EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000015993 (Gene tree)
Gene ID: 105012047
Gene Symbol: -
Alias: -
Full Name: histone-arginine methyltransferase CARM1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6947 bases
Position: chrLG09:17163770-17170716
Accession: 105012047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000016031	MTS	PF05175.14	1.2e-07	1	1
ENSELUP00000036570	MTS	PF05175.14	1.3e-07	1	1
ENSELUP00000016031	Methyltransf_31	PF13847.6	5.3e-07	1	1
ENSELUP00000036570	Methyltransf_31	PF13847.6	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025257	-	540	-	ENSELUP00000016017	179 (aa)	-	-
ENSELUT00000039606	-	1737	-	ENSELUP00000036570	578 (aa)	-	-
ENSELUT00000039594	-	1683	XM_013135150	ENSELUP00000016031	560 (aa)	XP_012990604	-

Gene Model

Click here to download ENSELUG00000015993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000015993's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000015993	-	53	35.390	ENSELUG00000009758	prmt2	77	35.390
ENSELUG00000015993	-	100	81.081	ENSELUG00000023839	carm1	100	82.095
ENSELUG00000015993	-	55	33.544	ENSELUG00000010394	prmt3	60	34.084
ENSELUG00000015993	-	54	38.141	ENSELUG00000002245	prmt6	86	38.141

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000015993	-	99	77.397	ENSG00000142453	CARM1	95	85.890	Homo_sapiens
ENSELUG00000015993	-	100	82.222	ENSAPOG00000017897	carm1	100	82.222	Acanthochromis_polyacanthus
ENSELUG00000015993	-	91	75.134	ENSAMEG00000011015	CARM1	100	75.492	Ailuropoda_melanoleuca
ENSELUG00000015993	-	100	81.538	ENSACIG00000013700	carm1	92	81.538	Amphilophus_citrinellus
ENSELUG00000015993	-	100	82.222	ENSAOCG00000024623	carm1	100	82.222	Amphiprion_ocellaris
ENSELUG00000015993	-	100	82.222	ENSAPEG00000021106	carm1	100	82.222	Amphiprion_percula
ENSELUG00000015993	-	100	81.026	ENSATEG00000008974	carm1	100	81.026	Anabas_testudineus
ENSELUG00000015993	-	91	79.478	ENSACAG00000015347	CARM1	100	79.478	Anolis_carolinensis
ENSELUG00000015993	-	99	77.069	ENSANAG00000027252	CARM1	95	77.414	Aotus_nancymaae
ENSELUG00000015993	-	100	82.222	ENSACLG00000004610	carm1	100	82.222	Astatotilapia_calliptera
ENSELUG00000015993	-	100	76.020	ENSAMXG00000018518	carm1	100	76.020	Astyanax_mexicanus
ENSELUG00000015993	-	99	78.045	ENSBTAG00000012048	CARM1	99	78.045	Bos_taurus
ENSELUG00000015993	-	99	77.436	ENSCJAG00000006228	CARM1	95	77.778	Callithrix_jacchus
ENSELUG00000015993	-	91	77.881	ENSCAFG00000017621	CARM1	99	78.253	Canis_familiaris
ENSELUG00000015993	-	99	75.456	ENSCAFG00020024515	-	96	75.456	Canis_lupus_dingo
ENSELUG00000015993	-	99	77.607	ENSCHIG00000008507	CARM1	96	77.949	Capra_hircus
ENSELUG00000015993	-	95	74.695	ENSTSYG00000001409	CARM1	100	76.981	Carlito_syrichta
ENSELUG00000015993	-	91	77.509	ENSCAPG00000009042	CARM1	100	77.358	Cavia_aperea
ENSELUG00000015993	-	91	77.509	ENSCPOG00000015465	CARM1	87	78.253	Cavia_porcellus
ENSELUG00000015993	-	99	77.397	ENSCCAG00000020727	CARM1	95	77.778	Cebus_capucinus
ENSELUG00000015993	-	99	77.265	ENSCATG00000034760	CARM1	99	76.950	Cercocebus_atys
