EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016449 (Gene tree)
Gene ID: 105008404
Gene Symbol: tdp2b
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 3590 bases
Position: chrLG10:24778080-24781669
Accession: 105008404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000016669	Exo_endo_phos	PF03372.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000026111	-	2453	XM_010867702	ENSELUP00000016669	380 (aa)	XP_010866004	UPI0005762107

Gene Model

Click here to download ENSELUG00000016449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016449	tdp2b	82	45.141	ENSELUG00000009321	tdp2a	84	49.084

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016449	tdp2b	95	53.039	ENSG00000111802	TDP2	92	53.039	Homo_sapiens
ENSELUG00000016449	tdp2b	66	64.961	ENSAPOG00000018379	-	89	64.961	Acanthochromis_polyacanthus
ENSELUG00000016449	tdp2b	76	54.355	ENSAMEG00000010230	TDP2	98	54.355	Ailuropoda_melanoleuca
ENSELUG00000016449	tdp2b	68	61.069	ENSAPEG00000004208	-	93	61.069	Amphiprion_percula
ENSELUG00000016449	tdp2b	73	56.338	ENSATEG00000010663	-	92	56.338	Anabas_testudineus
ENSELUG00000016449	tdp2b	95	52.778	ENSACAG00000002332	TDP2	92	53.279	Anolis_carolinensis
ENSELUG00000016449	tdp2b	95	54.144	ENSANAG00000020033	TDP2	92	54.144	Aotus_nancymaae
ENSELUG00000016449	tdp2b	71	63.971	ENSACLG00000016132	tdp2b	92	63.971	Astatotilapia_calliptera
ENSELUG00000016449	tdp2b	71	64.706	ENSACLG00000016174	tdp2b	92	64.706	Astatotilapia_calliptera
ENSELUG00000016449	tdp2b	70	66.667	ENSACLG00000016148	tdp2b	95	66.667	Astatotilapia_calliptera
ENSELUG00000016449	tdp2b	96	65.803	ENSAMXG00000011775	tdp2b	97	65.803	Astyanax_mexicanus
ENSELUG00000016449	tdp2b	71	50.923	ENSAMXG00000036549	tdp2a	87	50.923	Astyanax_mexicanus
ENSELUG00000016449	tdp2b	95	53.315	ENSBTAG00000000365	TDP2	92	53.315	Bos_taurus
ENSELUG00000016449	tdp2b	95	54.696	ENSCJAG00000006074	TDP2	92	54.696	Callithrix_jacchus
ENSELUG00000016449	tdp2b	95	53.867	ENSCJAG00000021963	-	92	53.867	Callithrix_jacchus
ENSELUG00000016449	tdp2b	95	53.039	ENSCAFG00000010428	TDP2	98	53.039	Canis_familiaris
ENSELUG00000016449	tdp2b	76	55.401	ENSCAFG00020009994	TDP2	94	55.401	Canis_lupus_dingo
ENSELUG00000016449	tdp2b	76	56.446	ENSCHIG00000015294	-	93	56.446	Capra_hircus
ENSELUG00000016449	tdp2b	88	51.652	ENSTSYG00000037199	TDP2	99	51.952	Carlito_syrichta
ENSELUG00000016449	tdp2b	95	53.867	ENSCPOG00000006390	TDP2	93	53.867	Cavia_porcellus
ENSELUG00000016449	tdp2b	95	54.420	ENSCCAG00000022734	TDP2	92	54.420	Cebus_capucinus
ENSELUG00000016449	tdp2b	95	53.591	ENSCATG00000022076	TDP2	90	55.052	Cercocebus_atys
ENSELUG00000016449	tdp2b	95	53.315	ENSCLAG00000002072	TDP2	93	53.315	Chinchilla_lanigera
ENSELUG00000016449	tdp2b	95	53.591	ENSCSAG00000007769	TDP2	93	53.591	Chlorocebus_sabaeus
ENSELUG00000016449	tdp2b	96	53.279	ENSCPBG00000006551	TDP2	86	53.279	Chrysemys_picta_bellii
ENSELUG00000016449	tdp2b	95	53.039	ENSCANG00000040122	TDP2	93	53.039	Colobus_angolensis_palliatus
