EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000016199 (Gene tree)
Gene ID: 105028849
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 8648 bases
Position: chrLG17:2486134-2494781
Accession: 105028849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036804	NOB1_Zn_bind	PF08772.11	3.9e-31	1	1
ENSELUP00000016373	NOB1_Zn_bind	PF08772.11	8.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025685	-	1323	-	ENSELUP00000016373	440 (aa)	-	-
ENSELUT00000025721	-	6126	XM_010901872	ENSELUP00000036804	468 (aa)	XP_010900174	-

Gene Model

Click here to download ENSELUG00000016199's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016199	nob1	99	57.931	ENSG00000141101	NOB1	94	72.581	Homo_sapiens
ENSELUG00000016199	nob1	100	56.885	ENSAPOG00000008241	nob1	100	57.883	Acanthochromis_polyacanthus
ENSELUG00000016199	nob1	99	58.837	ENSAMEG00000006706	NOB1	99	61.074	Ailuropoda_melanoleuca
ENSELUG00000016199	nob1	99	65.393	ENSACIG00000001503	nob1	100	66.517	Amphilophus_citrinellus
ENSELUG00000016199	nob1	95	67.117	ENSAOCG00000006533	nob1	100	66.441	Amphiprion_ocellaris
ENSELUG00000016199	nob1	100	63.864	ENSAPEG00000000032	-	100	66.892	Amphiprion_percula
ENSELUG00000016199	nob1	100	64.091	ENSAPEG00000000029	nob1	100	67.117	Amphiprion_percula
ENSELUG00000016199	nob1	100	63.864	ENSATEG00000014585	nob1	100	65.090	Anabas_testudineus
ENSELUG00000016199	nob1	98	57.968	ENSACAG00000003697	NOB1	88	60.000	Anolis_carolinensis
ENSELUG00000016199	nob1	99	58.314	ENSANAG00000036611	NOB1	99	61.136	Aotus_nancymaae
ENSELUG00000016199	nob1	100	66.368	ENSACLG00000024897	nob1	100	67.478	Astatotilapia_calliptera
ENSELUG00000016199	nob1	90	66.125	ENSAMXG00000003642	nob1	100	67.517	Astyanax_mexicanus
ENSELUG00000016199	nob1	99	57.978	ENSBTAG00000020633	NOB1	99	61.048	Bos_taurus
ENSELUG00000016199	nob1	72	40.000	WBGene00021843	Y54E10BR.4	93	38.153	Caenorhabditis_elegans
ENSELUG00000016199	nob1	99	57.494	ENSCJAG00000015230	NOB1	99	61.503	Callithrix_jacchus
ENSELUG00000016199	nob1	99	59.268	ENSCAFG00000020251	NOB1	99	61.678	Canis_familiaris
ENSELUG00000016199	nob1	99	59.268	ENSCAFG00020020297	NOB1	99	61.678	Canis_lupus_dingo
ENSELUG00000016199	nob1	99	58.851	ENSCHIG00000027022	NOB1	99	60.771	Capra_hircus
ENSELUG00000016199	nob1	99	59.725	ENSTSYG00000003084	NOB1	99	61.276	Carlito_syrichta
ENSELUG00000016199	nob1	80	57.937	ENSCAPG00000015542	NOB1	100	59.894	Cavia_aperea
ENSELUG00000016199	nob1	94	59.637	ENSCPOG00000022538	NOB1	99	61.312	Cavia_porcellus
ENSELUG00000016199	nob1	99	58.108	ENSCCAG00000023773	NOB1	99	61.731	Cebus_capucinus
ENSELUG00000016199	nob1	99	57.666	ENSCATG00000039487	NOB1	99	61.048	Cercocebus_atys
ENSELUG00000016199	nob1	80	55.820	ENSCLAG00000005926	NOB1	100	57.029	Chinchilla_lanigera
ENSELUG00000016199	nob1	99	57.895	ENSCSAG00000004158	NOB1	99	59.009	Chlorocebus_sabaeus
ENSELUG00000016199	nob1	99	52.477	ENSCHOG00000011047	NOB1	99	55.305	Choloepus_hoffmanni
ENSELUG00000016199	nob1	99	60.085	ENSCPBG00000027035	NOB1	98	59.236	Chrysemys_picta_bellii
ENSELUG00000016199	nob1	99	43.311	ENSCING00000023441	-	100	43.243	Ciona_intestinalis