ENSELUG00000015993	-	91	78.293	ENSCLAG00000011012	CARM1	100	78.293	Chinchilla_lanigera
ENSELUG00000015993	-	99	77.265	ENSCSAG00000006939	CARM1	95	77.607	Chlorocebus_sabaeus
ENSELUG00000015993	-	92	78.889	ENSCPBG00000010065	CARM1	100	79.619	Chrysemys_picta_bellii
ENSELUG00000015993	-	98	67.770	ENSCANG00000004191	CARM1	94	68.118	Colobus_angolensis_palliatus
ENSELUG00000015993	-	99	77.015	ENSCGRG00001023212	Carm1	95	77.702	Cricetulus_griseus_chok1gshd
ENSELUG00000015993	-	91	77.654	ENSCGRG00000008046	Carm1	99	78.399	Cricetulus_griseus_crigri
ENSELUG00000015993	-	100	77.436	ENSCSEG00000013769	carm1	99	82.472	Cynoglossus_semilaevis
ENSELUG00000015993	-	100	81.538	ENSCVAG00000010021	carm1	100	81.538	Cyprinodon_variegatus
ENSELUG00000015993	-	100	80.645	ENSDARG00000018698	carm1	100	80.645	Danio_rerio
ENSELUG00000015993	-	89	71.565	ENSDNOG00000018868	CARM1	100	77.384	Dasypus_novemcinctus
ENSELUG00000015993	-	91	76.119	ENSDORG00000013395	Carm1	99	71.478	Dipodomys_ordii
ENSELUG00000015993	-	79	72.500	ENSETEG00000005386	-	86	72.500	Echinops_telfairi
ENSELUG00000015993	-	100	67.808	ENSEBUG00000015598	carm1	99	65.239	Eptatretus_burgeri
ENSELUG00000015993	-	99	74.872	ENSEASG00005007536	CARM1	95	76.724	Equus_asinus_asinus
ENSELUG00000015993	-	99	77.265	ENSECAG00000013563	CARM1	96	77.607	Equus_caballus
ENSELUG00000015993	-	99	77.094	ENSFCAG00000004893	CARM1	96	77.436	Felis_catus
ENSELUG00000015993	-	91	78.026	ENSFDAG00000007838	CARM1	100	78.585	Fukomys_damarensis
ENSELUG00000015993	-	99	81.347	ENSFHEG00000001930	carm1	100	79.793	Fundulus_heteroclitus
ENSELUG00000015993	-	100	82.705	ENSGMOG00000009257	carm1	100	82.705	Gadus_morhua
ENSELUG00000015993	-	100	81.197	ENSGAFG00000006197	carm1	100	81.197	Gambusia_affinis
ENSELUG00000015993	-	100	82.483	ENSGACG00000005531	carm1	100	82.483	Gasterosteus_aculeatus
ENSELUG00000015993	-	91	79.291	ENSGAGG00000016821	CARM1	100	78.884	Gopherus_agassizii
ENSELUG00000015993	-	99	73.504	ENSGGOG00000000695	CARM1	97	72.081	Gorilla_gorilla
ENSELUG00000015993	-	100	82.222	ENSHBUG00000009307	carm1	100	82.222	Haplochromis_burtoni
ENSELUG00000015993	-	99	77.358	ENSHGLG00000007754	CARM1	96	77.873	Heterocephalus_glaber_female
ENSELUG00000015993	-	91	78.026	ENSHGLG00100016789	CARM1	100	78.585	Heterocephalus_glaber_male
ENSELUG00000015993	-	100	79.110	ENSHCOG00000007723	carm1	98	79.620	Hippocampus_comes
ENSELUG00000015993	-	100	81.633	ENSIPUG00000000942	carm1	100	81.633	Ictalurus_punctatus
ENSELUG00000015993	-	93	76.867	ENSSTOG00000007864	CARM1	100	77.547	Ictidomys_tridecemlineatus
ENSELUG00000015993	-	99	76.884	ENSJJAG00000008047	Carm1	98	77.226	Jaculus_jaculus
ENSELUG00000015993	-	100	81.368	ENSKMAG00000020575	carm1	100	81.368	Kryptolebias_marmoratus
ENSELUG00000015993	-	100	82.735	ENSLBEG00000010071	carm1	100	82.735	Labrus_bergylta
ENSELUG00000015993	-	91	74.955	ENSLACG00000015696	CARM1	99	74.955	Latimeria_chalumnae
ENSELUG00000015993	-	100	79.145	ENSLOCG00000006077	carm1	99	79.145	Lepisosteus_oculatus
ENSELUG00000015993	-	91	72.931	ENSLAFG00000004431	CARM1	100	72.931	Loxodonta_africana
