EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000015981 (Gene tree)
Gene ID: 105025822
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 12836 bases
Position: chrLG04:12390357-12403192
Accession: 105025822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000016123	Exo_endo_phos	PF03372.23	2.9e-18	1	1
ENSELUP00000036606	Exo_endo_phos	PF03372.23	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025382	-	1680	-	ENSELUP00000036606	559 (aa)	-	-
ENSELUT00000025390	-	4021	XM_010896802	ENSELUP00000016123	568 (aa)	XP_010895104	UPI000576129E

Gene Model

Click here to download ENSELUG00000015981's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000015981	cnot6b	99	73.227	ENSELUG00000013353	cnot6l	87	73.227
ENSELUG00000015981	cnot6b	99	86.292	ENSELUG00000024580	cnot6a	100	86.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015981	cnot6b	99	83.245	ENSG00000113300	CNOT6	100	89.744	Homo_sapiens
ENSELUG00000015981	cnot6b	99	89.771	ENSAPOG00000009994	cnot6b	100	89.771	Acanthochromis_polyacanthus
ENSELUG00000015981	cnot6b	99	83.304	ENSAMEG00000000949	CNOT6	99	83.304	Ailuropoda_melanoleuca
ENSELUG00000015981	cnot6b	99	88.183	ENSACIG00000016566	cnot6b	100	88.183	Amphilophus_citrinellus
ENSELUG00000015981	cnot6b	99	89.771	ENSAOCG00000006893	cnot6b	100	89.771	Amphiprion_ocellaris
ENSELUG00000015981	cnot6b	100	89.613	ENSAPEG00000016949	cnot6b	100	89.771	Amphiprion_percula
ENSELUG00000015981	cnot6b	99	87.478	ENSATEG00000007862	cnot6b	100	87.478	Anabas_testudineus
ENSELUG00000015981	cnot6b	99	83.245	ENSAPLG00000012715	CNOT6	99	83.951	Anas_platyrhynchos
ENSELUG00000015981	cnot6b	99	82.892	ENSACAG00000016548	CNOT6	100	82.892	Anolis_carolinensis
ENSELUG00000015981	cnot6b	99	83.422	ENSANAG00000030436	CNOT6	96	83.422	Aotus_nancymaae
ENSELUG00000015981	cnot6b	99	87.831	ENSACLG00000008279	cnot6b	100	88.889	Astatotilapia_calliptera
ENSELUG00000015981	cnot6b	99	87.302	ENSAMXG00000019140	cnot6a	100	87.302	Astyanax_mexicanus
ENSELUG00000015981	cnot6b	99	85.891	ENSAMXG00000034694	cnot6b	100	85.891	Astyanax_mexicanus
ENSELUG00000015981	cnot6b	99	83.598	ENSBTAG00000017362	CNOT6	100	83.598	Bos_taurus
ENSELUG00000015981	cnot6b	99	83.598	ENSCJAG00000009795	CNOT6	100	83.598	Callithrix_jacchus
ENSELUG00000015981	cnot6b	99	83.598	ENSCAFG00000000464	CNOT6	100	83.598	Canis_familiaris
ENSELUG00000015981	cnot6b	99	83.598	ENSCAFG00020002441	CNOT6	100	83.598	Canis_lupus_dingo
ENSELUG00000015981	cnot6b	99	83.245	ENSCHIG00000019100	CNOT6	100	83.245	Capra_hircus
ENSELUG00000015981	cnot6b	99	81.834	ENSTSYG00000003982	CNOT6	100	81.834	Carlito_syrichta
ENSELUG00000015981	cnot6b	99	79.012	ENSCPOG00000035657	CNOT6	100	79.012	Cavia_porcellus
ENSELUG00000015981	cnot6b	99	79.012	ENSCCAG00000033670	CNOT6	100	79.012	Cebus_capucinus
