EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSELUG00000015507 (Gene tree)
Gene ID
105026949
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
26650 bases
Position
chrLG12:16667121-16693770
Accession
105026949
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000015433CSDPF00313.221.5e-8415
ENSELUP00000015433CSDPF00313.221.5e-8425
ENSELUP00000015433CSDPF00313.221.5e-8435
ENSELUP00000015433CSDPF00313.221.5e-8445
ENSELUP00000015433CSDPF00313.221.5e-8455
ENSELUP00000015474CSDPF00313.221.7e-8415
ENSELUP00000015474CSDPF00313.221.7e-8425
ENSELUP00000015474CSDPF00313.221.7e-8435
ENSELUP00000015474CSDPF00313.221.7e-8445
ENSELUP00000015474CSDPF00313.221.7e-8455
ENSELUP00000015386CSDPF00313.223.8e-8415
ENSELUP00000015386CSDPF00313.223.8e-8425
ENSELUP00000015386CSDPF00313.223.8e-8435
ENSELUP00000015386CSDPF00313.223.8e-8445
ENSELUP00000015386CSDPF00313.223.8e-8455
ENSELUP00000015511CSDPF00313.224.7e-8315
ENSELUP00000015511CSDPF00313.224.7e-8325
ENSELUP00000015511CSDPF00313.224.7e-8335
ENSELUP00000015511CSDPF00313.224.7e-8345
ENSELUP00000015511CSDPF00313.224.7e-8355
ENSELUP00000015416CSDPF00313.226.1e-8315
ENSELUP00000015416CSDPF00313.226.1e-8325
ENSELUP00000015416CSDPF00313.226.1e-8335
ENSELUP00000015416CSDPF00313.226.1e-8345
ENSELUP00000015416CSDPF00313.226.1e-8355
ENSELUP00000015324CSDPF00313.221.8e-8215
ENSELUP00000015324CSDPF00313.221.8e-8225
ENSELUP00000015324CSDPF00313.221.8e-8235
ENSELUP00000015324CSDPF00313.221.8e-8245
ENSELUP00000015324CSDPF00313.221.8e-8255
ENSELUP00000015362CSDPF00313.224e-7314
ENSELUP00000015362CSDPF00313.224e-7324
ENSELUP00000015362CSDPF00313.224e-7334
ENSELUP00000015362CSDPF00313.224e-7344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000024504-4545XM_020051733ENSELUP00000015433867 (aa)XP_019907292-
ENSELUT00000024418-3444-ENSELUP00000015362882 (aa)--
ENSELUT00000024556-4557XM_010898794ENSELUP00000015474871 (aa)XP_010897096-
ENSELUT00000024441-3699-ENSELUP00000015386967 (aa)--
ENSELUT00000024479-3910XM_010898793ENSELUP00000015416942 (aa)XP_010897095-
ENSELUT00000024608-4791-ENSELUP00000015511891 (aa)--
ENSELUT00000024375-2292-ENSELUP00000015324763 (aa)--
Gene Model
Click here to download ENSELUG00000015507's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015507's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000015507csde110075.809ENSG00000009307CSDE110084.043Homo_sapiens
ENSELUG00000015507csde110089.564ENSAPOG00000015538csde110089.564Acanthochromis_polyacanthus
ENSELUG00000015507csde110075.162ENSAMEG00000017129CSDE19475.162Ailuropoda_melanoleuca
ENSELUG00000015507csde18786.022ENSACIG00000015175csde110086.022Amphilophus_citrinellus
ENSELUG00000015507csde110088.610ENSAOCG00000011510csde110088.800Amphiprion_ocellaris
ENSELUG00000015507csde110088.724ENSAPEG00000007194csde110089.346Amphiprion_percula
ENSELUG00000015507csde110086.917ENSATEG00000003864csde110086.917Anabas_testudineus
ENSELUG00000015507csde110077.102ENSAPLG00000008797CSDE110077.102Anas_platyrhynchos
ENSELUG00000015507csde110074.751ENSACAG00000003120CSDE110075.966Anolis_carolinensis
ENSELUG00000015507csde110075.679ENSANAG00000024665CSDE19477.397Aotus_nancymaae
ENSELUG00000015507csde18058.947ENSANAG00000028396-9162.245Aotus_nancymaae
ENSELUG00000015507csde110084.864ENSACLG00000013296csde110085.511Astatotilapia_calliptera
