EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000015969 (Gene tree)
Gene ID: 105030591
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 86962 bases
Position: chrAZJR03000946.1:31711-118672
Accession: 105030591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036536	R3H	PF01424.22	7.4e-11	1	1
ENSELUP00000036585	R3H	PF01424.22	8.9e-11	1	1
ENSELUP00000016037	R3H	PF01424.22	9.1e-11	1	1
ENSELUP00000036569	R3H	PF01424.22	9.1e-11	1	1
ENSELUP00000036599	R3H	PF01424.22	9.1e-11	1	1
ENSELUP00000016067	R3H	PF01424.22	9.7e-11	1	1
ENSELUP00000016113	R3H	PF01424.22	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025351	-	5324	XM_010904539	ENSELUP00000016067	1097 (aa)	XP_010902841	UPI0005769EDA
ENSELUT00000039607	-	5906	-	ENSELUP00000036569	1012 (aa)	-	-
ENSELUT00000039612	-	5864	-	ENSELUP00000016037	998 (aa)	-	-
ENSELUT00000025339	-	6339	-	ENSELUP00000036599	1012 (aa)	-	-
ENSELUT00000039619	-	6246	-	ENSELUP00000036585	981 (aa)	-	-
ENSELUT00000025236	-	2523	-	ENSELUP00000036536	840 (aa)	-	-
ENSELUT00000025368	-	5033	XM_013132922	ENSELUP00000016113	1079 (aa)	XP_012988376	UPI0005771024

Gene Model

Click here to download ENSELUG00000015969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000015969	r3hdm2	94	59.756	ENSELUG00000004909	R3HDM1	74	64.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015969	r3hdm2	100	64.319	ENSG00000179912	R3HDM2	91	70.383	Homo_sapiens
ENSELUG00000015969	r3hdm2	100	80.161	ENSAPOG00000020341	r3hdm2	100	81.144	Acanthochromis_polyacanthus
ENSELUG00000015969	r3hdm2	53	38.172	ENSAPOG00000021873	-	50	48.943	Acanthochromis_polyacanthus
ENSELUG00000015969	r3hdm2	94	65.333	ENSAMEG00000004812	R3HDM2	96	64.579	Ailuropoda_melanoleuca
ENSELUG00000015969	r3hdm2	100	78.753	ENSACIG00000016146	r3hdm2	98	74.926	Amphilophus_citrinellus
ENSELUG00000015969	r3hdm2	100	80.250	ENSAOCG00000023694	r3hdm2	100	81.591	Amphiprion_ocellaris
ENSELUG00000015969	r3hdm2	100	80.018	ENSAPEG00000008851	r3hdm2	99	83.205	Amphiprion_percula
ENSELUG00000015969	r3hdm2	100	77.657	ENSATEG00000025024	r3hdm2	100	80.887	Anabas_testudineus
ENSELUG00000015969	r3hdm2	95	64.706	ENSAPLG00000004298	R3HDM2	85	76.364	Anas_platyrhynchos
ENSELUG00000015969	r3hdm2	100	59.115	ENSACAG00000006388	R3HDM2	96	60.395	Anolis_carolinensis
ENSELUG00000015969	r3hdm2	100	63.805	ENSANAG00000025397	-	95	63.663	Aotus_nancymaae
ENSELUG00000015969	r3hdm2	100	59.618	ENSANAG00000031310	-	98	59.865	Aotus_nancymaae
ENSELUG00000015969	r3hdm2	100	79.857	ENSACLG00000019106	r3hdm2	100	80.215	Astatotilapia_calliptera
ENSELUG00000015969	r3hdm2	100	66.249	ENSAMXG00000017180	r3hdm2	100	66.317	Astyanax_mexicanus
ENSELUG00000015969	r3hdm2	100	61.186	ENSBTAG00000018361	R3HDM2	96	63.259	Bos_taurus
ENSELUG00000015969	r3hdm2	100	64.236	ENSCJAG00000007365	R3HDM2	95	63.840	Callithrix_jacchus