ENSELUG00000016449	tdp2b	95	48.209	ENSCGRG00001000384	Tdp2	95	46.719	Cricetulus_griseus_chok1gshd
ENSELUG00000016449	tdp2b	95	46.006	ENSCGRG00000010250	Tdp2	97	45.407	Cricetulus_griseus_crigri
ENSELUG00000016449	tdp2b	97	69.459	ENSCVAG00000003114	tdp2b	96	70.270	Cyprinodon_variegatus
ENSELUG00000016449	tdp2b	97	63.613	ENSDARG00000035954	tdp2b	96	63.613	Danio_rerio
ENSELUG00000016449	tdp2b	72	50.365	ENSDARG00000069941	tdp2a	59	50.365	Danio_rerio
ENSELUG00000016449	tdp2b	95	53.315	ENSDNOG00000044082	TDP2	91	53.315	Dasypus_novemcinctus
ENSELUG00000016449	tdp2b	75	56.140	ENSETEG00000019096	TDP2	98	56.140	Echinops_telfairi
ENSELUG00000016449	tdp2b	93	34.550	ENSEBUG00000006535	tdp2a	96	34.550	Eptatretus_burgeri
ENSELUG00000016449	tdp2b	95	53.039	ENSEASG00005007656	TDP2	92	53.039	Equus_asinus_asinus
ENSELUG00000016449	tdp2b	95	53.315	ENSECAG00000014264	TDP2	92	53.315	Equus_caballus
ENSELUG00000016449	tdp2b	95	54.545	ENSEEUG00000010776	TDP2	92	54.545	Erinaceus_europaeus
ENSELUG00000016449	tdp2b	95	53.315	ENSFCAG00000025612	TDP2	92	53.315	Felis_catus
ENSELUG00000016449	tdp2b	95	48.907	ENSFALG00000004710	TDP2	93	50.000	Ficedula_albicollis
ENSELUG00000016449	tdp2b	76	57.143	ENSFDAG00000006512	TDP2	94	57.143	Fukomys_damarensis
ENSELUG00000016449	tdp2b	66	57.540	ENSFHEG00000013560	-	86	57.540	Fundulus_heteroclitus
ENSELUG00000016449	tdp2b	96	50.546	ENSGALG00000013637	TDP2	91	50.273	Gallus_gallus
ENSELUG00000016449	tdp2b	96	53.930	ENSGAGG00000002853	TDP2	86	53.930	Gopherus_agassizii
ENSELUG00000016449	tdp2b	95	53.315	ENSGGOG00000014237	TDP2	92	53.315	Gorilla_gorilla
ENSELUG00000016449	tdp2b	54	66.346	ENSHBUG00000005421	-	100	59.167	Haplochromis_burtoni
ENSELUG00000016449	tdp2b	97	70.350	ENSHBUG00000002714	tdp2b	96	70.350	Haplochromis_burtoni
ENSELUG00000016449	tdp2b	96	54.645	ENSHGLG00000008655	TDP2	94	54.645	Heterocephalus_glaber_female
ENSELUG00000016449	tdp2b	95	54.696	ENSHGLG00100019087	TDP2	93	54.696	Heterocephalus_glaber_male
ENSELUG00000016449	tdp2b	96	68.533	ENSIPUG00000013691	tdp2b	95	68.533	Ictalurus_punctatus
ENSELUG00000016449	tdp2b	97	45.822	ENSJJAG00000021685	Tdp2	98	45.822	Jaculus_jaculus
ENSELUG00000016449	tdp2b	67	59.922	ENSKMAG00000015485	-	82	59.922	Kryptolebias_marmoratus
ENSELUG00000016449	tdp2b	96	53.887	ENSLACG00000008852	TDP2	94	53.887	Latimeria_chalumnae
ENSELUG00000016449	tdp2b	76	65.052	ENSLOCG00000005817	tdp2b	98	65.052	Lepisosteus_oculatus
ENSELUG00000016449	tdp2b	95	53.591	ENSLAFG00000002567	TDP2	95	53.591	Loxodonta_africana
ENSELUG00000016449	tdp2b	95	53.591	ENSMFAG00000045296	TDP2	93	53.591	Macaca_fascicularis
ENSELUG00000016449	tdp2b	95	53.591	ENSMMUG00000009803	TDP2	93	53.591	Macaca_mulatta
ENSELUG00000016449	tdp2b	95	53.591	ENSMNEG00000038003	TDP2	93	53.591	Macaca_nemestrina
ENSELUG00000016449	tdp2b	95	53.591	ENSMLEG00000028883	TDP2	93	53.591	Mandrillus_leucophaeus
ENSELUG00000016449	tdp2b	98	69.519	ENSMAMG00000013654	tdp2b	97	69.519	Mastacembelus_armatus