ENSELUG00000015981	cnot6b	99	83.245	ENSCATG00000042014	CNOT6	100	83.245	Cercocebus_atys
ENSELUG00000015981	cnot6b	99	82.187	ENSCLAG00000010489	CNOT6	100	82.187	Chinchilla_lanigera
ENSELUG00000015981	cnot6b	99	83.245	ENSCSAG00000008165	CNOT6	100	83.245	Chlorocebus_sabaeus
ENSELUG00000015981	cnot6b	99	81.658	ENSCHOG00000009680	CNOT6	100	82.363	Choloepus_hoffmanni
ENSELUG00000015981	cnot6b	99	83.422	ENSCPBG00000008908	CNOT6	100	84.127	Chrysemys_picta_bellii
ENSELUG00000015981	cnot6b	99	83.422	ENSCANG00000026756	CNOT6	100	83.422	Colobus_angolensis_palliatus
ENSELUG00000015981	cnot6b	99	82.011	ENSCGRG00001011452	Cnot6	100	82.011	Cricetulus_griseus_chok1gshd
ENSELUG00000015981	cnot6b	99	80.247	ENSCGRG00000010407	Cnot6	100	80.247	Cricetulus_griseus_crigri
ENSELUG00000015981	cnot6b	99	88.536	ENSCSEG00000010939	cnot6b	100	88.536	Cynoglossus_semilaevis
ENSELUG00000015981	cnot6b	99	87.478	ENSCVAG00000010538	cnot6b	100	87.478	Cyprinodon_variegatus
ENSELUG00000015981	cnot6b	99	87.654	ENSDARG00000008255	cnot6a	100	87.654	Danio_rerio
ENSELUG00000015981	cnot6b	99	85.362	ENSDARG00000101072	cnot6b	100	85.362	Danio_rerio
ENSELUG00000015981	cnot6b	99	83.774	ENSDNOG00000041644	CNOT6	100	83.774	Dasypus_novemcinctus
ENSELUG00000015981	cnot6b	99	75.571	ENSDORG00000001708	Cnot6	100	75.571	Dipodomys_ordii
ENSELUG00000015981	cnot6b	99	67.077	ENSETEG00000006975	CNOT6	100	67.077	Echinops_telfairi
ENSELUG00000015981	cnot6b	99	83.069	ENSEASG00005012794	-	100	83.069	Equus_asinus_asinus
ENSELUG00000015981	cnot6b	90	78.824	ENSEASG00005012957	-	99	78.824	Equus_asinus_asinus
ENSELUG00000015981	cnot6b	99	79.211	ENSECAG00000012704	-	99	79.211	Equus_caballus
ENSELUG00000015981	cnot6b	99	83.598	ENSECAG00000019325	CNOT6	100	83.598	Equus_caballus
ENSELUG00000015981	cnot6b	99	82.716	ENSEEUG00000015382	CNOT6	100	82.716	Erinaceus_europaeus
ENSELUG00000015981	cnot6b	99	83.598	ENSFCAG00000001881	CNOT6	100	83.598	Felis_catus
ENSELUG00000015981	cnot6b	99	83.422	ENSFALG00000007699	CNOT6	100	84.127	Ficedula_albicollis
ENSELUG00000015981	cnot6b	99	82.540	ENSFDAG00000001999	CNOT6	100	82.540	Fukomys_damarensis
ENSELUG00000015981	cnot6b	72	85.976	ENSFHEG00000013756	cnot6b	100	85.976	Fundulus_heteroclitus
ENSELUG00000015981	cnot6b	93	90.960	ENSGMOG00000009767	cnot6b	99	90.960	Gadus_morhua
ENSELUG00000015981	cnot6b	99	83.245	ENSGALG00000034316	CNOT6	100	83.951	Gallus_gallus
ENSELUG00000015981	cnot6b	99	87.478	ENSGAFG00000008525	cnot6b	100	87.478	Gambusia_affinis
ENSELUG00000015981	cnot6b	93	89.831	ENSGACG00000018046	cnot6b	99	89.831	Gasterosteus_aculeatus
ENSELUG00000015981	cnot6b	99	69.892	ENSGAGG00000012176	CNOT6	100	70.609	Gopherus_agassizii
ENSELUG00000015981	cnot6b	99	83.245	ENSGGOG00000003675	CNOT6	100	83.245	Gorilla_gorilla
ENSELUG00000015981	cnot6b	99	88.007	ENSHBUG00000002819	cnot6b	100	89.065	Haplochromis_burtoni