ENSELUG00000015993	-	99	77.265	ENSMFAG00000036898	CARM1	100	75.804	Macaca_fascicularis
ENSELUG00000015993	-	99	77.265	ENSMMUG00000004401	CARM1	97	75.804	Macaca_mulatta
ENSELUG00000015993	-	99	77.265	ENSMNEG00000031496	CARM1	99	77.607	Macaca_nemestrina
ENSELUG00000015993	-	91	77.881	ENSMLEG00000006303	CARM1	100	78.253	Mandrillus_leucophaeus
ENSELUG00000015993	-	100	81.368	ENSMAMG00000002021	carm1	100	81.368	Mastacembelus_armatus
ENSELUG00000015993	-	100	82.222	ENSMZEG00005000446	carm1	100	82.222	Maylandia_zebra
ENSELUG00000015993	-	99	77.568	ENSMICG00000009787	CARM1	99	78.082	Microcebus_murinus
ENSELUG00000015993	-	99	74.872	ENSMOCG00000004215	Carm1	96	75.556	Microtus_ochrogaster
ENSELUG00000015993	-	100	81.880	ENSMMOG00000017018	carm1	100	81.880	Mola_mola
ENSELUG00000015993	-	91	75.088	ENSMODG00000006104	CARM1	99	75.088	Monodelphis_domestica
ENSELUG00000015993	-	100	81.368	ENSMALG00000002150	carm1	100	81.368	Monopterus_albus
ENSELUG00000015993	-	99	77.358	MGP_CAROLIEiJ_G0031876	Carm1	98	77.358	Mus_caroli
ENSELUG00000015993	-	99	77.358	ENSMUSG00000032185	Carm1	95	77.873	Mus_musculus
ENSELUG00000015993	-	99	77.358	MGP_PahariEiJ_G0014742	Carm1	95	77.873	Mus_pahari
ENSELUG00000015993	-	99	77.358	MGP_SPRETEiJ_G0033000	Carm1	95	77.873	Mus_spretus
ENSELUG00000015993	-	91	75.090	ENSMPUG00000005752	CARM1	100	75.448	Mustela_putorius_furo
ENSELUG00000015993	-	92	74.159	ENSMLUG00000011075	CARM1	98	75.133	Myotis_lucifugus
ENSELUG00000015993	-	99	77.358	ENSNGAG00000001362	Carm1	95	77.873	Nannospalax_galili
ENSELUG00000015993	-	97	76.720	ENSNLEG00000012371	CARM1	100	77.072	Nomascus_leucogenys
ENSELUG00000015993	-	95	76.079	ENSODEG00000015950	CARM1	100	78.358	Octodon_degus
ENSELUG00000015993	-	100	82.051	ENSONIG00000006259	carm1	98	82.051	Oreochromis_niloticus
ENSELUG00000015993	-	91	69.027	ENSOCUG00000003368	CARM1	100	69.204	Oryctolagus_cuniculus
ENSELUG00000015993	-	100	80.513	ENSORLG00000017315	carm1	100	80.513	Oryzias_latipes
ENSELUG00000015993	-	100	78.082	ENSORLG00020017371	carm1	100	78.584	Oryzias_latipes_hni
ENSELUG00000015993	-	100	80.684	ENSORLG00015009932	carm1	100	80.684	Oryzias_latipes_hsok
ENSELUG00000015993	-	61	89.796	ENSOMEG00000013937	carm1	100	89.796	Oryzias_melastigma
ENSELUG00000015993	-	93	72.633	ENSOGAG00000016835	CARM1	100	72.680	Otolemur_garnettii
ENSELUG00000015993	-	91	78.253	ENSOARG00000017317	CARM1	97	78.625	Ovis_aries
ENSELUG00000015993	-	91	78.067	ENSPPAG00000030586	CARM1	100	77.736	Pan_paniscus
ENSELUG00000015993	-	91	77.695	ENSPPRG00000007534	CARM1	88	78.067	Panthera_pardus
ENSELUG00000015993	-	77	75.221	ENSPTIG00000020631	CARM1	89	75.221	Panthera_tigris_altaica
ENSELUG00000015993	-	99	77.397	ENSPTRG00000010485	CARM1	97	75.973	Pan_troglodytes
ENSELUG00000015993	-	99	77.265	ENSPANG00000021071	CARM1	96	77.607	Papio_anubis
ENSELUG00000015993	-	100	80.342	ENSPKIG00000005227	carm1	100	80.887	Paramormyrops_kingsleyae
ENSELUG00000015993	-	100	78.305	ENSPKIG00000003610	-	98	79.455	Paramormyrops_kingsleyae
