EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016299 (Gene tree)
Gene ID: 105025741
Gene Symbol: LSM14B (1 of many)
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 5215 bases
Position: chrLG12:29609473-29614687
Accession: 105025741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000016523	FDF	PF09532.10	1.1e-18	1	1
ENSELUP00000016523	LSM14	PF12701.7	5.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025890	LSM14B (1 of many)-201	3262	XM_010896669	ENSELUP00000016523	377 (aa)	XP_010894971	UPI0005762B6E

Gene Model

Click here to download ENSELUG00000016299's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016299's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016299	LSM14B	99	57.106	ENSELUG00000005780	lsm14b	91	57.507
ENSELUG00000016299	LSM14B	91	41.584	ENSELUG00000007050	lsm14ab	85	44.041
ENSELUG00000016299	LSM14B	91	37.629	ENSELUG00000018038	lsm14aa	85	41.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016299	LSM14B	99	53.197	ENSG00000149657	LSM14B	100	53.299	Homo_sapiens
ENSELUG00000016299	LSM14B	90	51.744	ENSAPOG00000001780	lsm14b	90	51.744	Acanthochromis_polyacanthus
ENSELUG00000016299	LSM14B	99	49.537	ENSAMEG00000013430	LSM14B	91	48.608	Ailuropoda_melanoleuca
ENSELUG00000016299	LSM14B	91	51.163	ENSACIG00000012266	lsm14b	90	51.453	Amphilophus_citrinellus
ENSELUG00000016299	LSM14B	62	42.276	ENSACIG00000003147	LSM14B	87	42.500	Amphilophus_citrinellus
ENSELUG00000016299	LSM14B	90	51.744	ENSAOCG00000012380	lsm14b	90	51.744	Amphiprion_ocellaris
ENSELUG00000016299	LSM14B	100	54.987	ENSAOCG00000006667	LSM14B	100	54.897	Amphiprion_ocellaris
ENSELUG00000016299	LSM14B	90	50.000	ENSAPEG00000023633	lsm14b	89	50.292	Amphiprion_percula
ENSELUG00000016299	LSM14B	90	53.488	ENSATEG00000016603	lsm14b	90	53.198	Anabas_testudineus
ENSELUG00000016299	LSM14B	68	48.084	ENSATEG00000015895	LSM14B	82	47.893	Anabas_testudineus
ENSELUG00000016299	LSM14B	92	47.395	ENSAPLG00000013203	LSM14B	91	46.175	Anas_platyrhynchos
ENSELUG00000016299	LSM14B	92	50.398	ENSACAG00000016195	LSM14B	90	52.941	Anolis_carolinensis
ENSELUG00000016299	LSM14B	99	52.806	ENSANAG00000037915	LSM14B	100	52.911	Aotus_nancymaae
ENSELUG00000016299	LSM14B	90	53.314	ENSACLG00000019663	lsm14b	90	53.602	Astatotilapia_calliptera
ENSELUG00000016299	LSM14B	100	61.307	ENSAMXG00000002865	lsm14b	100	62.814	Astyanax_mexicanus
ENSELUG00000016299	LSM14B	99	49.070	ENSBTAG00000021558	LSM14B	91	47.980	Bos_taurus
ENSELUG00000016299	LSM14B	99	52.174	ENSCJAG00000014434	LSM14B	100	52.284	Callithrix_jacchus
