EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000015847 (Gene tree)
Gene ID: 105013289
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 20187 bases
Position: chrLG11:14371912-14392098
Accession: 105013289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000015926	IBN_N	PF03810.19	1.5e-10	1	1
ENSELUP00000015950	IBN_N	PF03810.19	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039550	-	2589	-	ENSELUP00000015926	862 (aa)	-	-
ENSELUT00000025165	-	5383	XM_010874712	ENSELUP00000015950	876 (aa)	XP_010873014	UPI0005765D54

Gene Model

Click here to download ENSELUG00000015847's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015847	kpnb1	100	92.808	ENSG00000108424	KPNB1	100	95.000	Homo_sapiens
ENSELUG00000015847	kpnb1	100	98.288	ENSAPOG00000020572	kpnb1	100	98.288	Acanthochromis_polyacanthus
ENSELUG00000015847	kpnb1	96	93.009	ENSAMEG00000004613	KPNB1	100	93.009	Ailuropoda_melanoleuca
ENSELUG00000015847	kpnb1	98	98.131	ENSACIG00000023130	kpnb1	99	98.131	Amphilophus_citrinellus
ENSELUG00000015847	kpnb1	100	98.288	ENSAOCG00000007048	kpnb1	100	98.288	Amphiprion_ocellaris
ENSELUG00000015847	kpnb1	100	98.288	ENSAPEG00000008270	kpnb1	100	98.288	Amphiprion_percula
ENSELUG00000015847	kpnb1	100	97.717	ENSATEG00000015139	kpnb1	100	97.717	Anabas_testudineus
ENSELUG00000015847	kpnb1	96	92.544	ENSAPLG00000010177	KPNB1	96	92.544	Anas_platyrhynchos
ENSELUG00000015847	kpnb1	100	93.265	ENSACAG00000007097	KPNB1	100	93.265	Anolis_carolinensis
ENSELUG00000015847	kpnb1	100	90.068	ENSANAG00000024932	-	99	90.068	Aotus_nancymaae
ENSELUG00000015847	kpnb1	100	97.945	ENSACLG00000015070	kpnb1	100	97.945	Astatotilapia_calliptera
ENSELUG00000015847	kpnb1	100	97.260	ENSAMXG00000041903	kpnb1	100	97.260	Astyanax_mexicanus
ENSELUG00000015847	kpnb1	100	93.151	ENSBTAG00000006586	KPNB1	100	93.151	Bos_taurus
ENSELUG00000015847	kpnb1	99	48.009	WBGene00002075	imb-1	98	48.009	Caenorhabditis_elegans
ENSELUG00000015847	kpnb1	100	92.922	ENSCJAG00000007834	KPNB1	100	92.922	Callithrix_jacchus
ENSELUG00000015847	kpnb1	100	93.151	ENSCAFG00000016678	KPNB1	100	93.151	Canis_familiaris
ENSELUG00000015847	kpnb1	100	93.151	ENSCAFG00020023205	KPNB1	100	93.151	Canis_lupus_dingo
ENSELUG00000015847	kpnb1	100	93.151	ENSCHIG00000014896	KPNB1	100	93.151	Capra_hircus
ENSELUG00000015847	kpnb1	100	91.210	ENSTSYG00000014472	KPNB1	99	91.210	Carlito_syrichta
ENSELUG00000015847	kpnb1	96	93.238	ENSCAPG00000014185	KPNB1	100	93.238	Cavia_aperea
ENSELUG00000015847	kpnb1	100	93.151	ENSCPOG00000006566	KPNB1	100	93.151	Cavia_porcellus
