EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016061 (Gene tree)
Gene ID: 105011361
Gene Symbol: taf15
Alias: fa11g05|wu:fa11g05|wu:fc02g02|zgc:158363
Full Name: RNA-binding protein FUS
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15056 bases
Position: chrLG01:7401348-7416403
Accession: 105011361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036680	zf-RanBP	PF00641.18	8.4e-08	1	1
ENSELUP00000016227	zf-RanBP	PF00641.18	9.7e-08	1	1
ENSELUP00000016234	zf-RanBP	PF00641.18	1e-07	1	1
ENSELUP00000036680	RRM_1	PF00076.22	6.4e-11	1	1
ENSELUP00000016227	RRM_1	PF00076.22	6.7e-11	1	1
ENSELUP00000016234	RRM_1	PF00076.22	8.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025517	-	2545	XM_010871339	ENSELUP00000016234	439 (aa)	XP_010869641	UPI000575F4A1
ENSELUT00000025532	-	3461	-	ENSELUP00000016227	410 (aa)	-	-
ENSELUT00000025509	-	3298	-	ENSELUP00000036680	395 (aa)	-	-

Gene Model

Click here to download ENSELUG00000016061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016061	taf15	60	53.710	ENSELUG00000022983	-	57	46.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016061	taf15	71	63.924	ENSAMXG00000013126	taf15	96	59.848	Astyanax_mexicanus
ENSELUG00000016061	taf15	50	75.845	ENSCVAG00000008349	taf15	69	53.582	Cyprinodon_variegatus
ENSELUG00000016061	taf15	51	64.435	ENSGAFG00000007198	taf15	69	52.874	Gambusia_affinis
ENSELUG00000016061	taf15	84	51.979	ENSHBUG00000015178	taf15	74	53.369	Haplochromis_burtoni
ENSELUG00000016061	taf15	52	78.241	ENSMAMG00000005819	taf15	59	65.201	Mastacembelus_armatus
ENSELUG00000016061	taf15	55	72.685	ENSMZEG00005007852	taf15	81	53.279	Maylandia_zebra
ENSELUG00000016061	taf15	82	54.294	ENSMALG00000002832	taf15	84	54.076	Monopterus_albus
ENSELUG00000016061	taf15	84	61.376	ENSPNAG00000001144	taf15	84	61.600	Pygocentrus_nattereri
ENSELUG00000016061	taf15	84	58.505	ENSSFOG00015004010	-	84	52.972	Scleropages_formosus
ENSELUG00000016061	taf15	67	64.419	ENSXCOG00000012853	taf15	51	80.982	Xiphophorus_couchianus