EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016022 (Gene tree)
Gene ID: 105019569
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 7989 bases
Position: chrLG21:16819898-16827886
Accession: 105019569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036648	zf-RanBP	PF00641.18	4.8e-07	1	1
ENSELUP00000016169	zf-RanBP	PF00641.18	9.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025443	-	1284	-	ENSELUP00000036648	427 (aa)	-	-
ENSELUT00000025433	-	2749	XM_010885849	ENSELUP00000016169	699 (aa)	XP_010884151	UPI0005773FA2

Gene Model

Click here to download ENSELUG00000016022's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04217	Necroptosis	KEGG
els04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016022	shrprbck1r	94	51.773	ENSELUG00000022786	rbck1	98	46.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016022	shrprbck1r	59	61.575	ENSAPOG00000023352	sharpin	95	61.575	Acanthochromis_polyacanthus
ENSELUG00000016022	shrprbck1r	100	75.627	ENSAPOG00000022737	shrprbck1r	100	75.627	Acanthochromis_polyacanthus
ENSELUG00000016022	shrprbck1r	100	74.167	ENSACIG00000002184	shrprbck1r	100	74.167	Amphilophus_citrinellus
ENSELUG00000016022	shrprbck1r	59	61.045	ENSAOCG00000017464	sharpin	95	61.045	Amphiprion_ocellaris
ENSELUG00000016022	shrprbck1r	100	76.364	ENSAOCG00000002890	shrprbck1r	100	76.364	Amphiprion_ocellaris
ENSELUG00000016022	shrprbck1r	59	61.575	ENSAPEG00000004049	sharpin	95	61.575	Amphiprion_percula
ENSELUG00000016022	shrprbck1r	100	75.905	ENSAPEG00000023274	shrprbck1r	100	75.905	Amphiprion_percula
ENSELUG00000016022	shrprbck1r	100	73.184	ENSATEG00000014561	shrprbck1r	100	73.464	Anabas_testudineus
ENSELUG00000016022	shrprbck1r	59	61.667	ENSATEG00000007832	sharpin	87	61.667	Anabas_testudineus
ENSELUG00000016022	shrprbck1r	100	75.140	ENSACLG00000022609	shrprbck1r	100	75.140	Astatotilapia_calliptera
ENSELUG00000016022	shrprbck1r	55	57.252	ENSAMXG00000006229	sharpin	97	57.252	Astyanax_mexicanus
ENSELUG00000016022	shrprbck1r	88	84.858	ENSAMXG00000021016	shrprbck1r	100	72.940	Astyanax_mexicanus
ENSELUG00000016022	shrprbck1r	100	70.376	ENSCSEG00000011306	shrprbck1r	100	70.376	Cynoglossus_semilaevis
ENSELUG00000016022	shrprbck1r	100	72.370	ENSCVAG00000007250	shrprbck1r	100	72.370	Cyprinodon_variegatus
ENSELUG00000016022	shrprbck1r	64	54.741	ENSCVAG00000006586	sharpin	99	54.741	Cyprinodon_variegatus
ENSELUG00000016022	shrprbck1r	55	56.030	ENSDARG00000076995	sharpin	95	56.030	Danio_rerio
ENSELUG00000016022	shrprbck1r	100	73.780	ENSDARG00000059871	shrprbck1r	100	73.780	Danio_rerio
ENSELUG00000016022	shrprbck1r	59	58.907	ENSFHEG00000013564	sharpin	94	58.907	Fundulus_heteroclitus
ENSELUG00000016022	shrprbck1r	51	62.538	ENSGMOG00000010123	sharpin	91	62.538	Gadus_morhua