ENSELUG00000015847	kpnb1	100	86.168	ENSCCAG00000029263	-	99	86.168	Cebus_capucinus
ENSELUG00000015847	kpnb1	100	70.561	ENSCCAG00000018551	-	98	72.761	Cebus_capucinus
ENSELUG00000015847	kpnb1	100	92.808	ENSCATG00000037124	KPNB1	100	92.808	Cercocebus_atys
ENSELUG00000015847	kpnb1	100	93.037	ENSCLAG00000017091	KPNB1	100	93.037	Chinchilla_lanigera
ENSELUG00000015847	kpnb1	100	92.808	ENSCSAG00000002605	KPNB1	100	92.808	Chlorocebus_sabaeus
ENSELUG00000015847	kpnb1	73	84.906	ENSCHOG00000010604	KPNB1	73	84.906	Choloepus_hoffmanni
ENSELUG00000015847	kpnb1	99	93.627	ENSCPBG00000027423	KPNB1	94	93.627	Chrysemys_picta_bellii
ENSELUG00000015847	kpnb1	99	65.222	ENSCING00000004639	-	99	65.222	Ciona_intestinalis
ENSELUG00000015847	kpnb1	100	62.260	ENSCSAVG00000008624	-	100	62.260	Ciona_savignyi
ENSELUG00000015847	kpnb1	96	93.572	ENSCANG00000013489	KPNB1	100	93.572	Colobus_angolensis_palliatus
ENSELUG00000015847	kpnb1	100	93.037	ENSCGRG00001016042	Kpnb1	100	93.037	Cricetulus_griseus_chok1gshd
ENSELUG00000015847	kpnb1	96	93.120	ENSCGRG00000013910	Kpnb1	100	93.120	Cricetulus_griseus_crigri
ENSELUG00000015847	kpnb1	97	94.836	ENSCSEG00000007991	kpnb1	100	94.836	Cynoglossus_semilaevis
ENSELUG00000015847	kpnb1	100	96.575	ENSDARG00000104889	kpnb1	100	96.575	Danio_rerio
ENSELUG00000015847	kpnb1	99	62.329	FBgn0262743	Fs(2)Ket	99	62.329	Drosophila_melanogaster
ENSELUG00000015847	kpnb1	98	81.090	ENSEBUG00000013869	kpnb1	98	81.090	Eptatretus_burgeri
ENSELUG00000015847	kpnb1	100	93.151	ENSEASG00005000805	KPNB1	100	93.151	Equus_asinus_asinus
ENSELUG00000015847	kpnb1	100	93.151	ENSECAG00000014560	KPNB1	100	93.151	Equus_caballus
ENSELUG00000015847	kpnb1	87	91.960	ENSEEUG00000005046	KPNB1	88	91.960	Erinaceus_europaeus
ENSELUG00000015847	kpnb1	100	93.151	ENSFCAG00000023994	KPNB1	100	93.151	Felis_catus
ENSELUG00000015847	kpnb1	96	93.476	ENSFDAG00000019923	KPNB1	100	93.476	Fukomys_damarensis
ENSELUG00000015847	kpnb1	100	97.146	ENSFHEG00000020199	kpnb1	100	97.146	Fundulus_heteroclitus
ENSELUG00000015847	kpnb1	100	92.808	ENSGMOG00000011607	kpnb1	99	92.808	Gadus_morhua
ENSELUG00000015847	kpnb1	100	92.808	ENSGALG00000036962	KPNB1	100	92.808	Gallus_gallus
ENSELUG00000015847	kpnb1	100	97.146	ENSGAFG00000000783	kpnb1	100	97.146	Gambusia_affinis
ENSELUG00000015847	kpnb1	100	93.220	ENSGACG00000014765	kpnb1	100	93.220	Gasterosteus_aculeatus
ENSELUG00000015847	kpnb1	96	93.103	ENSGAGG00000023737	KPNB1	92	93.103	Gopherus_agassizii
ENSELUG00000015847	kpnb1	100	92.808	ENSGGOG00000008089	KPNB1	100	92.808	Gorilla_gorilla