ENSELUG00000016299	LSM14B	90	46.819	ENSCAFG00000012518	LSM14B	89	45.506	Canis_familiaris
ENSELUG00000016299	LSM14B	99	54.220	ENSCAFG00020022150	LSM14B	90	53.782	Canis_lupus_dingo
ENSELUG00000016299	LSM14B	99	53.708	ENSCHIG00000010284	-	90	53.221	Capra_hircus
ENSELUG00000016299	LSM14B	99	41.191	ENSCHIG00000022681	-	90	41.737	Capra_hircus
ENSELUG00000016299	LSM14B	89	51.397	ENSTSYG00000031914	LSM14B	94	42.079	Carlito_syrichta
ENSELUG00000016299	LSM14B	89	51.420	ENSCAPG00000013059	LSM14B	100	51.420	Cavia_aperea
ENSELUG00000016299	LSM14B	89	51.567	ENSCPOG00000038080	LSM14B	100	51.567	Cavia_porcellus
ENSELUG00000016299	LSM14B	99	52.174	ENSCCAG00000021267	LSM14B	100	52.284	Cebus_capucinus
ENSELUG00000016299	LSM14B	92	37.709	ENSCCAG00000024900	-	75	36.639	Cebus_capucinus
ENSELUG00000016299	LSM14B	99	53.197	ENSCATG00000036006	LSM14B	100	53.299	Cercocebus_atys
ENSELUG00000016299	LSM14B	89	50.712	ENSCLAG00000003186	LSM14B	100	50.712	Chinchilla_lanigera
ENSELUG00000016299	LSM14B	99	48.372	ENSCSAG00000015729	LSM14B	91	47.475	Chlorocebus_sabaeus
ENSELUG00000016299	LSM14B	68	37.778	ENSCHOG00000006997	-	100	39.416	Choloepus_hoffmanni
ENSELUG00000016299	LSM14B	100	49.884	ENSCPBG00000027065	LSM14B	91	48.985	Chrysemys_picta_bellii
ENSELUG00000016299	LSM14B	89	50.427	ENSCANG00000036986	LSM14B	100	50.427	Colobus_angolensis_palliatus
ENSELUG00000016299	LSM14B	99	53.418	ENSCGRG00001018399	Lsm14b	90	52.909	Cricetulus_griseus_chok1gshd
ENSELUG00000016299	LSM14B	61	40.210	ENSCGRG00000006111	-	90	39.502	Cricetulus_griseus_crigri
ENSELUG00000016299	LSM14B	62	41.736	ENSCGRG00000002484	-	96	43.033	Cricetulus_griseus_crigri
ENSELUG00000016299	LSM14B	90	49.859	ENSCSEG00000004722	lsm14b	90	49.859	Cynoglossus_semilaevis
ENSELUG00000016299	LSM14B	97	50.130	ENSCSEG00000020669	LSM14B	91	50.413	Cynoglossus_semilaevis
ENSELUG00000016299	LSM14B	65	43.137	ENSCVAG00000012433	-	87	41.525	Cyprinodon_variegatus
ENSELUG00000016299	LSM14B	92	56.704	ENSDARG00000025386	lsm14b	91	57.627	Danio_rerio
ENSELUG00000016299	LSM14B	69	43.312	ENSDNOG00000025246	LSM14B	100	43.631	Dasypus_novemcinctus
ENSELUG00000016299	LSM14B	92	49.584	ENSDORG00000016683	Lsm14b	79	48.457	Dipodomys_ordii
ENSELUG00000016299	LSM14B	56	43.049	ENSETEG00000011188	-	93	43.049	Echinops_telfairi
ENSELUG00000016299	LSM14B	92	45.580	ENSETEG00000001869	-	89	44.986	Echinops_telfairi
ENSELUG00000016299	LSM14B	69	45.788	ENSEASG00005023218	LSM14B	100	45.788	Equus_asinus_asinus
ENSELUG00000016299	LSM14B	99	53.964	ENSECAG00000010659	LSM14B	90	53.221	Equus_caballus