ENSELUG00000016022	shrprbck1r	61	44.836	ENSGAFG00000021405	sharpin	98	44.836	Gambusia_affinis
ENSELUG00000016022	shrprbck1r	100	70.588	ENSGAFG00000009309	shrprbck1r	100	70.588	Gambusia_affinis
ENSELUG00000016022	shrprbck1r	94	77.619	ENSGACG00000002544	shrprbck1r	99	74.664	Gasterosteus_aculeatus
ENSELUG00000016022	shrprbck1r	100	75.279	ENSHBUG00000021933	shrprbck1r	100	75.279	Haplochromis_burtoni
ENSELUG00000016022	shrprbck1r	59	56.386	ENSHCOG00000018847	sharpin	80	56.731	Hippocampus_comes
ENSELUG00000016022	shrprbck1r	97	70.893	ENSIPUG00000014247	shrprbck1r	96	70.893	Ictalurus_punctatus
ENSELUG00000016022	shrprbck1r	54	57.692	ENSIPUG00000011951	sharpin	99	57.436	Ictalurus_punctatus
ENSELUG00000016022	shrprbck1r	100	72.590	ENSKMAG00000015215	shrprbck1r	100	72.865	Kryptolebias_marmoratus
ENSELUG00000016022	shrprbck1r	59	58.531	ENSKMAG00000015204	sharpin	76	58.531	Kryptolebias_marmoratus
ENSELUG00000016022	shrprbck1r	59	62.233	ENSLBEG00000016624	sharpin	95	62.233	Labrus_bergylta
ENSELUG00000016022	shrprbck1r	100	75.208	ENSLBEG00000016876	shrprbck1r	100	75.346	Labrus_bergylta
ENSELUG00000016022	shrprbck1r	96	53.947	ENSLACG00000010948	-	97	53.959	Latimeria_chalumnae
ENSELUG00000016022	shrprbck1r	100	72.805	ENSLOCG00000008910	shrprbck1r	100	72.946	Lepisosteus_oculatus
ENSELUG00000016022	shrprbck1r	100	72.765	ENSMAMG00000022930	shrprbck1r	100	72.905	Mastacembelus_armatus
ENSELUG00000016022	shrprbck1r	51	70.588	ENSMAMG00000014645	sharpin	95	70.588	Mastacembelus_armatus
ENSELUG00000016022	shrprbck1r	100	75.000	ENSMZEG00005021257	shrprbck1r	100	75.000	Maylandia_zebra
ENSELUG00000016022	shrprbck1r	92	81.703	ENSMMOG00000003764	shrprbck1r	100	72.222	Mola_mola
ENSELUG00000016022	shrprbck1r	96	75.000	ENSMALG00000008861	shrprbck1r	95	75.000	Monopterus_albus
ENSELUG00000016022	shrprbck1r	51	70.588	ENSMALG00000020528	sharpin	96	70.588	Monopterus_albus
ENSELUG00000016022	shrprbck1r	100	75.000	ENSNBRG00000002270	shrprbck1r	100	75.000	Neolamprologus_brichardi
ENSELUG00000016022	shrprbck1r	100	75.209	ENSONIG00000014401	shrprbck1r	100	75.209	Oreochromis_niloticus
ENSELUG00000016022	shrprbck1r	55	59.305	ENSONIG00000009626	-	97	59.305	Oreochromis_niloticus
ENSELUG00000016022	shrprbck1r	100	71.189	ENSORLG00000007392	shrprbck1r	100	71.189	Oryzias_latipes
ENSELUG00000016022	shrprbck1r	59	60.570	ENSORLG00000017281	sharpin	95	60.570	Oryzias_latipes
ENSELUG00000016022	shrprbck1r	100	71.469	ENSORLG00020018619	shrprbck1r	100	71.469	Oryzias_latipes_hni
ENSELUG00000016022	shrprbck1r	59	60.329	ENSORLG00020000801	sharpin	95	60.329	Oryzias_latipes_hni
ENSELUG00000016022	shrprbck1r	100	70.448	ENSORLG00015018865	shrprbck1r	100	70.448	Oryzias_latipes_hsok
ENSELUG00000016022	shrprbck1r	59	60.377	ENSORLG00015009860	sharpin	95	60.377	Oryzias_latipes_hsok
