EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016238 (Gene tree)
Gene ID: 105031096
Gene Symbol: -
Alias: -
Full Name: nuclear GTPase SLIP-GC
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 73469 bases
Position: chrLG11:30460344-30533812
Accession: 105031096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036779	MMR_HSR1	PF01926.23	6.9e-06	1	1
ENSELUP00000016424	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSELUP00000016441	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039774	-	7099	-	ENSELUP00000016441	913 (aa)	-	-
ENSELUT00000025756	-	6996	XM_010905318	ENSELUP00000016424	1025 (aa)	XP_010903620	UPI0005773990
ENSELUT00000025762	-	6904	-	ENSELUP00000016411	848 (aa)	-	-
ENSELUT00000025703	-	6474	-	ENSELUP00000036779	851 (aa)	-	UPI00057623BC

Gene Model

Click here to download ENSELUG00000016238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016238	-	90	76.406	ENSELUG00000016154	-	96	76.528
ENSELUG00000016238	-	85	61.692	ENSELUG00000016324	-	99	59.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016238	-	81	42.062	ENSAPEG00000008962	-	96	41.637	Amphiprion_percula
ENSELUG00000016238	-	81	41.913	ENSAPEG00000007405	-	96	41.489	Amphiprion_percula
ENSELUG00000016238	-	75	43.817	ENSAPEG00000007463	-	99	44.212	Amphiprion_percula
ENSELUG00000016238	-	71	46.809	ENSATEG00000024350	-	95	47.005	Anabas_testudineus
ENSELUG00000016238	-	71	42.161	ENSACLG00000027749	-	95	41.857	Astatotilapia_calliptera
ENSELUG00000016238	-	82	43.906	ENSACLG00000027743	-	97	46.939	Astatotilapia_calliptera
ENSELUG00000016238	-	68	43.860	ENSACLG00000027785	-	97	44.505	Astatotilapia_calliptera
ENSELUG00000016238	-	81	40.566	ENSACLG00000027781	-	95	40.728	Astatotilapia_calliptera
ENSELUG00000016238	-	59	44.752	ENSACLG00000009378	-	96	44.752	Astatotilapia_calliptera
ENSELUG00000016238	-	78	43.639	ENSACLG00000027763	-	91	43.681	Astatotilapia_calliptera
ENSELUG00000016238	-	82	43.758	ENSACLG00000027770	-	96	43.372	Astatotilapia_calliptera
ENSELUG00000016238	-	77	39.569	ENSAMXG00000007315	-	96	39.569	Astyanax_mexicanus
ENSELUG00000016238	-	72	41.084	ENSAMXG00000035650	-	97	41.084	Astyanax_mexicanus
ENSELUG00000016238	-	66	30.469	ENSCAPG00000010505	NUGGC	85	30.000	Cavia_aperea
ENSELUG00000016238	-	69	30.015	ENSCATG00000011556	NUGGC	51	31.905	Cercocebus_atys
ENSELUG00000016238	-	66	30.475	ENSFCAG00000002892	NUGGC	51	31.265	Felis_catus
ENSELUG00000016238	-	75	43.827	ENSGACG00000011412	-	99	43.266	Gasterosteus_aculeatus
ENSELUG00000016238	-	64	48.067	ENSLBEG00000025738	-	98	47.148	Labrus_bergylta
ENSELUG00000016238	-	69	43.582	ENSLBEG00000027088	-	97	43.433	Labrus_bergylta
ENSELUG00000016238	-	71	34.503	ENSLOCG00000002868	-	98	34.265	Lepisosteus_oculatus
ENSELUG00000016238	-	69	30.307	ENSMFAG00000043857	NUGGC	51	31.905	Macaca_fascicularis
ENSELUG00000016238	-	69	30.307	ENSMMUG00000001040	NUGGC	51	31.905	Macaca_mulatta
ENSELUG00000016238	-	69	30.454	ENSMNEG00000045452	NUGGC	51	31.905	Macaca_nemestrina
ENSELUG00000016238	-	69	44.514	ENSMZEG00005023437	-	94	44.828	Maylandia_zebra
ENSELUG00000016238	-	81	43.101	ENSMZEG00005023434	-	86	43.122	Maylandia_zebra
ENSELUG00000016238	-	72	44.578	ENSMZEG00005026592	-	97	44.495	Maylandia_zebra
ENSELUG00000016238	-	77	42.797	ENSMZEG00005004202	-	92	43.722	Maylandia_zebra
ENSELUG00000016238	-	84	43.021	ENSMZEG00005004230	-	96	43.037	Maylandia_zebra
ENSELUG00000016238	-	82	44.241	ENSMZEG00005023374	-	96	46.939	Maylandia_zebra
ENSELUG00000016238	-	81	39.260	ENSMZEG00005023384	-	95	38.902	Maylandia_zebra
ENSELUG00000016238	-	60	34.894	ENSMAUG00000014486	Nuggc	76	34.894	Mesocricetus_auratus
ENSELUG00000016238	-	66	30.448	MGP_CAROLIEiJ_G0019426	Nuggc	79	30.016	Mus_caroli
ENSELUG00000016238	-	83	38.766	ENSONIG00000005156	-	100	44.516	Oreochromis_niloticus
ENSELUG00000016238	-	65	40.469	ENSONIG00000015367	-	99	40.219	Oreochromis_niloticus
ENSELUG00000016238	-	64	38.951	ENSONIG00000012332	-	99	38.951	Oreochromis_niloticus
ENSELUG00000016238	-	67	43.987	ENSONIG00000017112	-	98	44.146	Oreochromis_niloticus
ENSELUG00000016238	-	65	31.318	ENSOGAG00000000229	NUGGC	80	30.171	Otolemur_garnettii
ENSELUG00000016238	-	81	41.400	ENSPFOG00000006073	-	97	41.637	Poecilia_formosa
ENSELUG00000016238	-	77	44.206	ENSPLAG00000016480	-	98	44.300	Poecilia_latipinna
ENSELUG00000016238	-	70	44.242	ENSPMEG00000014636	-	98	44.427	Poecilia_mexicana
ENSELUG00000016238	-	79	41.607	ENSPREG00000009634	-	99	43.466	Poecilia_reticulata
ENSELUG00000016238	-	60	49.288	ENSPREG00000007347	-	96	49.288	Poecilia_reticulata
ENSELUG00000016238	-	78	43.207	ENSPNYG00000002532	-	91	43.228	Pundamilia_nyererei
ENSELUG00000016238	-	76	40.353	ENSPNAG00000003204	-	97	39.566	Pygocentrus_nattereri
ENSELUG00000016238	-	63	42.424	ENSRBIG00000043902	NUGGC	81	42.424	Rhinopithecus_bieti
ENSELUG00000016238	-	63	41.791	ENSSBOG00000028930	NUGGC	81	41.791	Saimiri_boliviensis_boliviensis
ENSELUG00000016238	-	74	33.836	ENSSFOG00015023994	-	73	33.761	Scleropages_formosus
ENSELUG00000016238	-	72	49.031	ENSSMAG00000015947	nuggc.3	96	43.808	Scophthalmus_maximus
ENSELUG00000016238	-	75	41.765	ENSSDUG00000010293	-	99	41.176	Seriola_dumerili
ENSELUG00000016238	-	77	43.050	ENSSPAG00000013498	-	97	43.185	Stegastes_partitus
ENSELUG00000016238	-	79	43.923	ENSSPAG00000014020	-	99	43.426	Stegastes_partitus