EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016800 (Gene tree)
Gene ID: 105015445
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 1933 bases
Position: chrLG15:13254984-13256916
Accession: 105015445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017013	RRM_1	PF00076.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000026512	-	978	XM_010878627	ENSELUP00000017013	101 (aa)	XP_010876929	C1BZG4

Gene Model

Click here to download ENSELUG00000016800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016800	slirp	89	30.556	ENSELUG00000003241	hnrnpdl	52	30.556
ENSELUG00000016800	slirp	99	31.325	ENSELUG00000011747	msi2a	55	31.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016800	slirp	73	55.405	ENSG00000119705	SLIRP	92	55.714	Homo_sapiens
ENSELUG00000016800	slirp	95	76.042	ENSAPOG00000001298	slirp	96	76.042	Acanthochromis_polyacanthus
ENSELUG00000016800	slirp	69	52.857	ENSAMEG00000003975	SLIRP	77	52.857	Ailuropoda_melanoleuca
ENSELUG00000016800	slirp	96	73.469	ENSACIG00000023083	slirp	97	73.469	Amphilophus_citrinellus
ENSELUG00000016800	slirp	93	73.404	ENSAOCG00000006342	slirp	95	73.404	Amphiprion_ocellaris
ENSELUG00000016800	slirp	93	73.404	ENSAPEG00000015917	slirp	95	73.404	Amphiprion_percula
ENSELUG00000016800	slirp	93	73.404	ENSAPEG00000015719	-	96	73.404	Amphiprion_percula
ENSELUG00000016800	slirp	93	73.404	ENSATEG00000013525	slirp	94	73.404	Anabas_testudineus
ENSELUG00000016800	slirp	98	59.596	ENSAMXG00000018693	slirp	99	59.596	Astyanax_mexicanus
ENSELUG00000016800	slirp	73	56.757	ENSCJAG00000016946	SLIRP	70	56.923	Callithrix_jacchus
ENSELUG00000016800	slirp	84	54.651	ENSCAFG00020015876	-	77	54.651	Canis_lupus_dingo
ENSELUG00000016800	slirp	73	55.405	ENSCCAG00000030130	SLIRP	69	55.405	Cebus_capucinus
ENSELUG00000016800	slirp	70	57.746	ENSCATG00000036327	SLIRP	70	60.000	Cercocebus_atys
ENSELUG00000016800	slirp	70	59.155	ENSCSAG00000011736	SLIRP	65	59.155	Chlorocebus_sabaeus
ENSELUG00000016800	slirp	80	62.963	ENSCPBG00000026327	SLIRP	82	62.963	Chrysemys_picta_bellii
ENSELUG00000016800	slirp	65	62.121	ENSCANG00000032892	SLIRP	66	63.077	Colobus_angolensis_palliatus
ENSELUG00000016800	slirp	70	49.296	ENSCGRG00001024068	Slirp	64	49.296	Cricetulus_griseus_chok1gshd
ENSELUG00000016800	slirp	70	49.296	ENSCGRG00000017440	Slirp	64	49.296	Cricetulus_griseus_crigri
ENSELUG00000016800	slirp	83	60.714	ENSCSEG00000015766	slirp	86	60.714	Cynoglossus_semilaevis
ENSELUG00000016800	slirp	89	67.778	ENSCVAG00000012504	slirp	86	67.778	Cyprinodon_variegatus
ENSELUG00000016800	slirp	90	75.824	ENSDARG00000097753	slirp	91	74.468	Danio_rerio
ENSELUG00000016800	slirp	84	42.353	ENSDNOG00000007721	SLIRP	77	42.353	Dasypus_novemcinctus