ENSELUG00000015507csde110085.881ENSAMXG00000007436csde110085.881Astyanax_mexicanus
ENSELUG00000015507csde110075.420ENSBTAG00000000678CSDE110075.420Bos_taurus
ENSELUG00000015507csde110075.679ENSCJAG00000012565CSDE19872.506Callithrix_jacchus
ENSELUG00000015507csde19876.354ENSCAFG00000009618CSDE19476.354Canis_familiaris
ENSELUG00000015507csde110076.197ENSCAFG00020000481CSDE110076.197Canis_lupus_dingo
ENSELUG00000015507csde110075.550ENSCHIG00000017250CSDE110075.550Capra_hircus
ENSELUG00000015507csde110075.938ENSTSYG00000003747CSDE110075.938Carlito_syrichta
ENSELUG00000015507csde19568.132ENSCAPG00000015128CSDE110068.132Cavia_aperea
ENSELUG00000015507csde110071.069ENSCPOG00000040388CSDE110071.069Cavia_porcellus
ENSELUG00000015507csde19554.846ENSCCAG00000033677-9954.846Cebus_capucinus
ENSELUG00000015507csde110075.679ENSCCAG00000036794CSDE110073.913Cebus_capucinus
ENSELUG00000015507csde19653.880ENSCCAG00000030878-9153.880Cebus_capucinus
ENSELUG00000015507csde110075.809ENSCATG00000036962CSDE19775.809Cercocebus_atys
ENSELUG00000015507csde110076.326ENSCLAG00000006618CSDE110076.326Chinchilla_lanigera
ENSELUG00000015507csde110072.886ENSCSAG00000001658CSDE19872.622Chlorocebus_sabaeus
ENSELUG00000015507csde19683.178ENSCHOG00000000918CSDE18980.000Choloepus_hoffmanni
ENSELUG00000015507csde110077.232ENSCPBG00000016547CSDE110077.232Chrysemys_picta_bellii
ENSELUG00000015507csde19841.425ENSCING00000014465-9841.686Ciona_intestinalis
ENSELUG00000015507csde19740.793ENSCSAVG00000008100-9941.294Ciona_savignyi
ENSELUG00000015507csde110075.809ENSCANG00000035096CSDE19775.809Colobus_angolensis_palliatus
ENSELUG00000015507csde18776.190ENSCANG00000031069-9379.026Colobus_angolensis_palliatus
ENSELUG00000015507csde110075.162ENSCGRG00001016833-10075.162Cricetulus_griseus_chok1gshd
ENSELUG00000015507csde110061.966ENSCGRG00001014011-10061.966Cricetulus_griseus_chok1gshd
ENSELUG00000015507csde19672.284ENSCGRG00000002225-10072.284Cricetulus_griseus_crigri
ENSELUG00000015507csde110071.552ENSCGRG00000005831-10071.552Cricetulus_griseus_crigri
ENSELUG00000015507csde110086.927ENSCSEG00000002620csde110086.927Cynoglossus_semilaevis
ENSELUG00000015507csde110085.899ENSCVAG00000001344csde110085.899Cyprinodon_variegatus
ENSELUG00000015507csde19687.395ENSDARG00000074758csde110089.928Danio_rerio
ENSELUG00000015507csde110075.969ENSDNOG00000010287-9375.969Dasypus_novemcinctus
ENSELUG00000015507csde16248.929ENSDNOG00000034464-9960.000Dasypus_novemcinctus
ENSELUG00000015507csde19973.887ENSDORG00000011609Csde110073.887Dipodomys_ordii
ENSELUG00000015507csde19747.465FBgn0263352Unr7945.957Drosophila_melanogaster
ENSELUG00000015507csde19280.488ENSETEG00000002491-7680.488Echinops_telfairi
ENSELUG00000015507csde19959.610ENSETEG00000013678-9959.610Echinops_telfairi
ENSELUG00000015507csde17853.377ENSETEG00000007109-9953.377Echinops_telfairi
ENSELUG00000015507csde19068.082ENSETEG00000006280-9968.082Echinops_telfairi
ENSELUG00000015507csde19952.826ENSEBUG00000008647csde19952.083Eptatretus_burgeri
ENSELUG00000015507csde110076.197ENSEASG00005006284CSDE110074.396Equus_asinus_asinus
ENSELUG00000015507csde110076.197ENSECAG00000020885CSDE19975.766Equus_caballus
ENSELUG00000015507csde19378.947ENSEEUG00000006286CSDE16878.947Erinaceus_europaeus
ENSELUG00000015507csde110076.067ENSFCAG00000029266CSDE110076.067Felis_catus