ENSELUG00000015969	r3hdm2	100	61.290	ENSCAFG00000000215	R3HDM2	96	63.254	Canis_familiaris
ENSELUG00000015969	r3hdm2	100	64.186	ENSCAFG00020023713	R3HDM2	96	64.911	Canis_lupus_dingo
ENSELUG00000015969	r3hdm2	100	62.698	ENSCHIG00000014022	R3HDM2	96	65.057	Capra_hircus
ENSELUG00000015969	r3hdm2	100	63.249	ENSTSYG00000001449	R3HDM2	98	60.817	Carlito_syrichta
ENSELUG00000015969	r3hdm2	100	62.388	ENSCPOG00000009217	R3HDM2	96	65.658	Cavia_porcellus
ENSELUG00000015969	r3hdm2	88	66.553	ENSCCAG00000026083	R3HDM2	95	66.210	Cebus_capucinus
ENSELUG00000015969	r3hdm2	100	64.088	ENSCATG00000036929	R3HDM2	96	64.611	Cercocebus_atys
ENSELUG00000015969	r3hdm2	100	61.136	ENSCLAG00000011997	R3HDM2	96	65.160	Chinchilla_lanigera
ENSELUG00000015969	r3hdm2	95	65.188	ENSCSAG00000004911	R3HDM2	96	65.000	Chlorocebus_sabaeus
ENSELUG00000015969	r3hdm2	70	69.330	ENSCHOG00000005636	R3HDM2	84	70.460	Choloepus_hoffmanni
ENSELUG00000015969	r3hdm2	100	60.171	ENSCPBG00000013922	R3HDM2	98	62.186	Chrysemys_picta_bellii
ENSELUG00000015969	r3hdm2	100	64.236	ENSCANG00000043807	R3HDM2	96	64.924	Colobus_angolensis_palliatus
ENSELUG00000015969	r3hdm2	98	62.591	ENSCGRG00001017324	R3hdm2	98	62.273	Cricetulus_griseus_chok1gshd
ENSELUG00000015969	r3hdm2	100	61.067	ENSCGRG00000003862	R3hdm2	98	62.273	Cricetulus_griseus_crigri
ENSELUG00000015969	r3hdm2	100	78.891	ENSCSEG00000010925	r3hdm2	100	79.338	Cynoglossus_semilaevis
ENSELUG00000015969	r3hdm2	100	76.455	ENSCVAG00000009058	r3hdm2	100	77.440	Cyprinodon_variegatus
ENSELUG00000015969	r3hdm2	100	66.592	ENSDARG00000102610	r3hdm2	99	69.804	Danio_rerio
ENSELUG00000015969	r3hdm2	98	63.192	ENSDNOG00000015033	R3HDM2	100	64.095	Dasypus_novemcinctus
ENSELUG00000015969	r3hdm2	100	62.812	ENSDORG00000011462	R3hdm2	99	60.924	Dipodomys_ordii
ENSELUG00000015969	r3hdm2	100	61.315	ENSEASG00005007091	R3HDM2	96	65.250	Equus_asinus_asinus
ENSELUG00000015969	r3hdm2	100	61.830	ENSECAG00000003157	R3HDM2	96	65.687	Equus_caballus
ENSELUG00000015969	r3hdm2	100	63.426	ENSFCAG00000000192	R3HDM2	95	65.029	Felis_catus
ENSELUG00000015969	r3hdm2	86	61.513	ENSFALG00000000255	R3HDM2	98	59.658	Ficedula_albicollis
ENSELUG00000015969	r3hdm2	100	60.177	ENSFDAG00000019385	R3HDM2	96	64.944	Fukomys_damarensis
ENSELUG00000015969	r3hdm2	100	76.723	ENSFHEG00000016484	r3hdm2	100	77.569	Fundulus_heteroclitus
ENSELUG00000015969	r3hdm2	94	77.395	ENSGMOG00000007961	r3hdm2	100	77.011	Gadus_morhua
ENSELUG00000015969	r3hdm2	100	59.403	ENSGALG00000043736	R3HDM2	96	62.618	Gallus_gallus
ENSELUG00000015969	r3hdm2	100	79.008	ENSGAFG00000013887	r3hdm2	100	78.834	Gambusia_affinis
ENSELUG00000015969	r3hdm2	94	80.383	ENSGACG00000006442	r3hdm2	100	81.340	Gasterosteus_aculeatus
ENSELUG00000015969	r3hdm2	100	60.195	ENSGAGG00000017797	R3HDM2	97	61.828	Gopherus_agassizii
ENSELUG00000015969	r3hdm2	100	64.319	ENSGGOG00000015007	R3HDM2	96	64.706	Gorilla_gorilla