ENSELUG00000015981	cnot6b	99	82.187	ENSHGLG00000017756	CNOT6	100	82.187	Heterocephalus_glaber_female
ENSELUG00000015981	cnot6b	99	82.187	ENSHGLG00100005747	CNOT6	100	82.187	Heterocephalus_glaber_male
ENSELUG00000015981	cnot6b	99	86.596	ENSHCOG00000016176	cnot6b	100	87.654	Hippocampus_comes
ENSELUG00000015981	cnot6b	99	86.772	ENSIPUG00000019831	cnot6a	100	86.772	Ictalurus_punctatus
ENSELUG00000015981	cnot6b	99	85.185	ENSIPUG00000017482	cnot6b	100	85.185	Ictalurus_punctatus
ENSELUG00000015981	cnot6b	99	83.245	ENSSTOG00000002803	CNOT6	100	83.245	Ictidomys_tridecemlineatus
ENSELUG00000015981	cnot6b	99	82.187	ENSJJAG00000012296	Cnot6	100	82.187	Jaculus_jaculus
ENSELUG00000015981	cnot6b	99	86.949	ENSKMAG00000004640	cnot6b	100	86.949	Kryptolebias_marmoratus
ENSELUG00000015981	cnot6b	99	87.478	ENSLBEG00000027917	cnot6b	100	88.536	Labrus_bergylta
ENSELUG00000015981	cnot6b	99	89.242	ENSLOCG00000010102	cnot6b	99	89.242	Lepisosteus_oculatus
ENSELUG00000015981	cnot6b	99	84.127	ENSLAFG00000016742	CNOT6	100	84.127	Loxodonta_africana
ENSELUG00000015981	cnot6b	99	83.245	ENSMFAG00000030867	CNOT6	100	83.245	Macaca_fascicularis
ENSELUG00000015981	cnot6b	99	83.245	ENSMMUG00000018690	CNOT6	100	83.245	Macaca_mulatta
ENSELUG00000015981	cnot6b	99	83.245	ENSMNEG00000038565	CNOT6	100	83.245	Macaca_nemestrina
ENSELUG00000015981	cnot6b	99	83.245	ENSMLEG00000010555	CNOT6	100	83.245	Mandrillus_leucophaeus
ENSELUG00000015981	cnot6b	100	89.789	ENSMAMG00000007515	cnot6b	100	89.947	Mastacembelus_armatus
ENSELUG00000015981	cnot6b	99	87.831	ENSMZEG00005012899	cnot6b	100	88.889	Maylandia_zebra
ENSELUG00000015981	cnot6b	99	82.363	ENSMAUG00000019798	Cnot6	100	82.363	Mesocricetus_auratus
ENSELUG00000015981	cnot6b	98	75.451	ENSMICG00000028378	-	99	75.451	Microcebus_murinus
ENSELUG00000015981	cnot6b	99	81.834	ENSMICG00000013018	-	100	81.834	Microcebus_murinus
ENSELUG00000015981	cnot6b	99	82.716	ENSMOCG00000021662	Cnot6	100	82.716	Microtus_ochrogaster
ENSELUG00000015981	cnot6b	99	87.302	ENSMMOG00000003227	cnot6b	100	87.302	Mola_mola
ENSELUG00000015981	cnot6b	99	83.069	ENSMODG00000003979	CNOT6	100	83.774	Monodelphis_domestica
ENSELUG00000015981	cnot6b	99	89.594	ENSMALG00000014251	cnot6b	100	89.594	Monopterus_albus
ENSELUG00000015981	cnot6b	99	82.540	MGP_CAROLIEiJ_G0016277	Cnot6	100	82.540	Mus_caroli
ENSELUG00000015981	cnot6b	99	82.540	ENSMUSG00000020362	Cnot6	100	82.540	Mus_musculus
ENSELUG00000015981	cnot6b	99	82.540	MGP_PahariEiJ_G0017413	Cnot6	100	82.540	Mus_pahari
ENSELUG00000015981	cnot6b	99	82.363	MGP_SPRETEiJ_G0017122	Cnot6	100	82.363	Mus_spretus
ENSELUG00000015981	cnot6b	99	83.951	ENSMPUG00000000587	CNOT6	96	83.951	Mustela_putorius_furo
ENSELUG00000015981	cnot6b	99	82.517	ENSMLUG00000010257	CNOT6	100	82.517	Myotis_lucifugus