ENSELUG00000016299	LSM14B	50	63.636	ENSEEUG00000007331	LSM14B	77	63.636	Erinaceus_europaeus
ENSELUG00000016299	LSM14B	99	54.220	ENSFCAG00000003248	LSM14B	90	53.782	Felis_catus
ENSELUG00000016299	LSM14B	89	47.607	ENSFALG00000010618	LSM14B	90	46.389	Ficedula_albicollis
ENSELUG00000016299	LSM14B	89	50.142	ENSFDAG00000002214	LSM14B	89	49.045	Fukomys_damarensis
ENSELUG00000016299	LSM14B	91	50.559	ENSFHEG00000006237	lsm14b	90	50.000	Fundulus_heteroclitus
ENSELUG00000016299	LSM14B	81	53.797	ENSFHEG00000003362	LSM14B	84	51.807	Fundulus_heteroclitus
ENSELUG00000016299	LSM14B	99	52.243	ENSGMOG00000017115	lsm14b	89	52.464	Gadus_morhua
ENSELUG00000016299	LSM14B	100	54.591	ENSGALG00000005125	LSM14B	90	54.972	Gallus_gallus
ENSELUG00000016299	LSM14B	66	47.410	ENSGAFG00000013723	LSM14B	85	46.903	Gambusia_affinis
ENSELUG00000016299	LSM14B	99	45.550	ENSGAFG00000020318	lsm14b	90	44.380	Gambusia_affinis
ENSELUG00000016299	LSM14B	99	51.169	ENSGACG00000009973	lsm14b	90	51.714	Gasterosteus_aculeatus
ENSELUG00000016299	LSM14B	63	47.200	ENSGAGG00000004106	LSM14B	78	45.070	Gopherus_agassizii
ENSELUG00000016299	LSM14B	91	49.860	ENSGGOG00000005630	LSM14B	85	48.750	Gorilla_gorilla
ENSELUG00000016299	LSM14B	99	53.197	ENSHGLG00000015055	LSM14B	100	53.299	Heterocephalus_glaber_female
ENSELUG00000016299	LSM14B	89	50.000	ENSHGLG00100015273	LSM14B	100	49.714	Heterocephalus_glaber_male
ENSELUG00000016299	LSM14B	60	40.789	ENSHCOG00000004867	lsm14b	83	40.789	Hippocampus_comes
ENSELUG00000016299	LSM14B	96	55.108	ENSHCOG00000018747	LSM14B	92	54.930	Hippocampus_comes
ENSELUG00000016299	LSM14B	91	58.807	ENSIPUG00000014946	lsm14b	86	58.807	Ictalurus_punctatus
ENSELUG00000016299	LSM14B	89	50.427	ENSSTOG00000020482	LSM14B	100	50.847	Ictidomys_tridecemlineatus
ENSELUG00000016299	LSM14B	99	53.728	ENSJJAG00000012728	Lsm14b	99	53.728	Jaculus_jaculus
ENSELUG00000016299	LSM14B	90	52.907	ENSKMAG00000017524	lsm14b	91	52.907	Kryptolebias_marmoratus
ENSELUG00000016299	LSM14B	52	49.505	ENSKMAG00000012834	-	86	49.490	Kryptolebias_marmoratus
ENSELUG00000016299	LSM14B	69	44.106	ENSLBEG00000007951	LSM14B	85	43.668	Labrus_bergylta
ENSELUG00000016299	LSM14B	89	71.429	ENSLACG00000003849	LSM14B	91	50.378	Latimeria_chalumnae
ENSELUG00000016299	LSM14B	100	57.653	ENSLOCG00000003746	lsm14b	100	57.250	Lepisosteus_oculatus
ENSELUG00000016299	LSM14B	90	48.780	ENSLAFG00000007492	LSM14B	100	51.811	Loxodonta_africana
ENSELUG00000016299	LSM14B	99	53.197	ENSMFAG00000041479	LSM14B	100	53.299	Macaca_fascicularis
ENSELUG00000016299	LSM14B	99	53.197	ENSMMUG00000014084	LSM14B	100	53.299	Macaca_mulatta