ENSELUG00000015993	-	100	80.855	ENSPMGG00000005086	carm1	96	80.855	Periophthalmus_magnuspinnatus
ENSELUG00000015993	-	93	77.390	ENSPEMG00000023286	Carm1	100	78.399	Peromyscus_maniculatus_bairdii
ENSELUG00000015993	-	95	64.225	ENSPMAG00000003740	carm1	100	62.541	Petromyzon_marinus
ENSELUG00000015993	-	99	78.866	ENSPCIG00000017124	CARM1	95	78.767	Phascolarctos_cinereus
ENSELUG00000015993	-	100	81.538	ENSPFOG00000019570	carm1	100	81.122	Poecilia_formosa
ENSELUG00000015993	-	100	81.538	ENSPLAG00000011942	carm1	100	81.538	Poecilia_latipinna
ENSELUG00000015993	-	100	81.709	ENSPMEG00000012879	carm1	100	81.709	Poecilia_mexicana
ENSELUG00000015993	-	100	81.741	ENSPREG00000007471	carm1	100	81.741	Poecilia_reticulata
ENSELUG00000015993	-	88	86.364	ENSPPYG00000009565	CARM1	97	71.581	Pongo_abelii
ENSELUG00000015993	-	91	78.212	ENSPCOG00000018916	CARM1	100	77.736	Propithecus_coquereli
ENSELUG00000015993	-	87	75.529	ENSPVAG00000012161	CARM1	84	76.471	Pteropus_vampyrus
ENSELUG00000015993	-	100	82.222	ENSPNYG00000022506	carm1	100	82.222	Pundamilia_nyererei
ENSELUG00000015993	-	100	81.463	ENSPNAG00000023691	carm1	100	81.463	Pygocentrus_nattereri
ENSELUG00000015993	-	99	77.358	ENSRNOG00000031129	Carm1	95	77.873	Rattus_norvegicus
ENSELUG00000015993	-	98	74.739	ENSRBIG00000029213	CARM1	98	75.087	Rhinopithecus_bieti
ENSELUG00000015993	-	92	78.044	ENSRROG00000033867	CARM1	100	77.547	Rhinopithecus_roxellana
ENSELUG00000015993	-	91	77.695	ENSSBOG00000031852	CARM1	99	78.067	Saimiri_boliviensis_boliviensis
ENSELUG00000015993	-	93	79.044	ENSSHAG00000005586	CARM1	99	79.044	Sarcophilus_harrisii
ENSELUG00000015993	-	100	80.301	ENSSFOG00015018537	-	100	81.135	Scleropages_formosus
ENSELUG00000015993	-	100	81.507	ENSSFOG00015010235	carm1	90	81.507	Scleropages_formosus
ENSELUG00000015993	-	100	82.877	ENSSMAG00000016701	carm1	99	82.877	Scophthalmus_maximus
ENSELUG00000015993	-	100	81.709	ENSSDUG00000023353	carm1	100	81.709	Seriola_dumerili
ENSELUG00000015993	-	100	81.880	ENSSLDG00000011328	carm1	100	81.880	Seriola_lalandi_dorsalis
ENSELUG00000015993	-	95	76.978	ENSSPUG00000004517	CARM1	99	76.978	Sphenodon_punctatus
ENSELUG00000015993	-	100	82.051	ENSSPAG00000008826	carm1	100	82.051	Stegastes_partitus
ENSELUG00000015993	-	99	77.607	ENSSSCG00000013633	CARM1	96	77.949	Sus_scrofa
ENSELUG00000015993	-	100	81.678	ENSTRUG00000012690	carm1	100	81.678	Takifugu_rubripes
ENSELUG00000015993	-	100	80.651	ENSTNIG00000014008	carm1	99	80.651	Tetraodon_nigroviridis
ENSELUG00000015993	-	99	71.795	ENSTTRG00000016644	CARM1	95	72.137	Tursiops_truncatus
ENSELUG00000015993	-	99	74.271	ENSUAMG00000005865	CARM1	97	77.757	Ursus_americanus
ENSELUG00000015993	-	93	75.468	ENSUMAG00000024981	CARM1	97	75.843	Ursus_maritimus
ENSELUG00000015993	-	99	75.430	ENSVVUG00000017717	CARM1	91	84.439	Vulpes_vulpes
ENSELUG00000015993	-	99	75.041	ENSXETG00000009357	carm1	99	75.041	Xenopus_tropicalis
ENSELUG00000015993	-	100	81.368	ENSXCOG00000010644	carm1	96	81.368	Xiphophorus_couchianus
ENSELUG00000015993	-	100	81.368	ENSXMAG00000002542	carm1	100	81.368	Xiphophorus_maculatus