ENSELUG00000016199	nob1	99	43.243	ENSCSAVG00000009081	-	99	43.341	Ciona_savignyi
ENSELUG00000016199	nob1	99	58.770	ENSCGRG00001009255	Nob1	96	59.778	Cricetulus_griseus_chok1gshd
ENSELUG00000016199	nob1	99	59.080	ENSCGRG00000010869	Nob1	99	60.682	Cricetulus_griseus_crigri
ENSELUG00000016199	nob1	88	61.519	ENSCSEG00000019657	nob1	93	60.891	Cynoglossus_semilaevis
ENSELUG00000016199	nob1	99	65.179	ENSDARG00000016080	nob1	99	68.080	Danio_rerio
ENSELUG00000016199	nob1	99	57.399	ENSDNOG00000041643	NOB1	99	59.864	Dasypus_novemcinctus
ENSELUG00000016199	nob1	99	58.486	ENSDORG00000000483	Nob1	99	59.502	Dipodomys_ordii
ENSELUG00000016199	nob1	71	49.153	FBgn0030177	CG2972	93	38.307	Drosophila_melanogaster
ENSELUG00000016199	nob1	62	47.794	ENSETEG00000000011	-	59	48.201	Echinops_telfairi
ENSELUG00000016199	nob1	98	42.451	ENSEBUG00000004464	nob1	98	45.022	Eptatretus_burgeri
ENSELUG00000016199	nob1	99	57.658	ENSEASG00005021356	NOB1	83	60.271	Equus_asinus_asinus
ENSELUG00000016199	nob1	99	57.883	ENSECAG00000023748	NOB1	80	60.271	Equus_caballus
ENSELUG00000016199	nob1	66	49.359	ENSEEUG00000014384	NOB1	66	48.254	Erinaceus_europaeus
ENSELUG00000016199	nob1	99	59.417	ENSFCAG00000002958	NOB1	99	61.678	Felis_catus
ENSELUG00000016199	nob1	99	58.391	ENSFDAG00000009239	NOB1	99	60.633	Fukomys_damarensis
ENSELUG00000016199	nob1	52	64.898	ENSFHEG00000007657	nob1	68	61.429	Fundulus_heteroclitus
ENSELUG00000016199	nob1	95	70.203	ENSGMOG00000010638	nob1	100	70.203	Gadus_morhua
ENSELUG00000016199	nob1	99	53.741	ENSGALG00000000693	NOB1	99	56.335	Gallus_gallus
ENSELUG00000016199	nob1	95	59.698	ENSGAFG00000006104	nob1	100	57.500	Gambusia_affinis
ENSELUG00000016199	nob1	99	63.014	ENSGACG00000017552	nob1	99	66.742	Gasterosteus_aculeatus
ENSELUG00000016199	nob1	99	59.268	ENSGAGG00000003902	NOB1	99	61.712	Gopherus_agassizii
ENSELUG00000016199	nob1	99	58.391	ENSGGOG00000025456	NOB1	99	62.273	Gorilla_gorilla
ENSELUG00000016199	nob1	100	65.682	ENSHBUG00000002580	nob1	100	68.243	Haplochromis_burtoni
ENSELUG00000016199	nob1	99	57.658	ENSHGLG00000014260	NOB1	99	60.181	Heterocephalus_glaber_female
ENSELUG00000016199	nob1	99	57.658	ENSHGLG00100013978	NOB1	99	60.181	Heterocephalus_glaber_male
ENSELUG00000016199	nob1	99	57.718	ENSHCOG00000006699	nob1	100	59.551	Hippocampus_comes
ENSELUG00000016199	nob1	100	57.819	ENSIPUG00000007579	nob1	100	58.517	Ictalurus_punctatus
ENSELUG00000016199	nob1	99	59.039	ENSSTOG00000001204	NOB1	99	60.227	Ictidomys_tridecemlineatus
ENSELUG00000016199	nob1	99	57.143	ENSJJAG00000015543	Nob1	99	59.637	Jaculus_jaculus
ENSELUG00000016199	nob1	100	63.657	ENSKMAG00000018220	nob1	100	66.517	Kryptolebias_marmoratus
ENSELUG00000016199	nob1	95	69.369	ENSLBEG00000026375	nob1	100	68.468	Labrus_bergylta
ENSELUG00000016199	nob1	100	62.281	ENSLACG00000006973	NOB1	100	64.163	Latimeria_chalumnae
ENSELUG00000016199	nob1	100	61.926	ENSLOCG00000001411	nob1	99	65.487	Lepisosteus_oculatus
ENSELUG00000016199	nob1	94	60.899	ENSLAFG00000008978	NOB1	99	59.326	Loxodonta_africana
ENSELUG00000016199	nob1	99	57.895	ENSMFAG00000030131	NOB1	99	59.681	Macaca_fascicularis
ENSELUG00000016199	nob1	99	57.895	ENSMMUG00000006506	NOB1	99	61.048	Macaca_mulatta