ENSELUG00000016299	LSM14B	99	53.197	ENSMNEG00000045573	LSM14B	100	53.299	Macaca_nemestrina
ENSELUG00000016299	LSM14B	89	50.427	ENSMLEG00000040895	LSM14B	89	49.363	Mandrillus_leucophaeus
ENSELUG00000016299	LSM14B	90	52.408	ENSMAMG00000020539	lsm14b	90	52.408	Mastacembelus_armatus
ENSELUG00000016299	LSM14B	100	56.364	ENSMAMG00000024124	LSM14B	91	56.772	Mastacembelus_armatus
ENSELUG00000016299	LSM14B	90	52.738	ENSMZEG00005000987	lsm14b	90	53.026	Maylandia_zebra
ENSELUG00000016299	LSM14B	91	52.089	ENSMZEG00005026001	LSM14B	93	53.693	Maylandia_zebra
ENSELUG00000016299	LSM14B	92	50.407	ENSMGAG00000005300	LSM14B	90	50.000	Meleagris_gallopavo
ENSELUG00000016299	LSM14B	99	53.418	ENSMAUG00000020700	Lsm14b	90	52.793	Mesocricetus_auratus
ENSELUG00000016299	LSM14B	99	53.708	ENSMICG00000014675	LSM14B	90	53.221	Microcebus_murinus
ENSELUG00000016299	LSM14B	99	53.571	ENSMOCG00000020600	Lsm14b	90	53.073	Microtus_ochrogaster
ENSELUG00000016299	LSM14B	53	44.019	ENSMOCG00000005119	-	90	38.722	Microtus_ochrogaster
ENSELUG00000016299	LSM14B	90	49.584	ENSMMOG00000020042	lsm14b	93	49.584	Mola_mola
ENSELUG00000016299	LSM14B	92	54.755	ENSMMOG00000017321	LSM14B	90	54.046	Mola_mola
ENSELUG00000016299	LSM14B	69	42.812	ENSMODG00000016690	LSM14B	88	40.580	Monodelphis_domestica
ENSELUG00000016299	LSM14B	93	54.902	ENSMALG00000022251	LSM14B	91	54.155	Monopterus_albus
ENSELUG00000016299	LSM14B	99	48.819	ENSMALG00000004783	lsm14b	90	47.801	Monopterus_albus
ENSELUG00000016299	LSM14B	99	54.020	MGP_CAROLIEiJ_G0024770	Lsm14b	90	53.571	Mus_caroli
ENSELUG00000016299	LSM14B	99	54.020	ENSMUSG00000039108	Lsm14b	90	53.571	Mus_musculus
ENSELUG00000016299	LSM14B	99	54.020	MGP_PahariEiJ_G0026214	Lsm14b	90	53.571	Mus_pahari
ENSELUG00000016299	LSM14B	99	54.020	MGP_SPRETEiJ_G0025693	Lsm14b	90	53.571	Mus_spretus
ENSELUG00000016299	LSM14B	95	45.542	ENSMPUG00000007584	LSM14B	91	44.000	Mustela_putorius_furo
ENSELUG00000016299	LSM14B	99	53.401	ENSMLUG00000000304	LSM14B	90	52.778	Myotis_lucifugus
ENSELUG00000016299	LSM14B	60	44.856	ENSNGAG00000016550	Lsm14b	100	43.673	Nannospalax_galili
ENSELUG00000016299	LSM14B	89	50.427	ENSNLEG00000015757	LSM14B	89	49.363	Nomascus_leucogenys
ENSELUG00000016299	LSM14B	75	69.014	ENSMEUG00000008267	-	71	68.966	Notamacropus_eugenii
ENSELUG00000016299	LSM14B	99	53.197	ENSODEG00000004099	LSM14B	100	53.299	Octodon_degus
ENSELUG00000016299	LSM14B	90	52.722	ENSONIG00000020318	lsm14b	90	53.009	Oreochromis_niloticus
ENSELUG00000016299	LSM14B	74	50.355	ENSOANG00000003370	LSM14B	99	50.175	Ornithorhynchus_anatinus