ENSELUG00000015981	cnot6b	100	81.338	ENSNGAG00000008269	Cnot6	100	82.218	Nannospalax_galili
ENSELUG00000015981	cnot6b	99	88.007	ENSNBRG00000010798	cnot6b	100	89.065	Neolamprologus_brichardi
ENSELUG00000015981	cnot6b	99	82.363	ENSNLEG00000002322	CNOT6	100	82.363	Nomascus_leucogenys
ENSELUG00000015981	cnot6b	83	79.018	ENSMEUG00000000025	CNOT6	81	80.804	Notamacropus_eugenii
ENSELUG00000015981	cnot6b	88	84.048	ENSOPRG00000008244	-	88	84.048	Ochotona_princeps
ENSELUG00000015981	cnot6b	99	81.481	ENSODEG00000007041	CNOT6	100	81.481	Octodon_degus
ENSELUG00000015981	cnot6b	74	91.017	ENSONIG00000013027	cnot6b	99	91.017	Oreochromis_niloticus
ENSELUG00000015981	cnot6b	99	82.716	ENSOANG00000010226	CNOT6	100	82.716	Ornithorhynchus_anatinus
ENSELUG00000015981	cnot6b	99	82.425	ENSOCUG00000011083	CNOT6	100	82.425	Oryctolagus_cuniculus
ENSELUG00000015981	cnot6b	99	88.360	ENSORLG00000005059	cnot6b	100	88.360	Oryzias_latipes
ENSELUG00000015981	cnot6b	99	88.360	ENSORLG00020012784	cnot6b	100	88.360	Oryzias_latipes_hni
ENSELUG00000015981	cnot6b	93	87.947	ENSORLG00015022658	cnot6b	98	87.947	Oryzias_latipes_hsok
ENSELUG00000015981	cnot6b	99	88.889	ENSOMEG00000005295	cnot6b	100	88.889	Oryzias_melastigma
ENSELUG00000015981	cnot6b	94	82.584	ENSOGAG00000032470	CNOT6	100	82.584	Otolemur_garnettii
ENSELUG00000015981	cnot6b	97	82.609	ENSOARG00000001003	CNOT6	100	82.609	Ovis_aries
ENSELUG00000015981	cnot6b	99	83.245	ENSPPAG00000032253	CNOT6	100	83.245	Pan_paniscus
ENSELUG00000015981	cnot6b	99	83.422	ENSPPRG00000011912	CNOT6	100	83.422	Panthera_pardus
ENSELUG00000015981	cnot6b	99	83.422	ENSPTIG00000016794	CNOT6	100	83.422	Panthera_tigris_altaica
ENSELUG00000015981	cnot6b	99	83.245	ENSPTRG00000017636	CNOT6	100	83.245	Pan_troglodytes
ENSELUG00000015981	cnot6b	99	83.245	ENSPANG00000016191	CNOT6	100	83.245	Papio_anubis
ENSELUG00000015981	cnot6b	99	87.302	ENSPKIG00000021368	cnot6b	100	87.302	Paramormyrops_kingsleyae
ENSELUG00000015981	cnot6b	98	83.935	ENSPSIG00000017307	CNOT6	100	84.116	Pelodiscus_sinensis
ENSELUG00000015981	cnot6b	99	88.536	ENSPMGG00000011238	cnot6b	100	88.536	Periophthalmus_magnuspinnatus
ENSELUG00000015981	cnot6b	99	81.129	ENSPEMG00000000627	Cnot6	100	82.011	Peromyscus_maniculatus_bairdii
ENSELUG00000015981	cnot6b	99	83.069	ENSPCIG00000020319	CNOT6	99	83.774	Phascolarctos_cinereus
ENSELUG00000015981	cnot6b	99	87.654	ENSPFOG00000006291	cnot6b	100	87.654	Poecilia_formosa
ENSELUG00000015981	cnot6b	99	84.480	ENSPLAG00000008266	cnot6b	100	84.480	Poecilia_latipinna
ENSELUG00000015981	cnot6b	99	87.831	ENSPMEG00000009091	cnot6b	100	87.831	Poecilia_mexicana
ENSELUG00000015981	cnot6b	99	86.596	ENSPREG00000003713	cnot6b	100	86.596	Poecilia_reticulata
ENSELUG00000015981	cnot6b	99	83.245	ENSPPYG00000016137	CNOT6	100	83.245	Pongo_abelii
ENSELUG00000015981	cnot6b	61	89.286	ENSPCAG00000005599	-	59	89.286	Procavia_capensis