ENSELUG00000015507csde110073.756ENSFALG00000003407CSDE110075.000Ficedula_albicollis
ENSELUG00000015507csde19974.481ENSFDAG00000007882CSDE110074.481Fukomys_damarensis
ENSELUG00000015507csde19885.771ENSFHEG00000010799csde110084.988Fundulus_heteroclitus
ENSELUG00000015507csde19984.270ENSGMOG00000012731csde110086.788Gadus_morhua
ENSELUG00000015507csde19874.018ENSGALG00000002139CSDE19875.400Gallus_gallus
ENSELUG00000015507csde19484.370ENSGAFG00000005241csde19584.370Gambusia_affinis
ENSELUG00000015507csde19984.145ENSGACG00000004544csde110086.303Gasterosteus_aculeatus
ENSELUG00000015507csde110077.102ENSGAGG00000017685CSDE110075.483Gopherus_agassizii
ENSELUG00000015507csde110075.809ENSGGOG00000002164CSDE110075.809Gorilla_gorilla
ENSELUG00000015507csde110084.943ENSHBUG00000020315csde110085.885Haplochromis_burtoni
ENSELUG00000015507csde19958.728ENSHGLG00000000650-9960.169Heterocephalus_glaber_female
ENSELUG00000015507csde19966.798ENSHGLG00000007471-9866.798Heterocephalus_glaber_female
ENSELUG00000015507csde110068.952ENSHGLG00000009620-10069.211Heterocephalus_glaber_female
ENSELUG00000015507csde110068.889ENSHGLG00000003829-10068.889Heterocephalus_glaber_female
ENSELUG00000015507csde19665.188ENSHGLG00000010039-10065.188Heterocephalus_glaber_female
ENSELUG00000015507csde19666.024ENSHGLG00000008555-10066.024Heterocephalus_glaber_female
ENSELUG00000015507csde110061.905ENSHGLG00000019549-10062.198Heterocephalus_glaber_female
ENSELUG00000015507csde19664.967ENSHGLG00100006910-10064.967Heterocephalus_glaber_male
ENSELUG00000015507csde19966.711ENSHGLG00100007287-9866.711Heterocephalus_glaber_male
ENSELUG00000015507csde19364.315ENSHGLG00100004195-10064.315Heterocephalus_glaber_male
ENSELUG00000015507csde110061.966ENSHGLG00100001846-10061.966Heterocephalus_glaber_male
ENSELUG00000015507csde19760.310ENSHGLG00100004833-10060.310Heterocephalus_glaber_male
ENSELUG00000015507csde110064.575ENSHGLG00100012072-10064.575Heterocephalus_glaber_male
ENSELUG00000015507csde19961.988ENSHGLG00100002245-9963.329Heterocephalus_glaber_male
ENSELUG00000015507csde110075.809ENSHGLG00100019438-10075.809Heterocephalus_glaber_male
ENSELUG00000015507csde110085.640ENSHCOG00000004158csde110085.640Hippocampus_comes
ENSELUG00000015507csde110084.974ENSIPUG00000000355csde110084.974Ictalurus_punctatus
ENSELUG00000015507csde19064.549ENSSTOG00000032722-9864.549Ictidomys_tridecemlineatus
ENSELUG00000015507csde110062.817ENSSTOG00000030994-10062.817Ictidomys_tridecemlineatus
ENSELUG00000015507csde19974.332ENSJJAG00000019571Csde110074.332Jaculus_jaculus
ENSELUG00000015507csde110082.258ENSKMAG00000005685csde110084.838Kryptolebias_marmoratus
ENSELUG00000015507csde110088.991ENSLBEG00000014770csde110088.991Labrus_bergylta
ENSELUG00000015507csde110071.130ENSLACG00000018452CSDE19870.924Latimeria_chalumnae
ENSELUG00000015507csde110081.773ENSLOCG00000010413csde19584.077Lepisosteus_oculatus
ENSELUG00000015507csde110075.420ENSLAFG00000007150CSDE19675.420Loxodonta_africana
ENSELUG00000015507csde110075.809ENSMFAG00000003674CSDE110075.809Macaca_fascicularis
ENSELUG00000015507csde110075.809ENSMMUG00000001974CSDE110075.809Macaca_mulatta
ENSELUG00000015507csde110075.809ENSMNEG00000045247CSDE19775.809Macaca_nemestrina
ENSELUG00000015507csde110075.550ENSMLEG00000038673CSDE19872.390Mandrillus_leucophaeus
ENSELUG00000015507csde110090.023ENSMAMG00000008821csde110090.023Mastacembelus_armatus