ENSELUG00000015847	kpnb1	100	97.945	ENSHBUG00000016826	kpnb1	100	97.945	Haplochromis_burtoni
ENSELUG00000015847	kpnb1	100	93.379	ENSHGLG00000014138	KPNB1	100	93.379	Heterocephalus_glaber_female
ENSELUG00000015847	kpnb1	96	93.476	ENSHGLG00100006572	KPNB1	100	93.476	Heterocephalus_glaber_male
ENSELUG00000015847	kpnb1	100	94.863	ENSHCOG00000002084	kpnb1	100	94.863	Hippocampus_comes
ENSELUG00000015847	kpnb1	99	92.584	ENSIPUG00000012402	kpnb1	95	92.584	Ictalurus_punctatus
ENSELUG00000015847	kpnb1	100	93.151	ENSSTOG00000007896	KPNB1	100	93.151	Ictidomys_tridecemlineatus
ENSELUG00000015847	kpnb1	100	92.808	ENSJJAG00000010909	Kpnb1	100	92.808	Jaculus_jaculus
ENSELUG00000015847	kpnb1	100	96.575	ENSKMAG00000001547	kpnb1	100	96.575	Kryptolebias_marmoratus
ENSELUG00000015847	kpnb1	99	97.463	ENSLBEG00000025794	kpnb1	99	95.556	Labrus_bergylta
ENSELUG00000015847	kpnb1	88	92.737	ENSLACG00000017620	KPNB1	99	92.737	Latimeria_chalumnae
ENSELUG00000015847	kpnb1	100	97.260	ENSLOCG00000013753	kpnb1	100	97.260	Lepisosteus_oculatus
ENSELUG00000015847	kpnb1	100	88.128	ENSLAFG00000001328	KPNB1	100	88.128	Loxodonta_africana
ENSELUG00000015847	kpnb1	99	90.378	ENSMFAG00000030197	KPNB1	100	92.883	Macaca_fascicularis
ENSELUG00000015847	kpnb1	99	91.314	ENSMMUG00000019760	KPNB1	99	91.314	Macaca_mulatta
ENSELUG00000015847	kpnb1	100	92.808	ENSMNEG00000040927	KPNB1	100	92.808	Macaca_nemestrina
ENSELUG00000015847	kpnb1	100	90.411	ENSMLEG00000038185	KPNB1	99	90.411	Mandrillus_leucophaeus
ENSELUG00000015847	kpnb1	100	98.402	ENSMAMG00000011036	kpnb1	100	98.402	Mastacembelus_armatus
ENSELUG00000015847	kpnb1	100	97.945	ENSMZEG00005004564	kpnb1	100	97.945	Maylandia_zebra
ENSELUG00000015847	kpnb1	55	92.340	ENSMGAG00000002770	-	100	92.340	Meleagris_gallopavo
ENSELUG00000015847	kpnb1	100	93.037	ENSMAUG00000006211	Kpnb1	100	93.037	Mesocricetus_auratus
ENSELUG00000015847	kpnb1	100	93.151	ENSMICG00000012059	KPNB1	84	93.151	Microcebus_murinus
ENSELUG00000015847	kpnb1	100	93.037	ENSMOCG00000003683	Kpnb1	100	93.037	Microtus_ochrogaster
ENSELUG00000015847	kpnb1	100	93.607	ENSMODG00000012505	KPNB1	100	93.607	Monodelphis_domestica
ENSELUG00000015847	kpnb1	100	98.402	ENSMALG00000000863	kpnb1	100	98.402	Monopterus_albus
ENSELUG00000015847	kpnb1	94	93.552	MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	Mus_caroli
ENSELUG00000015847	kpnb1	100	93.037	ENSMUSG00000001440	Kpnb1	100	93.037	Mus_musculus
ENSELUG00000015847	kpnb1	100	92.132	ENSMPUG00000015220	KPNB1	100	92.132	Mustela_putorius_furo
ENSELUG00000015847	kpnb1	100	88.155	ENSMLUG00000014522	KPNB1	100	88.155	Myotis_lucifugus