ENSELUG00000016199	nob1	99	57.666	ENSMNEG00000028829	NOB1	99	56.036	Macaca_nemestrina
ENSELUG00000016199	nob1	99	57.666	ENSMLEG00000032913	NOB1	99	60.948	Mandrillus_leucophaeus
ENSELUG00000016199	nob1	100	65.455	ENSMZEG00005028346	nob1	100	67.793	Maylandia_zebra
ENSELUG00000016199	nob1	66	62.939	ENSMZEG00005003827	-	90	63.259	Maylandia_zebra
ENSELUG00000016199	nob1	60	60.563	ENSMGAG00000008675	NOB1	100	58.451	Meleagris_gallopavo
ENSELUG00000016199	nob1	99	55.909	ENSMAUG00000013554	Nob1	99	58.409	Mesocricetus_auratus
ENSELUG00000016199	nob1	99	57.241	ENSMICG00000012123	NOB1	99	59.637	Microcebus_murinus
ENSELUG00000016199	nob1	99	58.636	ENSMOCG00000010370	Nob1	99	60.820	Microtus_ochrogaster
ENSELUG00000016199	nob1	100	64.798	ENSMMOG00000002120	nob1	100	66.067	Mola_mola
ENSELUG00000016199	nob1	99	59.459	ENSMODG00000002677	NOB1	99	61.607	Monodelphis_domestica
ENSELUG00000016199	nob1	99	62.329	ENSMALG00000014580	nob1	99	66.516	Monopterus_albus
ENSELUG00000016199	nob1	99	59.310	MGP_CAROLIEiJ_G0031536	Nob1	97	60.364	Mus_caroli
ENSELUG00000016199	nob1	99	59.540	ENSMUSG00000003848	Nob1	99	60.592	Mus_musculus
ENSELUG00000016199	nob1	99	58.716	MGP_PahariEiJ_G0023136	Nob1	99	60.227	Mus_pahari
ENSELUG00000016199	nob1	99	59.174	MGP_SPRETEiJ_G0032654	Nob1	97	60.364	Mus_spretus
ENSELUG00000016199	nob1	99	58.686	ENSMPUG00000007483	NOB1	98	58.017	Mustela_putorius_furo
ENSELUG00000016199	nob1	99	57.111	ENSMLUG00000006667	NOB1	99	61.818	Myotis_lucifugus
ENSELUG00000016199	nob1	99	57.955	ENSNGAG00000008627	Nob1	99	60.181	Nannospalax_galili
ENSELUG00000016199	nob1	99	57.718	ENSNLEG00000005572	NOB1	99	62.273	Nomascus_leucogenys
ENSELUG00000016199	nob1	75	59.259	ENSOPRG00000006721	NOB1	99	59.544	Ochotona_princeps
ENSELUG00000016199	nob1	99	57.437	ENSODEG00000014376	NOB1	99	60.497	Octodon_degus
ENSELUG00000016199	nob1	99	65.778	ENSONIG00000003319	nob1	99	69.575	Oreochromis_niloticus
ENSELUG00000016199	nob1	85	57.909	ENSOCUG00000004400	NOB1	100	60.686	Oryctolagus_cuniculus
ENSELUG00000016199	nob1	100	61.261	ENSORLG00000018862	nob1	100	62.838	Oryzias_latipes
ENSELUG00000016199	nob1	100	62.500	ENSORLG00020014687	nob1	100	63.739	Oryzias_latipes_hni
ENSELUG00000016199	nob1	100	60.811	ENSORLG00015012156	nob1	100	62.387	Oryzias_latipes_hsok
ENSELUG00000016199	nob1	100	57.717	ENSOMEG00000022722	nob1	100	59.623	Oryzias_melastigma
ENSELUG00000016199	nob1	99	53.675	ENSOGAG00000004590	NOB1	99	56.885	Otolemur_garnettii
ENSELUG00000016199	nob1	99	58.333	ENSOARG00000003606	NOB1	99	59.594	Ovis_aries
ENSELUG00000016199	nob1	97	54.206	ENSPPAG00000003317	-	100	54.503	Pan_paniscus
ENSELUG00000016199	nob1	99	57.931	ENSPPAG00000040257	NOB1	99	61.818	Pan_paniscus
ENSELUG00000016199	nob1	99	58.465	ENSPPRG00000016949	NOB1	99	61.224	Panthera_pardus
ENSELUG00000016199	nob1	99	58.581	ENSPTIG00000011234	NOB1	99	61.224	Panthera_tigris_altaica
ENSELUG00000016199	nob1	99	57.931	ENSPTRG00000008285	NOB1	99	61.400	Pan_troglodytes
ENSELUG00000016199	nob1	99	58.447	ENSPANG00000015858	NOB1	99	60.948	Papio_anubis
ENSELUG00000016199	nob1	100	64.932	ENSPKIG00000020293	nob1	100	67.568	Paramormyrops_kingsleyae