ENSELUG00000016800	slirp	84	48.837	ENSDORG00000012379	Slirp	77	48.837	Dipodomys_ordii
ENSELUG00000016800	slirp	74	54.667	ENSETEG00000010345	SLIRP	69	54.667	Echinops_telfairi
ENSELUG00000016800	slirp	84	55.814	ENSEASG00005020193	SLIRP	77	55.814	Equus_asinus_asinus
ENSELUG00000016800	slirp	94	41.667	ENSEEUG00000007257	SLIRP	95	41.667	Erinaceus_europaeus
ENSELUG00000016800	slirp	64	60.000	ENSFCAG00000036326	SLIRP	66	60.000	Felis_catus
ENSELUG00000016800	slirp	77	53.846	ENSFALG00000012583	SLIRP	80	52.941	Ficedula_albicollis
ENSELUG00000016800	slirp	84	52.326	ENSFDAG00000008347	SLIRP	76	52.326	Fukomys_damarensis
ENSELUG00000016800	slirp	73	79.730	ENSFHEG00000004709	slirp	80	79.730	Fundulus_heteroclitus
ENSELUG00000016800	slirp	94	71.579	ENSGMOG00000016948	slirp	91	71.579	Gadus_morhua
ENSELUG00000016800	slirp	91	54.255	ENSGALG00000031238	SLIRP	95	54.255	Gallus_gallus
ENSELUG00000016800	slirp	94	71.579	ENSGAFG00000010998	slirp	95	71.579	Gambusia_affinis
ENSELUG00000016800	slirp	81	71.951	ENSGACG00000020137	slirp	95	71.951	Gasterosteus_aculeatus
ENSELUG00000016800	slirp	92	56.383	ENSGAGG00000009953	SLIRP	65	56.383	Gopherus_agassizii
ENSELUG00000016800	slirp	73	55.405	ENSGGOG00000011059	-	70	58.462	Gorilla_gorilla
ENSELUG00000016800	slirp	84	47.674	ENSHGLG00000018491	SLIRP	77	47.674	Heterocephalus_glaber_female
ENSELUG00000016800	slirp	84	47.674	ENSHGLG00100014153	SLIRP	77	47.674	Heterocephalus_glaber_male
ENSELUG00000016800	slirp	94	73.684	ENSHCOG00000006795	slirp	96	73.684	Hippocampus_comes
ENSELUG00000016800	slirp	98	76.768	ENSIPUG00000010214	SLIRP	99	76.768	Ictalurus_punctatus
ENSELUG00000016800	slirp	84	51.163	ENSSTOG00000034316	SLIRP	77	51.163	Ictidomys_tridecemlineatus
ENSELUG00000016800	slirp	95	64.583	ENSKMAG00000002038	slirp	92	64.583	Kryptolebias_marmoratus
ENSELUG00000016800	slirp	95	68.750	ENSLBEG00000007564	slirp	96	68.750	Labrus_bergylta
ENSELUG00000016800	slirp	98	67.677	ENSLACG00000013434	SLIRP	95	67.677	Latimeria_chalumnae
ENSELUG00000016800	slirp	70	59.155	ENSMFAG00000042960	SLIRP	70	60.000	Macaca_fascicularis
ENSELUG00000016800	slirp	82	53.012	ENSMMUG00000029256	SLIRP	70	60.000	Macaca_mulatta
ENSELUG00000016800	slirp	70	59.155	ENSMNEG00000028921	SLIRP	70	60.000	Macaca_nemestrina
ENSELUG00000016800	slirp	64	60.000	ENSMLEG00000043644	SLIRP	66	60.000	Mandrillus_leucophaeus
ENSELUG00000016800	slirp	94	76.842	ENSMZEG00005004617	slirp	96	76.842	Maylandia_zebra
ENSELUG00000016800	slirp	84	48.837	ENSMAUG00000003857	Slirp	77	48.837	Mesocricetus_auratus
ENSELUG00000016800	slirp	82	51.807	ENSMICG00000012080	SLIRP	75	51.807	Microcebus_murinus
ENSELUG00000016800	slirp	84	51.163	ENSMOCG00000016019	Slirp	77	51.163	Microtus_ochrogaster