ENSELUG00000016449	tdp2b	71	63.100	ENSMZEG00005004153	tdp2b	95	63.100	Maylandia_zebra
ENSELUG00000016449	tdp2b	64	66.122	ENSMZEG00005004055	tdp2b	81	66.122	Maylandia_zebra
ENSELUG00000016449	tdp2b	71	64.576	ENSMZEG00005004126	tdp2b	91	64.576	Maylandia_zebra
ENSELUG00000016449	tdp2b	76	62.457	ENSMZEG00005004077	tdp2b	99	62.457	Maylandia_zebra
ENSELUG00000016449	tdp2b	62	61.017	ENSMZEG00005003980	-	77	61.017	Maylandia_zebra
ENSELUG00000016449	tdp2b	97	69.003	ENSMZEG00005003950	tdp2b	96	69.003	Maylandia_zebra
ENSELUG00000016449	tdp2b	69	60.377	ENSMZEG00005004103	tdp2b	89	60.377	Maylandia_zebra
ENSELUG00000016449	tdp2b	96	51.639	ENSMGAG00000008014	TDP2	91	51.639	Meleagris_gallopavo
ENSELUG00000016449	tdp2b	95	48.209	ENSMAUG00000014451	Tdp2	95	46.719	Mesocricetus_auratus
ENSELUG00000016449	tdp2b	95	53.591	ENSMICG00000000039	TDP2	93	55.556	Microcebus_murinus
ENSELUG00000016449	tdp2b	95	49.311	ENSMOCG00000002823	Tdp2	95	47.769	Microtus_ochrogaster
ENSELUG00000016449	tdp2b	86	55.046	ENSMODG00000011653	TDP2	94	55.046	Monodelphis_domestica
ENSELUG00000016449	tdp2b	74	58.363	ENSMALG00000005368	-	95	58.363	Monopterus_albus
ENSELUG00000016449	tdp2b	95	50.546	MGP_CAROLIEiJ_G0018354	Tdp2	94	49.606	Mus_caroli
ENSELUG00000016449	tdp2b	95	50.000	ENSMUSG00000035958	Tdp2	90	50.000	Mus_musculus
ENSELUG00000016449	tdp2b	95	48.209	MGP_PahariEiJ_G0019417	Tdp2	90	48.209	Mus_pahari
ENSELUG00000016449	tdp2b	99	48.819	MGP_SPRETEiJ_G0019220	Tdp2	93	48.819	Mus_spretus
ENSELUG00000016449	tdp2b	95	52.486	ENSMPUG00000004516	TDP2	93	53.039	Mustela_putorius_furo
ENSELUG00000016449	tdp2b	94	49.587	ENSMLUG00000013506	TDP2	92	50.696	Myotis_lucifugus
ENSELUG00000016449	tdp2b	94	47.486	ENSNGAG00000001375	Tdp2	89	47.486	Nannospalax_galili
ENSELUG00000016449	tdp2b	95	53.039	ENSNLEG00000002447	TDP2	94	53.039	Nomascus_leucogenys
ENSELUG00000016449	tdp2b	96	53.005	ENSOPRG00000016299	TDP2	97	53.005	Ochotona_princeps
ENSELUG00000016449	tdp2b	76	57.840	ENSODEG00000014018	TDP2	93	57.840	Octodon_degus
ENSELUG00000016449	tdp2b	96	50.954	ENSOCUG00000013773	TDP2	93	50.954	Oryctolagus_cuniculus
ENSELUG00000016449	tdp2b	67	58.984	ENSORLG00000001661	-	93	58.984	Oryzias_latipes
ENSELUG00000016449	tdp2b	75	54.704	ENSORLG00020004634	-	93	58.984	Oryzias_latipes_hni
ENSELUG00000016449	tdp2b	70	50.752	ENSORLG00015008190	-	96	50.752	Oryzias_latipes_hsok
ENSELUG00000016449	tdp2b	73	54.839	ENSOMEG00000015899	-	93	57.937	Oryzias_melastigma
ENSELUG00000016449	tdp2b	95	53.867	ENSOGAG00000025303	TDP2	91	53.867	Otolemur_garnettii
ENSELUG00000016449	tdp2b	95	53.039	ENSPPAG00000029023	TDP2	91	54.704	Pan_paniscus
ENSELUG00000016449	tdp2b	95	53.039	ENSPPRG00000015398	TDP2	92	53.039	Panthera_pardus
ENSELUG00000016449	tdp2b	76	54.007	ENSPTIG00000018574	TDP2	94	54.007	Panthera_tigris_altaica
ENSELUG00000016449	tdp2b	95	53.039	ENSPTRG00000017778	TDP2	92	53.039	Pan_troglodytes
ENSELUG00000016449	tdp2b	95	53.315	ENSPANG00000017590	TDP2	93	53.315	Papio_anubis
ENSELUG00000016449	tdp2b	98	67.655	ENSPKIG00000006483	tdp2b	96	67.655	Paramormyrops_kingsleyae