ENSELUG00000015507csde110084.864ENSMZEG00005021675csde110085.511Maylandia_zebra
ENSELUG00000015507csde110077.132ENSMGAG00000016381CSDE110077.132Meleagris_gallopavo
ENSELUG00000015507csde19973.887ENSMAUG00000014031Csde110073.887Mesocricetus_auratus
ENSELUG00000015507csde110075.809ENSMICG00000002050CSDE19973.111Microcebus_murinus
ENSELUG00000015507csde110075.162ENSMOCG00000018960Csde110075.162Microtus_ochrogaster
ENSELUG00000015507csde110088.228ENSMMOG00000015075csde110088.228Mola_mola
ENSELUG00000015507csde110076.645ENSMODG00000004685CSDE110075.483Monodelphis_domestica
ENSELUG00000015507csde110087.451ENSMALG00000007132csde110087.451Monopterus_albus
ENSELUG00000015507csde110075.291MGP_CAROLIEiJ_G0025444Csde19290.196Mus_caroli
ENSELUG00000015507csde110075.291ENSMUSG00000068823Csde19982.550Mus_musculus
ENSELUG00000015507csde110075.291MGP_PahariEiJ_G0026888Csde19290.196Mus_pahari
ENSELUG00000015507csde110075.291MGP_SPRETEiJ_G0026394Csde19290.196Mus_spretus
ENSELUG00000015507csde19873.223ENSMPUG00000005753CSDE19974.384Mustela_putorius_furo
ENSELUG00000015507csde110075.809ENSMLUG00000005681CSDE19475.809Myotis_lucifugus
ENSELUG00000015507csde19651.885ENSNGAG00000012599-10051.885Nannospalax_galili
ENSELUG00000015507csde19973.887ENSNGAG00000021929Csde110073.887Nannospalax_galili
ENSELUG00000015507csde110084.864ENSNBRG00000020808csde110085.511Neolamprologus_brichardi
ENSELUG00000015507csde110075.679ENSNLEG00000004842CSDE19775.679Nomascus_leucogenys
ENSELUG00000015507csde19985.437ENSMEUG00000002677CSDE19585.437Notamacropus_eugenii
ENSELUG00000015507csde19983.495ENSOPRG00000005002CSDE17683.495Ochotona_princeps
ENSELUG00000015507csde19653.483ENSODEG00000005979-9853.483Octodon_degus
ENSELUG00000015507csde19974.481ENSODEG00000007383-10074.481Octodon_degus
ENSELUG00000015507csde19586.199ENSONIG00000009309csde110086.804Oreochromis_niloticus
ENSELUG00000015507csde110079.661ENSOANG00000003346-8379.661Ornithorhynchus_anatinus
ENSELUG00000015507csde110075.809ENSOCUG00000016438CSDE19872.558Oryctolagus_cuniculus
ENSELUG00000015507csde110085.382ENSORLG00000000707csde110086.441Oryzias_latipes
ENSELUG00000015507csde110084.677ENSORLG00020005148csde110086.320Oryzias_latipes_hni
ENSELUG00000015507csde110085.252ENSORLG00015019415csde110086.320Oryzias_latipes_hsok
ENSELUG00000015507csde110084.476ENSOMEG00000015656csde110086.441Oryzias_melastigma
ENSELUG00000015507csde110076.067ENSOGAG00000012127CSDE19476.067Otolemur_garnettii
ENSELUG00000015507csde110075.550ENSOARG00000020034CSDE19475.550Ovis_aries
ENSELUG00000015507csde110075.809ENSPPAG00000025861CSDE110075.809Pan_paniscus
ENSELUG00000015507csde110076.067ENSPPRG00000006747CSDE19872.854Panthera_pardus
ENSELUG00000015507csde110076.067ENSPTIG00000015468CSDE110074.275Panthera_tigris_altaica
ENSELUG00000015507csde110075.809ENSPTRG00000033721CSDE110074.034Pan_troglodytes
ENSELUG00000015507csde110075.809ENSPANG00000018873CSDE110075.809Papio_anubis
ENSELUG00000015507csde110084.845ENSPKIG00000009459csde110084.845Paramormyrops_kingsleyae
ENSELUG00000015507csde19675.328ENSPSIG00000003823CSDE19678.105Pelodiscus_sinensis
ENSELUG00000015507csde110083.592ENSPMGG00000000772csde110083.592Periophthalmus_magnuspinnatus
ENSELUG00000015507csde19974.184ENSPEMG00000020357-10074.184Peromyscus_maniculatus_bairdii
