ENSTBEG00000001304	CRNKL1	82	83.968	Tupaia_belangeri
ENSELUG00000015424	crnkl1	89	82.720	ENSTTRG00000000484	CRNKL1	81	82.857	Tursiops_truncatus
ENSELUG00000015424	crnkl1	97	85.007	ENSUAMG00000018586	CRNKL1	98	86.119	Ursus_americanus
ENSELUG00000015424	crnkl1	97	85.007	ENSUMAG00000024957	CRNKL1	98	86.119	Ursus_maritimus
ENSELUG00000015424	crnkl1	96	84.831	ENSVVUG00000012559	CRNKL1	80	86.377	Vulpes_vulpes
ENSELUG00000015424	crnkl1	96	85.630	ENSXETG00000009698	crnkl1	97	86.567	Xenopus_tropicalis
ENSELUG00000015424	crnkl1	95	88.095	ENSXCOG00000000824	crnkl1	89	88.473	Xiphophorus_couchianus
ENSELUG00000015424	crnkl1	95	89.121	ENSXMAG00000006896	crnkl1	89	89.505	Xiphophorus_maculatus