EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016324 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 171269 bases
Position: chrLG11:30177655-30348923
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000036880	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSELUP00000016521	MMR_HSR1	PF01926.23	2.5e-06	1	1
ENSELUP00000016504	MMR_HSR1	PF01926.23	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000025895	-	5445	-	ENSELUP00000036880	831 (aa)	-	-
ENSELUT00000039803	-	6424	-	ENSELUP00000016521	1097 (aa)	-	-
ENSELUT00000025871	-	6773	-	ENSELUP00000016504	1013 (aa)	-	-

Gene Model

Click here to download ENSELUG00000016324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016324	-	80	64.697	ENSELUG00000016154	-	81	63.597
ENSELUG00000016324	-	99	59.774	ENSELUG00000016238	-	85	61.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016324	-	97	41.320	ENSAPEG00000008962	-	98	41.565	Amphiprion_percula
ENSELUG00000016324	-	79	43.942	ENSAPEG00000007463	-	99	43.796	Amphiprion_percula
ENSELUG00000016324	-	97	41.248	ENSAPEG00000007405	-	99	41.056	Amphiprion_percula
ENSELUG00000016324	-	80	46.188	ENSATEG00000024350	-	99	46.559	Anabas_testudineus
ENSELUG00000016324	-	80	39.412	ENSACLG00000027749	-	98	39.971	Astatotilapia_calliptera
ENSELUG00000016324	-	97	40.754	ENSACLG00000027743	-	95	41.069	Astatotilapia_calliptera
ENSELUG00000016324	-	96	41.544	ENSACLG00000027781	-	95	41.422	Astatotilapia_calliptera
ENSELUG00000016324	-	73	42.995	ENSACLG00000027785	-	99	42.807	Astatotilapia_calliptera
ENSELUG00000016324	-	81	42.711	ENSACLG00000027763	-	88	43.231	Astatotilapia_calliptera
ENSELUG00000016324	-	87	42.473	ENSACLG00000027770	-	94	42.375	Astatotilapia_calliptera
ENSELUG00000016324	-	55	44.397	ENSACLG00000009378	-	86	44.227	Astatotilapia_calliptera
ENSELUG00000016324	-	80	38.223	ENSAMXG00000007315	-	92	38.223	Astyanax_mexicanus
ENSELUG00000016324	-	81	39.916	ENSAMXG00000035650	-	99	39.916	Astyanax_mexicanus
ENSELUG00000016324	-	77	42.727	ENSGACG00000011412	-	99	42.727	Gasterosteus_aculeatus
ENSELUG00000016324	-	69	45.546	ENSLBEG00000025738	-	96	45.805	Labrus_bergylta
ENSELUG00000016324	-	76	40.537	ENSLBEG00000027088	-	96	41.133	Labrus_bergylta
ENSELUG00000016324	-	76	33.235	ENSLOCG00000002868	-	95	33.235	Lepisosteus_oculatus
ENSELUG00000016324	-	98	40.576	ENSMZEG00005023374	-	96	40.816	Maylandia_zebra
ENSELUG00000016324	-	87	42.799	ENSMZEG00005023434	-	85	42.665	Maylandia_zebra
ENSELUG00000016324	-	80	42.097	ENSMZEG00005023437	-	98	42.688	Maylandia_zebra
ENSELUG00000016324	-	97	42.150	ENSMZEG00005004230	-	95	42.289	Maylandia_zebra
ENSELUG00000016324	-	81	42.878	ENSMZEG00005004202	-	98	40.791	Maylandia_zebra
ENSELUG00000016324	-	98	37.455	ENSMZEG00005023384	-	99	37.455	Maylandia_zebra
ENSELUG00000016324	-	80	43.299	ENSMZEG00005026592	-	98	43.152	Maylandia_zebra
ENSELUG00000016324	-	71	32.319	ENSMAUG00000014486	Nuggc	83	32.319	Mesocricetus_auratus
ENSELUG00000016324	-	71	38.328	ENSONIG00000015367	-	99	38.583	Oreochromis_niloticus
ENSELUG00000016324	-	97	39.854	ENSONIG00000005156	-	100	43.062	Oreochromis_niloticus
ENSELUG00000016324	-	71	35.559	ENSONIG00000012332	-	99	36.434	Oreochromis_niloticus
ENSELUG00000016324	-	74	42.171	ENSONIG00000017112	-	98	42.105	Oreochromis_niloticus
ENSELUG00000016324	-	98	41.317	ENSPFOG00000006073	-	99	41.388	Poecilia_formosa
ENSELUG00000016324	-	97	40.334	ENSPLAG00000016480	-	98	40.741	Poecilia_latipinna
ENSELUG00000016324	-	76	41.667	ENSPMEG00000014636	-	98	42.121	Poecilia_mexicana
ENSELUG00000016324	-	67	48.768	ENSPREG00000007347	-	96	49.120	Poecilia_reticulata
ENSELUG00000016324	-	78	45.921	ENSPREG00000009634	-	99	45.770	Poecilia_reticulata
ENSELUG00000016324	-	82	41.477	ENSPNYG00000002532	-	94	41.176	Pundamilia_nyererei
ENSELUG00000016324	-	83	40.081	ENSPNAG00000003204	-	97	40.081	Pygocentrus_nattereri
ENSELUG00000016324	-	69	43.077	ENSRBIG00000043902	NUGGC	81	43.077	Rhinopithecus_bieti
ENSELUG00000016324	-	69	43.077	ENSSBOG00000028930	NUGGC	81	43.077	Saimiri_boliviensis_boliviensis
ENSELUG00000016324	-	83	30.378	ENSSFOG00015023994	-	80	30.117	Scleropages_formosus
ENSELUG00000016324	-	96	43.101	ENSSMAG00000015947	nuggc.3	97	44.567	Scophthalmus_maximus
ENSELUG00000016324	-	72	42.679	ENSSDUG00000010293	-	99	43.302	Seriola_dumerili
ENSELUG00000016324	-	83	40.766	ENSSPAG00000013498	-	94	40.629	Stegastes_partitus
ENSELUG00000016324	-	92	42.785	ENSSPAG00000014020	-	99	42.785	Stegastes_partitus