ENSELUG00000015507csde110074.502ENSPCIG00000022587CSDE110075.604Phascolarctos_cinereus
ENSELUG00000015507csde19784.448ENSPFOG00000012664csde110086.196Poecilia_formosa
ENSELUG00000015507csde19578.321ENSPLAG00000017680csde19380.303Poecilia_latipinna
ENSELUG00000015507csde19578.168ENSPMEG00000005094csde19580.152Poecilia_mexicana
ENSELUG00000015507csde110085.092ENSPREG00000011631csde110085.697Poecilia_reticulata
ENSELUG00000015507csde110072.761ENSPPYG00000000996CSDE110073.913Pongo_abelii
ENSELUG00000015507csde19984.466ENSPCAG00000014368CSDE18884.466Procavia_capensis
ENSELUG00000015507csde110076.067ENSPCOG00000017893CSDE110076.067Propithecus_coquereli
ENSELUG00000015507csde18768.015ENSPCOG00000008223-9169.630Propithecus_coquereli
ENSELUG00000015507csde110070.893ENSPVAG00000008225CSDE19570.893Pteropus_vampyrus
ENSELUG00000015507csde110084.864ENSPNYG00000013745csde110085.885Pundamilia_nyererei
ENSELUG00000015507csde110086.528ENSPNAG00000001958csde110086.528Pygocentrus_nattereri
ENSELUG00000015507csde110072.264ENSRNOG00000061058Csde110073.430Rattus_norvegicus
ENSELUG00000015507csde110071.189ENSRBIG00000038966-9868.097Rhinopithecus_bieti
ENSELUG00000015507csde110072.739ENSRBIG00000038088-10072.739Rhinopithecus_bieti
ENSELUG00000015507csde110075.809ENSRROG00000043101CSDE19775.809Rhinopithecus_roxellana
ENSELUG00000015507csde110075.679ENSSBOG00000035592CSDE19575.679Saimiri_boliviensis_boliviensis
ENSELUG00000015507csde110077.361ENSSHAG00000009831CSDE110077.361Sarcophilus_harrisii
ENSELUG00000015507csde110095.238ENSSFOG00015007498csde19195.238Scleropages_formosus
ENSELUG00000015507csde110087.840ENSSMAG00000007203csde110088.741Scophthalmus_maximus
ENSELUG00000015507csde110089.977ENSSDUG00000015380csde110089.977Seriola_dumerili
ENSELUG00000015507csde110088.486ENSSLDG00000008819csde110088.486Seriola_lalandi_dorsalis
ENSELUG00000015507csde110075.420ENSSARG00000000738CSDE19475.420Sorex_araneus
ENSELUG00000015507csde110077.361ENSSPUG00000008714CSDE110077.361Sphenodon_punctatus
ENSELUG00000015507csde110088.616ENSSPAG00000000716csde110088.616Stegastes_partitus
ENSELUG00000015507csde110076.197ENSSSCG00000006752CSDE110076.197Sus_scrofa
ENSELUG00000015507csde110073.573ENSTGUG00000000972CSDE110074.699Taeniopygia_guttata
ENSELUG00000015507csde110081.865ENSTRUG00000007996csde110081.865Takifugu_rubripes
ENSELUG00000015507csde18985.357ENSTNIG00000010878csde110085.357Tetraodon_nigroviridis
ENSELUG00000015507csde19377.500ENSTBEG00000011880-6577.500Tupaia_belangeri
ENSELUG00000015507csde110075.291ENSTTRG00000015583CSDE19475.291Tursiops_truncatus
ENSELUG00000015507csde19279.421ENSUAMG00000021779-9781.967Ursus_americanus
ENSELUG00000015507csde18771.451ENSUAMG00000024289-9971.451Ursus_americanus
ENSELUG00000015507csde19270.930ENSUMAG00000011714-9971.631Ursus_maritimus
ENSELUG00000015507csde19480.000ENSUMAG00000009720-9880.000Ursus_maritimus
ENSELUG00000015507csde110078.571ENSVPAG00000000749CSDE18374.648Vicugna_pacos
ENSELUG00000015507csde19371.449ENSVVUG00000009890CSDE19472.829Vulpes_vulpes
ENSELUG00000015507csde110074.969ENSXETG00000021448csde110076.053Xenopus_tropicalis
ENSELUG00000015507csde19488.121ENSXCOG00000000035csde19982.318Xiphophorus_couchianus
ENSELUG00000015507csde110085.206ENSXMAG00000009080csde110086.747Xiphophorus_maculatus

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