ENSELUG00000015969	r3hdm2	100	62.401	ENSHGLG00000010434	-	98	63.927	Heterocephalus_glaber_female
ENSELUG00000015969	r3hdm2	99	58.266	ENSHGLG00000010421	-	97	55.930	Heterocephalus_glaber_female
ENSELUG00000015969	r3hdm2	100	61.093	ENSHGLG00100004183	-	98	63.836	Heterocephalus_glaber_male
ENSELUG00000015969	r3hdm2	97	56.028	ENSHGLG00100018871	-	96	55.909	Heterocephalus_glaber_male
ENSELUG00000015969	r3hdm2	100	76.147	ENSHCOG00000001142	r3hdm2	97	77.085	Hippocampus_comes
ENSELUG00000015969	r3hdm2	97	73.352	ENSIPUG00000023873	r3hdm2	98	73.840	Ictalurus_punctatus
ENSELUG00000015969	r3hdm2	100	61.320	ENSSTOG00000013424	R3HDM2	96	59.462	Ictidomys_tridecemlineatus
ENSELUG00000015969	r3hdm2	98	64.507	ENSJJAG00000010001	R3hdm2	98	62.943	Jaculus_jaculus
ENSELUG00000015969	r3hdm2	100	78.980	ENSKMAG00000012695	r3hdm2	97	79.070	Kryptolebias_marmoratus
ENSELUG00000015969	r3hdm2	100	78.571	ENSLBEG00000013115	r3hdm2	96	79.230	Labrus_bergylta
ENSELUG00000015969	r3hdm2	94	65.613	ENSLACG00000019064	r3hdm2	100	62.631	Latimeria_chalumnae
ENSELUG00000015969	r3hdm2	100	70.444	ENSLOCG00000005976	r3hdm2	96	72.275	Lepisosteus_oculatus
ENSELUG00000015969	r3hdm2	98	63.653	ENSLAFG00000006510	R3HDM2	98	63.479	Loxodonta_africana
ENSELUG00000015969	r3hdm2	100	63.657	ENSMFAG00000036385	R3HDM2	96	64.645	Macaca_fascicularis
ENSELUG00000015969	r3hdm2	100	63.657	ENSMMUG00000021789	R3HDM2	96	65.403	Macaca_mulatta
ENSELUG00000015969	r3hdm2	100	63.699	ENSMNEG00000025314	R3HDM2	96	64.583	Macaca_nemestrina
ENSELUG00000015969	r3hdm2	100	64.319	ENSMLEG00000028915	R3HDM2	96	64.706	Mandrillus_leucophaeus
ENSELUG00000015969	r3hdm2	100	79.464	ENSMAMG00000009793	r3hdm2	100	80.804	Mastacembelus_armatus
ENSELUG00000015969	r3hdm2	100	79.857	ENSMZEG00005007319	r3hdm2	100	80.215	Maylandia_zebra
ENSELUG00000015969	r3hdm2	100	63.134	ENSMICG00000012389	R3HDM2	96	62.416	Microcebus_murinus
ENSELUG00000015969	r3hdm2	98	62.706	ENSMOCG00000014425	R3hdm2	98	62.261	Microtus_ochrogaster
ENSELUG00000015969	r3hdm2	100	76.504	ENSMMOG00000007448	r3hdm2	99	74.519	Mola_mola
ENSELUG00000015969	r3hdm2	100	74.383	ENSMALG00000010211	r3hdm2	98	82.849	Monopterus_albus
ENSELUG00000015969	r3hdm2	100	61.894	MGP_CAROLIEiJ_G0015896	R3hdm2	98	62.966	Mus_caroli
ENSELUG00000015969	r3hdm2	98	64.572	ENSMUSG00000025404	R3hdm2	98	63.115	Mus_musculus
ENSELUG00000015969	r3hdm2	100	60.512	MGP_PahariEiJ_G0031189	R3hdm2	98	63.470	Mus_pahari
ENSELUG00000015969	r3hdm2	98	64.455	MGP_SPRETEiJ_G0016722	R3hdm2	98	63.000	Mus_spretus
ENSELUG00000015969	r3hdm2	93	64.826	ENSMPUG00000001818	R3HDM2	95	63.442	Mustela_putorius_furo
ENSELUG00000015969	r3hdm2	95	65.465	ENSMLUG00000004980	R3HDM2	96	64.589	Myotis_lucifugus
ENSELUG00000015969	r3hdm2	98	64.168	ENSNGAG00000018800	R3hdm2	95	65.521	Nannospalax_galili