ENSELUG00000015847	kpnb1	96	93.120	ENSNGAG00000017610	Kpnb1	100	93.120	Nannospalax_galili
ENSELUG00000015847	kpnb1	100	97.945	ENSNBRG00000019305	kpnb1	100	97.945	Neolamprologus_brichardi
ENSELUG00000015847	kpnb1	100	92.808	ENSNLEG00000001446	KPNB1	100	92.808	Nomascus_leucogenys
ENSELUG00000015847	kpnb1	100	88.014	ENSMEUG00000014284	KPNB1	100	88.014	Notamacropus_eugenii
ENSELUG00000015847	kpnb1	100	93.037	ENSODEG00000017287	KPNB1	100	93.037	Octodon_degus
ENSELUG00000015847	kpnb1	100	98.059	ENSONIG00000009269	kpnb1	100	98.059	Oreochromis_niloticus
ENSELUG00000015847	kpnb1	100	93.151	ENSOCUG00000015425	KPNB1	100	93.151	Oryctolagus_cuniculus
ENSELUG00000015847	kpnb1	100	97.489	ENSORLG00000019936	kpnb1	100	97.489	Oryzias_latipes
ENSELUG00000015847	kpnb1	100	97.489	ENSORLG00020021181	kpnb1	100	97.489	Oryzias_latipes_hni
ENSELUG00000015847	kpnb1	100	97.374	ENSORLG00015012177	kpnb1	100	97.374	Oryzias_latipes_hsok
ENSELUG00000015847	kpnb1	100	97.603	ENSOMEG00000021022	kpnb1	100	97.603	Oryzias_melastigma
ENSELUG00000015847	kpnb1	100	93.037	ENSOGAG00000006153	KPNB1	100	93.037	Otolemur_garnettii
ENSELUG00000015847	kpnb1	97	92.389	ENSOARG00000008469	KPNB1	99	92.389	Ovis_aries
ENSELUG00000015847	kpnb1	100	92.808	ENSPPAG00000028842	KPNB1	100	92.808	Pan_paniscus
ENSELUG00000015847	kpnb1	97	92.916	ENSPPRG00000022879	KPNB1	97	92.916	Panthera_pardus
ENSELUG00000015847	kpnb1	97	92.916	ENSPTIG00000006870	KPNB1	97	92.916	Panthera_tigris_altaica
ENSELUG00000015847	kpnb1	100	92.808	ENSPTRG00000009333	KPNB1	100	92.808	Pan_troglodytes
ENSELUG00000015847	kpnb1	100	92.808	ENSPANG00000022099	KPNB1	100	92.808	Papio_anubis
ENSELUG00000015847	kpnb1	100	96.575	ENSPKIG00000017563	kpnb1	100	96.575	Paramormyrops_kingsleyae
ENSELUG00000015847	kpnb1	96	93.713	ENSPSIG00000009775	KPNB1	100	93.713	Pelodiscus_sinensis
ENSELUG00000015847	kpnb1	100	90.536	ENSPMGG00000001041	kpnb1	93	90.536	Periophthalmus_magnuspinnatus
ENSELUG00000015847	kpnb1	100	93.037	ENSPEMG00000017783	Kpnb1	100	93.037	Peromyscus_maniculatus_bairdii
ENSELUG00000015847	kpnb1	99	84.738	ENSPMAG00000007117	kpnb1	99	84.738	Petromyzon_marinus
ENSELUG00000015847	kpnb1	100	93.607	ENSPCIG00000001034	KPNB1	100	93.607	Phascolarctos_cinereus
ENSELUG00000015847	kpnb1	100	97.146	ENSPFOG00000009014	kpnb1	100	97.146	Poecilia_formosa
ENSELUG00000015847	kpnb1	100	97.146	ENSPLAG00000010922	kpnb1	100	97.146	Poecilia_latipinna
ENSELUG00000015847	kpnb1	100	97.146	ENSPREG00000012268	kpnb1	100	97.146	Poecilia_reticulata