ENSELUG00000016299	LSM14B	90	50.708	ENSOCUG00000006279	LSM14B	100	50.708	Oryctolagus_cuniculus
ENSELUG00000016299	LSM14B	90	50.872	ENSORLG00000013525	lsm14b	90	51.014	Oryzias_latipes
ENSELUG00000016299	LSM14B	93	50.986	ENSORLG00000028353	LSM14B	91	50.862	Oryzias_latipes
ENSELUG00000016299	LSM14B	62	37.023	ENSORLG00020018191	-	85	39.286	Oryzias_latipes_hni
ENSELUG00000016299	LSM14B	90	51.163	ENSORLG00020020553	lsm14b	90	50.581	Oryzias_latipes_hni
ENSELUG00000016299	LSM14B	93	51.549	ENSORLG00015013157	LSM14B	91	51.437	Oryzias_latipes_hsok
ENSELUG00000016299	LSM14B	90	51.163	ENSORLG00015016862	lsm14b	90	50.581	Oryzias_latipes_hsok
ENSELUG00000016299	LSM14B	90	50.578	ENSOMEG00000023917	lsm14b	90	50.000	Oryzias_melastigma
ENSELUG00000016299	LSM14B	64	40.329	ENSOMEG00000000171	-	83	40.708	Oryzias_melastigma
ENSELUG00000016299	LSM14B	99	48.837	ENSOGAG00000003915	LSM14B	91	47.980	Otolemur_garnettii
ENSELUG00000016299	LSM14B	91	45.729	ENSOARG00000014706	LSM14B	90	44.598	Ovis_aries
ENSELUG00000016299	LSM14B	91	49.860	ENSPPAG00000035799	LSM14B	89	46.875	Pan_paniscus
ENSELUG00000016299	LSM14B	99	54.220	ENSPPRG00000009197	LSM14B	90	53.782	Panthera_pardus
ENSELUG00000016299	LSM14B	61	43.983	ENSPTIG00000021518	LSM14B	88	44.068	Panthera_tigris_altaica
ENSELUG00000016299	LSM14B	99	53.197	ENSPTRG00000013696	LSM14B	100	53.299	Pan_troglodytes
ENSELUG00000016299	LSM14B	99	53.453	ENSPANG00000011747	LSM14B	100	53.553	Papio_anubis
ENSELUG00000016299	LSM14B	100	59.896	ENSPKIG00000003275	lsm14b	88	75.789	Paramormyrops_kingsleyae
ENSELUG00000016299	LSM14B	90	52.825	ENSPSIG00000014762	LSM14B	89	51.735	Pelodiscus_sinensis
ENSELUG00000016299	LSM14B	99	53.181	ENSPEMG00000017688	Lsm14b	90	52.528	Peromyscus_maniculatus_bairdii
ENSELUG00000016299	LSM14B	99	54.359	ENSPCIG00000013405	LSM14B	90	53.933	Phascolarctos_cinereus
ENSELUG00000016299	LSM14B	99	48.942	ENSPFOG00000005631	lsm14b	90	48.397	Poecilia_formosa
ENSELUG00000016299	LSM14B	99	48.942	ENSPLAG00000002449	lsm14b	90	48.397	Poecilia_latipinna
ENSELUG00000016299	LSM14B	90	55.780	ENSPLAG00000005793	LSM14B	90	54.942	Poecilia_latipinna
ENSELUG00000016299	LSM14B	90	55.556	ENSPMEG00000022953	LSM14B	90	55.523	Poecilia_mexicana
ENSELUG00000016299	LSM14B	99	48.942	ENSPMEG00000000745	lsm14b	90	48.397	Poecilia_mexicana
ENSELUG00000016299	LSM14B	62	45.059	ENSPREG00000007828	LSM14B	85	44.715	Poecilia_reticulata
ENSELUG00000016299	LSM14B	99	50.646	ENSPPYG00000011194	LSM14B	90	49.858	Pongo_abelii
ENSELUG00000016299	LSM14B	99	53.197	ENSPCOG00000013625	LSM14B	90	52.661	Propithecus_coquereli