ENSELUG00000016449	tdp2b	76	56.098	ENSPSIG00000004948	TDP2	94	56.098	Pelodiscus_sinensis
ENSELUG00000016449	tdp2b	95	49.862	ENSPEMG00000001788	Tdp2	90	49.862	Peromyscus_maniculatus_bairdii
ENSELUG00000016449	tdp2b	67	43.071	ENSPMAG00000001570	tdp2b	97	43.446	Petromyzon_marinus
ENSELUG00000016449	tdp2b	96	54.396	ENSPCIG00000007316	TDP2	89	54.348	Phascolarctos_cinereus
ENSELUG00000016449	tdp2b	71	54.613	ENSPFOG00000017990	-	96	54.613	Poecilia_formosa
ENSELUG00000016449	tdp2b	70	54.851	ENSPLAG00000019439	-	82	54.851	Poecilia_latipinna
ENSELUG00000016449	tdp2b	66	57.769	ENSPMEG00000010824	-	84	57.769	Poecilia_mexicana
ENSELUG00000016449	tdp2b	95	52.762	ENSPPYG00000016282	TDP2	85	52.762	Pongo_abelii
ENSELUG00000016449	tdp2b	95	53.867	ENSPCOG00000021415	TDP2	96	55.052	Propithecus_coquereli
ENSELUG00000016449	tdp2b	71	59.582	ENSPNYG00000011504	tdp2b	93	59.582	Pundamilia_nyererei
ENSELUG00000016449	tdp2b	52	52.551	ENSPNYG00000001944	-	67	59.006	Pundamilia_nyererei
ENSELUG00000016449	tdp2b	97	68.194	ENSPNYG00000011532	tdp2b	96	68.194	Pundamilia_nyererei
ENSELUG00000016449	tdp2b	65	57.258	ENSPNAG00000022162	tdp2a	63	57.258	Pygocentrus_nattereri
ENSELUG00000016449	tdp2b	93	48.451	ENSRNOG00000018246	Tdp2	89	48.451	Rattus_norvegicus
ENSELUG00000016449	tdp2b	95	53.039	ENSRBIG00000037119	TDP2	93	53.039	Rhinopithecus_bieti
ENSELUG00000016449	tdp2b	95	52.762	ENSRROG00000005025	TDP2	90	54.355	Rhinopithecus_roxellana
ENSELUG00000016449	tdp2b	95	53.867	ENSSBOG00000028734	TDP2	90	55.052	Saimiri_boliviensis_boliviensis
ENSELUG00000016449	tdp2b	95	54.972	ENSSHAG00000002506	TDP2	90	54.972	Sarcophilus_harrisii
ENSELUG00000016449	tdp2b	67	57.480	ENSSFOG00015011322	-	71	57.480	Scleropages_formosus
ENSELUG00000016449	tdp2b	76	52.941	ENSSARG00000013547	TDP2	99	52.941	Sorex_araneus
ENSELUG00000016449	tdp2b	96	49.730	ENSSPUG00000008288	TDP2	95	49.730	Sphenodon_punctatus
ENSELUG00000016449	tdp2b	95	53.591	ENSSSCG00000001092	TDP2	92	53.591	Sus_scrofa
ENSELUG00000016449	tdp2b	66	57.769	ENSTGUG00000009035	TDP2	95	57.769	Taeniopygia_guttata
ENSELUG00000016449	tdp2b	99	68.783	ENSTRUG00000014347	tdp2b	99	68.783	Takifugu_rubripes
ENSELUG00000016449	tdp2b	66	60.800	ENSTRUG00000012218	-	87	60.800	Takifugu_rubripes
ENSELUG00000016449	tdp2b	99	70.106	ENSTNIG00000017792	tdp2b	99	70.106	Tetraodon_nigroviridis
ENSELUG00000016449	tdp2b	68	59.615	ENSTNIG00000010260	TDP2	97	59.615	Tetraodon_nigroviridis
ENSELUG00000016449	tdp2b	95	53.591	ENSTTRG00000016376	TDP2	92	53.039	Tursiops_truncatus
ENSELUG00000016449	tdp2b	94	50.696	ENSUAMG00000025939	TDP2	92	50.696	Ursus_americanus
ENSELUG00000016449	tdp2b	79	52.131	ENSUMAG00000020111	TDP2	97	52.131	Ursus_maritimus
ENSELUG00000016449	tdp2b	95	53.552	ENSXETG00000014826	tdp2	93	53.552	Xenopus_tropicalis
ENSELUG00000016449	tdp2b	66	57.143	ENSXCOG00000010778	-	70	57.143	Xiphophorus_couchianus
ENSELUG00000016449	tdp2b	66	57.540	ENSXMAG00000022252	-	73	57.540	Xiphophorus_maculatus