ENSELUG00000015969	r3hdm2	100	79.561	ENSNBRG00000004483	r3hdm2	99	76.158	Neolamprologus_brichardi
ENSELUG00000015969	r3hdm2	100	63.805	ENSNLEG00000017351	R3HDM2	96	65.052	Nomascus_leucogenys
ENSELUG00000015969	r3hdm2	98	55.880	ENSMEUG00000008588	R3HDM2	96	55.849	Notamacropus_eugenii
ENSELUG00000015969	r3hdm2	100	58.465	ENSOPRG00000013670	R3HDM2	98	55.261	Ochotona_princeps
ENSELUG00000015969	r3hdm2	100	77.206	ENSONIG00000005075	r3hdm2	100	77.206	Oreochromis_niloticus
ENSELUG00000015969	r3hdm2	98	63.752	ENSOCUG00000013258	R3HDM2	98	63.612	Oryctolagus_cuniculus
ENSELUG00000015969	r3hdm2	100	78.853	ENSORLG00000005502	r3hdm2	100	78.584	Oryzias_latipes
ENSELUG00000015969	r3hdm2	100	78.584	ENSORLG00020017069	r3hdm2	100	78.315	Oryzias_latipes_hni
ENSELUG00000015969	r3hdm2	100	78.674	ENSORLG00015012735	r3hdm2	100	78.405	Oryzias_latipes_hsok
ENSELUG00000015969	r3hdm2	100	77.560	ENSOMEG00000018079	r3hdm2	99	71.140	Oryzias_melastigma
ENSELUG00000015969	r3hdm2	100	60.151	ENSOGAG00000012055	R3HDM2	96	62.394	Otolemur_garnettii
ENSELUG00000015969	r3hdm2	95	56.198	ENSOGAG00000027966	-	90	58.761	Otolemur_garnettii
ENSELUG00000015969	r3hdm2	100	61.624	ENSOARG00000006929	R3HDM2	96	63.138	Ovis_aries
ENSELUG00000015969	r3hdm2	100	64.434	ENSPPAG00000034395	R3HDM2	96	64.801	Pan_paniscus
ENSELUG00000015969	r3hdm2	100	63.426	ENSPPRG00000009240	R3HDM2	96	63.244	Panthera_pardus
ENSELUG00000015969	r3hdm2	100	63.426	ENSPTIG00000008752	R3HDM2	96	63.244	Panthera_tigris_altaica
ENSELUG00000015969	r3hdm2	100	63.773	ENSPTRG00000046457	R3HDM2	96	64.739	Pan_troglodytes
ENSELUG00000015969	r3hdm2	100	64.319	ENSPANG00000024002	R3HDM2	98	62.874	Papio_anubis
ENSELUG00000015969	r3hdm2	100	75.116	ENSPKIG00000003171	r3hdm2	99	74.771	Paramormyrops_kingsleyae
ENSELUG00000015969	r3hdm2	66	56.353	ENSPSIG00000006954	R3HDM2	97	54.940	Pelodiscus_sinensis
ENSELUG00000015969	r3hdm2	100	76.825	ENSPMGG00000007061	r3hdm2	99	77.061	Periophthalmus_magnuspinnatus
ENSELUG00000015969	r3hdm2	98	62.842	ENSPEMG00000015964	R3hdm2	98	62.831	Peromyscus_maniculatus_bairdii
ENSELUG00000015969	r3hdm2	100	63.176	ENSPCIG00000023841	R3HDM2	100	59.226	Phascolarctos_cinereus
ENSELUG00000015969	r3hdm2	54	37.625	ENSPFOG00000008096	-	59	43.367	Poecilia_formosa
ENSELUG00000015969	r3hdm2	97	76.355	ENSPFOG00000006077	r3hdm2	81	86.592	Poecilia_formosa
ENSELUG00000015969	r3hdm2	54	36.581	ENSPLAG00000006973	-	59	43.112	Poecilia_latipinna
ENSELUG00000015969	r3hdm2	100	77.880	ENSPLAG00000002971	r3hdm2	100	78.617	Poecilia_latipinna
ENSELUG00000015969	r3hdm2	54	36.741	ENSPMEG00000014457	-	59	43.367	Poecilia_mexicana
ENSELUG00000015969	r3hdm2	100	77.880	ENSPMEG00000005330	r3hdm2	100	78.617	Poecilia_mexicana
ENSELUG00000015969	r3hdm2	100	77.261	ENSPREG00000008424	r3hdm2	100	78.344	Poecilia_reticulata
ENSELUG00000015969	r3hdm2	97	59.419	ENSPPYG00000004685	R3HDM2	77	57.670	Pongo_abelii