ENSELUG00000016800	slirp	95	77.083	ENSMMOG00000018268	slirp	96	77.083	Mola_mola
ENSELUG00000016800	slirp	69	52.857	ENSMODG00000005207	-	99	52.857	Monodelphis_domestica
ENSELUG00000016800	slirp	95	69.792	ENSMALG00000012581	slirp	98	69.792	Monopterus_albus
ENSELUG00000016800	slirp	84	50.000	MGP_CAROLIEiJ_G0017995	Slirp	80	50.000	Mus_caroli
ENSELUG00000016800	slirp	84	50.000	ENSMUSG00000021040	Slirp	77	50.000	Mus_musculus
ENSELUG00000016800	slirp	84	50.000	MGP_SPRETEiJ_G0018840	Slirp	77	50.000	Mus_spretus
ENSELUG00000016800	slirp	94	52.083	ENSMLUG00000029544	-	85	52.083	Myotis_lucifugus
ENSELUG00000016800	slirp	83	55.294	ENSMLUG00000024998	-	77	55.294	Myotis_lucifugus
ENSELUG00000016800	slirp	84	47.674	ENSNGAG00000016363	Slirp	83	47.674	Nannospalax_galili
ENSELUG00000016800	slirp	74	49.333	ENSNLEG00000032459	-	72	49.254	Nomascus_leucogenys
ENSELUG00000016800	slirp	74	49.333	ENSNLEG00000027238	-	80	50.000	Nomascus_leucogenys
ENSELUG00000016800	slirp	84	51.163	ENSODEG00000012580	SLIRP	76	54.286	Octodon_degus
ENSELUG00000016800	slirp	94	76.842	ENSONIG00000011692	slirp	96	76.842	Oreochromis_niloticus
ENSELUG00000016800	slirp	77	61.250	ENSOANG00000022366	SLIRP	72	61.250	Ornithorhynchus_anatinus
ENSELUG00000016800	slirp	96	76.289	ENSORLG00000010761	slirp	75	76.289	Oryzias_latipes
ENSELUG00000016800	slirp	96	76.289	ENSORLG00020022188	slirp	97	76.289	Oryzias_latipes_hni
ENSELUG00000016800	slirp	95	77.083	ENSORLG00015020171	slirp	95	77.083	Oryzias_latipes_hsok
ENSELUG00000016800	slirp	96	74.227	ENSOMEG00000019321	slirp	97	74.227	Oryzias_melastigma
ENSELUG00000016800	slirp	84	51.765	ENSPPAG00000040710	-	77	51.765	Pan_paniscus
ENSELUG00000016800	slirp	64	60.000	ENSPPRG00000014350	SLIRP	66	60.000	Panthera_pardus
ENSELUG00000016800	slirp	64	60.000	ENSPTIG00000014196	SLIRP	66	60.000	Panthera_tigris_altaica
ENSELUG00000016800	slirp	73	55.405	ENSPTRG00000030691	SLIRP	70	58.462	Pan_troglodytes
ENSELUG00000016800	slirp	70	60.563	ENSPANG00000026323	SLIRP	70	61.538	Papio_anubis
ENSELUG00000016800	slirp	64	72.308	ENSPKIG00000008831	slirp	64	72.308	Paramormyrops_kingsleyae
ENSELUG00000016800	slirp	79	76.250	ENSPMGG00000010541	slirp	92	76.250	Periophthalmus_magnuspinnatus
ENSELUG00000016800	slirp	70	52.113	ENSPEMG00000013234	Slirp	69	50.000	Peromyscus_maniculatus_bairdii
ENSELUG00000016800	slirp	84	49.412	ENSPMAG00000009355	slirp	94	49.412	Petromyzon_marinus
ENSELUG00000016800	slirp	78	46.835	ENSPCIG00000026842	-	85	46.835	Phascolarctos_cinereus
ENSELUG00000016800	slirp	95	69.792	ENSPFOG00000006758	slirp	96	69.792	Poecilia_formosa
ENSELUG00000016800	slirp	95	69.792	ENSPLAG00000011140	slirp	96	69.792	Poecilia_latipinna