ENSELUG00000016299	LSM14B	71	43.116	ENSPVAG00000017918	LSM14B	88	42.652	Pteropus_vampyrus
ENSELUG00000016299	LSM14B	100	59.847	ENSPNAG00000012777	lsm14b	100	59.847	Pygocentrus_nattereri
ENSELUG00000016299	LSM14B	99	48.853	ENSRNOG00000054557	Lsm14b	91	47.761	Rattus_norvegicus
ENSELUG00000016299	LSM14B	89	50.284	ENSRBIG00000033461	LSM14B	88	49.206	Rhinopithecus_bieti
ENSELUG00000016299	LSM14B	91	50.559	ENSRROG00000042949	LSM14B	81	49.533	Rhinopithecus_roxellana
ENSELUG00000016299	LSM14B	89	49.288	ENSSBOG00000032820	LSM14B	100	49.288	Saimiri_boliviensis_boliviensis
ENSELUG00000016299	LSM14B	90	51.389	ENSSHAG00000015528	LSM14B	88	50.464	Sarcophilus_harrisii
ENSELUG00000016299	LSM14B	100	56.736	ENSSFOG00015004627	lsm14b	91	56.125	Scleropages_formosus
ENSELUG00000016299	LSM14B	100	58.612	ENSSMAG00000000135	LSM14B	91	58.192	Scophthalmus_maximus
ENSELUG00000016299	LSM14B	99	50.000	ENSSMAG00000012725	lsm14b	99	48.187	Scophthalmus_maximus
ENSELUG00000016299	LSM14B	100	60.000	ENSSDUG00000022770	LSM14B	91	59.714	Seriola_dumerili
ENSELUG00000016299	LSM14B	100	52.041	ENSSDUG00000020977	lsm14b	100	52.685	Seriola_dumerili
ENSELUG00000016299	LSM14B	69	46.099	ENSSLDG00000011354	-	88	48.790	Seriola_lalandi_dorsalis
ENSELUG00000016299	LSM14B	51	42.157	ENSSARG00000007749	-	96	41.429	Sorex_araneus
ENSELUG00000016299	LSM14B	92	49.136	ENSSPUG00000014360	LSM14B	93	51.884	Sphenodon_punctatus
ENSELUG00000016299	LSM14B	66	44.906	ENSSPAG00000018854	-	86	42.562	Stegastes_partitus
ENSELUG00000016299	LSM14B	90	51.453	ENSSPAG00000020915	lsm14b	89	51.744	Stegastes_partitus
ENSELUG00000016299	LSM14B	99	53.553	ENSSSCG00000026052	LSM14B	100	42.857	Sus_scrofa
ENSELUG00000016299	LSM14B	89	52.793	ENSTGUG00000007884	LSM14B	89	52.025	Taeniopygia_guttata
ENSELUG00000016299	LSM14B	99	49.869	ENSTRUG00000011354	lsm14b	90	50.000	Takifugu_rubripes
ENSELUG00000016299	LSM14B	93	56.145	ENSTRUG00000001529	LSM14B	91	55.271	Takifugu_rubripes
ENSELUG00000016299	LSM14B	91	49.863	ENSTNIG00000002445	lsm14b	90	48.753	Tetraodon_nigroviridis
ENSELUG00000016299	LSM14B	80	81.081	ENSTTRG00000011043	LSM14B	72	76.190	Tursiops_truncatus
ENSELUG00000016299	LSM14B	98	49.091	ENSUAMG00000025298	LSM14B	89	47.989	Ursus_americanus
ENSELUG00000016299	LSM14B	98	49.091	ENSUMAG00000000480	LSM14B	89	47.989	Ursus_maritimus
ENSELUG00000016299	LSM14B	90	51.831	ENSVVUG00000015920	LSM14B	88	50.943	Vulpes_vulpes
ENSELUG00000016299	LSM14B	86	53.293	ENSXETG00000001997	lsm14b	99	53.593	Xenopus_tropicalis
ENSELUG00000016299	LSM14B	90	49.128	ENSXMAG00000010013	lsm14b	90	47.674	Xiphophorus_maculatus