ENSELUG00000015969	r3hdm2	88	87.591	ENSPCAG00000014642	R3HDM2	89	82.500	Procavia_capensis
ENSELUG00000015969	r3hdm2	100	63.542	ENSPCOG00000013201	R3HDM2	96	62.849	Propithecus_coquereli
ENSELUG00000015969	r3hdm2	95	65.779	ENSPVAG00000003967	R3HDM2	96	65.184	Pteropus_vampyrus
ENSELUG00000015969	r3hdm2	100	71.143	ENSPNYG00000013479	r3hdm2	100	75.713	Pundamilia_nyererei
ENSELUG00000015969	r3hdm2	100	72.848	ENSPNAG00000017473	r3hdm2	100	74.025	Pygocentrus_nattereri
ENSELUG00000015969	r3hdm2	100	60.356	ENSRNOG00000007801	R3hdm2	98	62.420	Rattus_norvegicus
ENSELUG00000015969	r3hdm2	100	60.229	ENSRBIG00000037403	R3HDM2	95	61.434	Rhinopithecus_bieti
ENSELUG00000015969	r3hdm2	100	63.805	ENSRROG00000022271	R3HDM2	96	65.052	Rhinopithecus_roxellana
ENSELUG00000015969	r3hdm2	100	64.352	ENSSBOG00000023547	R3HDM2	95	63.628	Saimiri_boliviensis_boliviensis
ENSELUG00000015969	r3hdm2	98	61.357	ENSSHAG00000003511	R3HDM2	95	65.085	Sarcophilus_harrisii
ENSELUG00000015969	r3hdm2	100	73.529	ENSSFOG00015011219	r3hdm2	100	74.339	Scleropages_formosus
ENSELUG00000015969	r3hdm2	100	79.193	ENSSMAG00000012073	r3hdm2	100	79.441	Scophthalmus_maximus
ENSELUG00000015969	r3hdm2	100	79.636	ENSSDUG00000019269	r3hdm2	100	80.328	Seriola_dumerili
ENSELUG00000015969	r3hdm2	100	80.018	ENSSLDG00000005252	r3hdm2	100	81.149	Seriola_lalandi_dorsalis
ENSELUG00000015969	r3hdm2	90	59.483	ENSSARG00000003958	R3HDM2	68	85.321	Sorex_araneus
ENSELUG00000015969	r3hdm2	100	58.900	ENSSPUG00000014132	R3HDM2	96	59.290	Sphenodon_punctatus
ENSELUG00000015969	r3hdm2	100	79.382	ENSSPAG00000022594	r3hdm2	100	80.563	Stegastes_partitus
ENSELUG00000015969	r3hdm2	100	64.236	ENSSSCG00000026498	R3HDM2	100	64.332	Sus_scrofa
ENSELUG00000015969	r3hdm2	76	60.277	ENSTGUG00000015881	R3HDM2	98	58.660	Taeniopygia_guttata
ENSELUG00000015969	r3hdm2	100	78.563	ENSTRUG00000015075	r3hdm2	99	74.663	Takifugu_rubripes
ENSELUG00000015969	r3hdm2	87	91.922	ENSTNIG00000007057	r3hdm2	89	93.872	Tetraodon_nigroviridis
ENSELUG00000015969	r3hdm2	80	65.068	ENSTBEG00000015967	R3HDM2	78	65.068	Tupaia_belangeri
ENSELUG00000015969	r3hdm2	83	70.051	ENSTTRG00000013082	R3HDM2	91	62.162	Tursiops_truncatus
ENSELUG00000015969	r3hdm2	100	61.161	ENSUAMG00000020913	R3HDM2	96	64.824	Ursus_americanus
ENSELUG00000015969	r3hdm2	100	63.249	ENSUMAG00000019179	R3HDM2	96	63.072	Ursus_maritimus
ENSELUG00000015969	r3hdm2	84	82.295	ENSVPAG00000008656	R3HDM2	85	82.432	Vicugna_pacos
ENSELUG00000015969	r3hdm2	92	65.558	ENSVVUG00000018014	R3HDM2	93	65.029	Vulpes_vulpes
ENSELUG00000015969	r3hdm2	100	59.821	ENSXETG00000017153	r3hdm2	96	62.701	Xenopus_tropicalis
ENSELUG00000015969	r3hdm2	100	77.535	ENSXCOG00000013882	r3hdm2	100	78.687	Xiphophorus_couchianus
ENSELUG00000015969	r3hdm2	100	77.535	ENSXMAG00000017978	r3hdm2	100	78.687	Xiphophorus_maculatus