ENSELUG00000016800	slirp	95	69.792	ENSPMEG00000019535	slirp	96	69.792	Poecilia_mexicana
ENSELUG00000016800	slirp	95	69.792	ENSPREG00000011673	slirp	96	69.792	Poecilia_reticulata
ENSELUG00000016800	slirp	69	60.000	ENSPPYG00000006030	SLIRP	64	60.000	Pongo_abelii
ENSELUG00000016800	slirp	82	48.193	ENSPCOG00000015159	SLIRP	75	48.193	Propithecus_coquereli
ENSELUG00000016800	slirp	95	75.000	ENSPNAG00000008633	slirp	97	75.000	Pygocentrus_nattereri
ENSELUG00000016800	slirp	64	61.538	ENSRBIG00000031396	-	65	61.538	Rhinopithecus_bieti
ENSELUG00000016800	slirp	73	54.054	ENSRBIG00000035817	-	68	54.054	Rhinopithecus_bieti
ENSELUG00000016800	slirp	65	59.091	ENSRBIG00000032998	-	60	60.000	Rhinopithecus_bieti
ENSELUG00000016800	slirp	73	59.459	ENSRBIG00000032222	-	70	61.538	Rhinopithecus_bieti
ENSELUG00000016800	slirp	64	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSELUG00000016800	slirp	70	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSELUG00000016800	slirp	65	60.606	ENSRROG00000017133	-	68	61.538	Rhinopithecus_roxellana
ENSELUG00000016800	slirp	73	59.459	ENSRROG00000036656	-	70	61.538	Rhinopithecus_roxellana
ENSELUG00000016800	slirp	64	58.462	ENSSBOG00000020014	SLIRP	70	58.462	Saimiri_boliviensis_boliviensis
ENSELUG00000016800	slirp	98	59.596	ENSSFOG00015011165	slirp	99	59.596	Scleropages_formosus
ENSELUG00000016800	slirp	99	47.059	ENSSMAG00000012930	slirp	100	47.059	Scophthalmus_maximus
ENSELUG00000016800	slirp	95	76.042	ENSSDUG00000021883	slirp	63	76.042	Seriola_dumerili
ENSELUG00000016800	slirp	95	76.042	ENSSLDG00000023136	slirp	87	76.042	Seriola_lalandi_dorsalis
ENSELUG00000016800	slirp	81	58.140	ENSSPUG00000009346	SLIRP	88	58.140	Sphenodon_punctatus
ENSELUG00000016800	slirp	95	64.583	ENSSPAG00000013477	slirp	96	64.583	Stegastes_partitus
ENSELUG00000016800	slirp	84	52.326	ENSSSCG00000028167	SLIRP	77	52.326	Sus_scrofa
ENSELUG00000016800	slirp	77	56.410	ENSTGUG00000012337	SLIRP	88	52.688	Taeniopygia_guttata
ENSELUG00000016800	slirp	94	69.792	ENSTRUG00000020127	slirp	95	69.792	Takifugu_rubripes
ENSELUG00000016800	slirp	84	55.814	ENSUAMG00000022445	SLIRP	77	55.814	Ursus_americanus
ENSELUG00000016800	slirp	84	55.814	ENSUMAG00000007166	SLIRP	77	55.814	Ursus_maritimus
ENSELUG00000016800	slirp	76	52.564	ENSVPAG00000001781	SLIRP	72	52.564	Vicugna_pacos
ENSELUG00000016800	slirp	84	52.326	ENSVVUG00000004436	SLIRP	77	52.326	Vulpes_vulpes
ENSELUG00000016800	slirp	80	71.605	ENSXETG00000030343	SLIRP	91	71.605	Xenopus_tropicalis
ENSELUG00000016800	slirp	95	68.750	ENSXCOG00000009422	slirp	96	68.750	Xiphophorus_couchianus
ENSELUG00000016800	slirp	95	70.833	ENSXMAG00000015655	slirp	96	70.833	Xiphophorus_maculatus