ENSELUG00000016199	nob1	99	56.881	ENSPSIG00000012477	NOB1	99	58.730	Pelodiscus_sinensis
ENSELUG00000016199	nob1	99	58.447	ENSPEMG00000010995	Nob1	99	60.497	Peromyscus_maniculatus_bairdii
ENSELUG00000016199	nob1	85	57.407	ENSPFOG00000000027	nob1	100	61.140	Poecilia_formosa
ENSELUG00000016199	nob1	60	62.857	ENSPLAG00000011546	nob1	92	61.348	Poecilia_latipinna
ENSELUG00000016199	nob1	100	57.727	ENSPMEG00000023435	nob1	100	59.534	Poecilia_mexicana
ENSELUG00000016199	nob1	99	56.025	ENSPREG00000007675	nob1	99	59.574	Poecilia_reticulata
ENSELUG00000016199	nob1	99	57.942	ENSPPYG00000007509	NOB1	99	60.455	Pongo_abelii
ENSELUG00000016199	nob1	99	58.161	ENSPCAG00000001527	NOB1	99	58.503	Procavia_capensis
ENSELUG00000016199	nob1	99	58.409	ENSPCOG00000025515	NOB1	99	60.317	Propithecus_coquereli
ENSELUG00000016199	nob1	79	38.920	ENSPVAG00000013330	NOB1	78	41.360	Pteropus_vampyrus
ENSELUG00000016199	nob1	100	66.071	ENSPNYG00000018449	nob1	100	69.488	Pundamilia_nyererei
ENSELUG00000016199	nob1	100	61.758	ENSPNAG00000004244	nob1	99	65.625	Pygocentrus_nattereri
ENSELUG00000016199	nob1	94	61.959	ENSRNOG00000021890	Nob1	99	61.048	Rattus_norvegicus
ENSELUG00000016199	nob1	99	57.241	ENSRBIG00000019599	NOB1	99	61.364	Rhinopithecus_bieti
ENSELUG00000016199	nob1	99	57.241	ENSRROG00000033419	NOB1	99	61.364	Rhinopithecus_roxellana
ENSELUG00000016199	nob1	65	34.862	YOR056C	NOB1	66	38.889	Saccharomyces_cerevisiae
ENSELUG00000016199	nob1	90	53.904	ENSSBOG00000029042	NOB1	94	57.606	Saimiri_boliviensis_boliviensis
ENSELUG00000016199	nob1	99	58.542	ENSSHAG00000015387	NOB1	99	61.503	Sarcophilus_harrisii
ENSELUG00000016199	nob1	100	67.043	ENSSFOG00015008503	nob1	100	71.011	Scleropages_formosus
ENSELUG00000016199	nob1	100	65.455	ENSSMAG00000003064	nob1	100	67.342	Scophthalmus_maximus
ENSELUG00000016199	nob1	100	64.798	ENSSDUG00000007307	nob1	100	66.966	Seriola_dumerili
ENSELUG00000016199	nob1	65	78.182	ENSSLDG00000011459	-	94	82.558	Seriola_lalandi_dorsalis
ENSELUG00000016199	nob1	84	57.761	ENSSPUG00000005621	NOB1	99	58.289	Sphenodon_punctatus
ENSELUG00000016199	nob1	100	64.318	ENSSPAG00000022362	nob1	100	66.892	Stegastes_partitus
ENSELUG00000016199	nob1	99	59.184	ENSSSCG00000002753	NOB1	99	61.678	Sus_scrofa
ENSELUG00000016199	nob1	93	81.618	ENSTRUG00000023145	nob1	99	66.447	Takifugu_rubripes
ENSELUG00000016199	nob1	93	81.618	ENSTRUG00000004780	nob1	99	66.447	Takifugu_rubripes
ENSELUG00000016199	nob1	99	59.865	ENSTNIG00000002552	nob1	99	63.431	Tetraodon_nigroviridis
ENSELUG00000016199	nob1	59	52.669	ENSTBEG00000000690	NOB1	52	52.313	Tupaia_belangeri
ENSELUG00000016199	nob1	58	60.806	ENSUAMG00000028135	NOB1	99	59.341	Ursus_americanus
ENSELUG00000016199	nob1	97	60.526	ENSUMAG00000018658	NOB1	97	59.649	Ursus_maritimus
ENSELUG00000016199	nob1	99	59.174	ENSVVUG00000017271	NOB1	99	61.451	Vulpes_vulpes
ENSELUG00000016199	nob1	100	57.906	ENSXETG00000017874	nob1	99	60.360	Xenopus_tropicalis
ENSELUG00000016199	nob1	85	57.219	ENSXCOG00000009734	nob1	100	58.466	Xiphophorus_couchianus
ENSELUG00000016199	nob1	100	58.182	ENSXMAG00000017371	nob1	100	59.333	Xiphophorus_maculatus