ENSELUG00000015981	cnot6b	99	77.954	ENSPCOG00000017359	CNOT6	100	78.660	Propithecus_coquereli
ENSELUG00000015981	cnot6b	99	80.247	ENSPVAG00000003069	CNOT6	100	80.247	Pteropus_vampyrus
ENSELUG00000015981	cnot6b	99	88.007	ENSPNYG00000000321	cnot6b	100	89.065	Pundamilia_nyererei
ENSELUG00000015981	cnot6b	99	87.831	ENSPNAG00000029586	cnot6a	100	87.831	Pygocentrus_nattereri
ENSELUG00000015981	cnot6b	99	86.772	ENSPNAG00000028816	cnot6b	100	86.772	Pygocentrus_nattereri
ENSELUG00000015981	cnot6b	99	82.011	ENSRNOG00000054891	Cnot6	100	82.011	Rattus_norvegicus
ENSELUG00000015981	cnot6b	99	83.069	ENSRBIG00000004309	CNOT6	100	83.069	Rhinopithecus_bieti
ENSELUG00000015981	cnot6b	99	83.069	ENSRROG00000035378	CNOT6	100	83.069	Rhinopithecus_roxellana
ENSELUG00000015981	cnot6b	99	83.422	ENSSBOG00000030494	CNOT6	100	83.422	Saimiri_boliviensis_boliviensis
ENSELUG00000015981	cnot6b	99	83.069	ENSSHAG00000017436	CNOT6	100	83.774	Sarcophilus_harrisii
ENSELUG00000015981	cnot6b	99	88.007	ENSSFOG00015015133	CNOT6	100	88.713	Scleropages_formosus
ENSELUG00000015981	cnot6b	99	86.772	ENSSFOG00015022383	cnot6a	96	86.772	Scleropages_formosus
ENSELUG00000015981	cnot6b	100	89.261	ENSSMAG00000003084	cnot6b	100	89.418	Scophthalmus_maximus
ENSELUG00000015981	cnot6b	99	89.594	ENSSDUG00000004151	cnot6b	100	89.594	Seriola_dumerili
ENSELUG00000015981	cnot6b	99	88.536	ENSSLDG00000004448	cnot6b	100	89.594	Seriola_lalandi_dorsalis
ENSELUG00000015981	cnot6b	64	66.205	ENSSARG00000012650	-	100	66.205	Sorex_araneus
ENSELUG00000015981	cnot6b	99	82.892	ENSSPUG00000007893	CNOT6	100	83.598	Sphenodon_punctatus
ENSELUG00000015981	cnot6b	99	89.771	ENSSPAG00000000149	cnot6b	100	89.771	Stegastes_partitus
ENSELUG00000015981	cnot6b	99	83.422	ENSSSCG00000014009	CNOT6	100	83.422	Sus_scrofa
ENSELUG00000015981	cnot6b	99	83.069	ENSTGUG00000001119	CNOT6	100	83.774	Taeniopygia_guttata
ENSELUG00000015981	cnot6b	99	85.062	ENSTRUG00000002818	cnot6b	100	85.362	Takifugu_rubripes
ENSELUG00000015981	cnot6b	99	85.940	ENSTNIG00000004443	cnot6b	99	86.243	Tetraodon_nigroviridis
ENSELUG00000015981	cnot6b	75	73.913	ENSTBEG00000017094	-	87	73.913	Tupaia_belangeri
ENSELUG00000015981	cnot6b	99	83.245	ENSTTRG00000009363	CNOT6	100	83.245	Tursiops_truncatus
ENSELUG00000015981	cnot6b	77	81.777	ENSUAMG00000004579	CNOT6	99	73.242	Ursus_americanus
ENSELUG00000015981	cnot6b	99	79.798	ENSUMAG00000024577	CNOT6	100	79.798	Ursus_maritimus
ENSELUG00000015981	cnot6b	84	86.486	ENSVPAG00000003593	CNOT6	83	86.486	Vicugna_pacos
ENSELUG00000015981	cnot6b	99	83.598	ENSVVUG00000026940	CNOT6	100	83.598	Vulpes_vulpes
ENSELUG00000015981	cnot6b	99	84.656	ENSXCOG00000003360	cnot6b	100	84.656	Xiphophorus_couchianus
ENSELUG00000015981	cnot6b	99	87.654	ENSXMAG00000008730	cnot6b	100	87.654	Xiphophorus_maculatus