ENSELUG00000015847	kpnb1	100	92.352	ENSPPYG00000025935	KPNB1	100	92.352	Pongo_abelii
ENSELUG00000015847	kpnb1	75	77.667	ENSPCAG00000002526	KPNB1	78	77.667	Procavia_capensis
ENSELUG00000015847	kpnb1	100	93.151	ENSPCOG00000026259	KPNB1	100	93.151	Propithecus_coquereli
ENSELUG00000015847	kpnb1	100	92.694	ENSPVAG00000004910	KPNB1	100	92.694	Pteropus_vampyrus
ENSELUG00000015847	kpnb1	100	93.559	ENSPNYG00000017703	kpnb1	96	97.704	Pundamilia_nyererei
ENSELUG00000015847	kpnb1	99	89.080	ENSPNAG00000024047	kpnb1	98	89.080	Pygocentrus_nattereri
ENSELUG00000015847	kpnb1	100	93.037	ENSRNOG00000009275	Kpnb1	100	93.037	Rattus_norvegicus
ENSELUG00000015847	kpnb1	100	92.694	ENSRBIG00000002254	KPNB1	99	92.694	Rhinopithecus_bieti
ENSELUG00000015847	kpnb1	99	92.263	ENSRROG00000030419	KPNB1	99	92.263	Rhinopithecus_roxellana
ENSELUG00000015847	kpnb1	99	34.130	YLR347C	KAP95	99	34.130	Saccharomyces_cerevisiae
ENSELUG00000015847	kpnb1	100	92.808	ENSSBOG00000030025	KPNB1	94	92.808	Saimiri_boliviensis_boliviensis
ENSELUG00000015847	kpnb1	96	93.388	ENSSHAG00000018214	KPNB1	100	93.388	Sarcophilus_harrisii
ENSELUG00000015847	kpnb1	100	97.603	ENSSFOG00015020000	kpnb1	100	97.603	Scleropages_formosus
ENSELUG00000015847	kpnb1	100	98.516	ENSSDUG00000016218	kpnb1	100	98.516	Seriola_dumerili
ENSELUG00000015847	kpnb1	98	98.485	ENSSLDG00000021549	kpnb1	97	98.485	Seriola_lalandi_dorsalis
ENSELUG00000015847	kpnb1	100	93.037	ENSSPUG00000017799	KPNB1	100	93.037	Sphenodon_punctatus
ENSELUG00000015847	kpnb1	100	98.288	ENSSPAG00000019346	kpnb1	100	98.288	Stegastes_partitus
ENSELUG00000015847	kpnb1	100	93.151	ENSSSCG00000017514	KPNB1	100	93.151	Sus_scrofa
ENSELUG00000015847	kpnb1	96	88.256	ENSTGUG00000003387	KPNB1	100	88.256	Taeniopygia_guttata
ENSELUG00000015847	kpnb1	100	94.977	ENSTRUG00000000542	kpnb1	100	94.977	Takifugu_rubripes
ENSELUG00000015847	kpnb1	100	95.548	ENSTNIG00000006494	kpnb1	100	95.548	Tetraodon_nigroviridis
ENSELUG00000015847	kpnb1	96	93.357	ENSTTRG00000004682	KPNB1	100	93.357	Tursiops_truncatus
ENSELUG00000015847	kpnb1	100	93.151	ENSUAMG00000025344	KPNB1	99	93.151	Ursus_americanus
ENSELUG00000015847	kpnb1	98	91.977	ENSUMAG00000016471	KPNB1	98	91.977	Ursus_maritimus
ENSELUG00000015847	kpnb1	100	79.452	ENSVPAG00000003675	KPNB1	100	79.452	Vicugna_pacos
ENSELUG00000015847	kpnb1	100	93.151	ENSVVUG00000003085	KPNB1	100	93.151	Vulpes_vulpes
ENSELUG00000015847	kpnb1	100	91.895	ENSXETG00000014717	kpnb1	100	91.895	Xenopus_tropicalis
ENSELUG00000015847	kpnb1	100	97.032	ENSXMAG00000018792	kpnb1	100	97.032	Xiphophorus_maculatus