ENSELUG00000016022	shrprbck1r	100	73.147	ENSOMEG00000012749	shrprbck1r	100	73.147	Oryzias_melastigma
ENSELUG00000016022	shrprbck1r	65	64.348	ENSPKIG00000018308	-	96	64.783	Paramormyrops_kingsleyae
ENSELUG00000016022	shrprbck1r	100	76.462	ENSPKIG00000006933	shrprbck1r	100	76.748	Paramormyrops_kingsleyae
ENSELUG00000016022	shrprbck1r	100	71.915	ENSPMGG00000013254	shrprbck1r	100	71.915	Periophthalmus_magnuspinnatus
ENSELUG00000016022	shrprbck1r	59	57.452	ENSPFOG00000015253	sharpin	95	57.452	Poecilia_formosa
ENSELUG00000016022	shrprbck1r	100	71.329	ENSPFOG00000004214	shrprbck1r	100	71.329	Poecilia_formosa
ENSELUG00000016022	shrprbck1r	59	57.692	ENSPLAG00000000423	sharpin	95	57.692	Poecilia_latipinna
ENSELUG00000016022	shrprbck1r	100	71.189	ENSPLAG00000020523	shrprbck1r	100	71.189	Poecilia_latipinna
ENSELUG00000016022	shrprbck1r	100	71.469	ENSPMEG00000006877	shrprbck1r	100	71.469	Poecilia_mexicana
ENSELUG00000016022	shrprbck1r	59	57.452	ENSPREG00000009702	sharpin	95	57.452	Poecilia_reticulata
ENSELUG00000016022	shrprbck1r	100	71.049	ENSPREG00000014689	shrprbck1r	100	71.049	Poecilia_reticulata
ENSELUG00000016022	shrprbck1r	100	75.419	ENSPNYG00000022601	shrprbck1r	100	75.419	Pundamilia_nyererei
ENSELUG00000016022	shrprbck1r	100	72.138	ENSPNAG00000007847	shrprbck1r	100	72.055	Pygocentrus_nattereri
ENSELUG00000016022	shrprbck1r	55	54.707	ENSPNAG00000002911	sharpin	99	55.076	Pygocentrus_nattereri
ENSELUG00000016022	shrprbck1r	94	79.024	ENSSFOG00015014150	-	90	79.024	Scleropages_formosus
ENSELUG00000016022	shrprbck1r	62	54.886	ENSSFOG00015004028	sharpin	99	55.488	Scleropages_formosus
ENSELUG00000016022	shrprbck1r	100	71.879	ENSSMAG00000018085	shrprbck1r	100	71.879	Scophthalmus_maximus
ENSELUG00000016022	shrprbck1r	100	76.503	ENSSDUG00000002959	shrprbck1r	100	76.676	Seriola_dumerili
ENSELUG00000016022	shrprbck1r	60	48.122	ENSSDUG00000019039	sharpin	96	48.122	Seriola_dumerili
ENSELUG00000016022	shrprbck1r	100	76.676	ENSSLDG00000009026	shrprbck1r	100	76.816	Seriola_lalandi_dorsalis
ENSELUG00000016022	shrprbck1r	96	75.540	ENSSPAG00000016097	shrprbck1r	98	75.327	Stegastes_partitus
ENSELUG00000016022	shrprbck1r	59	54.436	ENSTRUG00000011046	sharpin	96	54.808	Takifugu_rubripes
ENSELUG00000016022	shrprbck1r	88	87.692	ENSTRUG00000006949	shrprbck1r	100	71.151	Takifugu_rubripes
ENSELUG00000016022	shrprbck1r	55	59.494	ENSTNIG00000008521	sharpin	94	59.194	Tetraodon_nigroviridis
ENSELUG00000016022	shrprbck1r	59	45.036	ENSXCOG00000015019	sharpin	96	45.521	Xiphophorus_couchianus
ENSELUG00000016022	shrprbck1r	100	69.371	ENSXCOG00000006701	shrprbck1r	100	69.371	Xiphophorus_couchianus
ENSELUG00000016022	shrprbck1r	59	58.313	ENSXMAG00000022076	sharpin	95	58.313	Xiphophorus_maculatus
ENSELUG00000016022	shrprbck1r	100	69.510	ENSXMAG00000018972	shrprbck1r	100	69.510	Xiphophorus_maculatus