EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000016840 (Gene tree)
Gene ID: 105012320
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 10989 bases
Position: chrLG09:1685472-1696460
Accession: 105012320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037249	RRP36	PF06102.12	5.7e-45	1	1
ENSELUP00000017103	RRP36	PF06102.12	6.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000026623	-	5326	-	ENSELUP00000017103	329 (aa)	-	-
ENSELUT00000026617	-	2831	XM_010873062	ENSELUP00000037249	357 (aa)	XP_010871364	UPI0005761EE7

Gene Model

Click here to download ENSELUG00000016840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016840	rrp36	61	53.182	ENSG00000124541	RRP36	85	53.182	Homo_sapiens
ENSELUG00000016840	rrp36	59	74.286	ENSAPOG00000022015	rrp36	96	55.096	Acanthochromis_polyacanthus
ENSELUG00000016840	rrp36	88	59.236	ENSACIG00000020578	-	92	52.848	Amphilophus_citrinellus
ENSELUG00000016840	rrp36	62	73.991	ENSAOCG00000013439	rrp36	94	60.125	Amphiprion_ocellaris
ENSELUG00000016840	rrp36	62	73.991	ENSAPEG00000020996	rrp36	94	60.436	Amphiprion_percula
ENSELUG00000016840	rrp36	64	73.568	ENSATEG00000016946	rrp36	94	61.538	Anabas_testudineus
ENSELUG00000016840	rrp36	61	51.818	ENSANAG00000021773	RRP36	86	51.818	Aotus_nancymaae
ENSELUG00000016840	rrp36	62	67.265	ENSACLG00000008408	rrp36	94	67.265	Astatotilapia_calliptera
ENSELUG00000016840	rrp36	59	60.000	ENSACLG00000013982	RRP36	86	60.000	Astatotilapia_calliptera
ENSELUG00000016840	rrp36	60	52.968	ENSBTAG00000053873	RRP36	89	52.968	Bos_taurus
ENSELUG00000016840	rrp36	61	50.909	ENSCJAG00000004943	RRP36	86	50.909	Callithrix_jacchus
ENSELUG00000016840	rrp36	65	50.000	ENSCAFG00020011057	RRP36	91	52.752	Canis_lupus_dingo
ENSELUG00000016840	rrp36	59	54.206	ENSCHIG00000016354	-	84	54.206	Capra_hircus
ENSELUG00000016840	rrp36	59	42.991	ENSCHIG00000019781	-	91	41.518	Capra_hircus
ENSELUG00000016840	rrp36	55	52.736	ENSCHIG00000003210	-	89	52.736	Capra_hircus
ENSELUG00000016840	rrp36	64	49.573	ENSTSYG00000037176	RRP36	91	49.573	Carlito_syrichta
ENSELUG00000016840	rrp36	58	52.857	ENSCAPG00000010983	RRP36	90	51.905	Cavia_aperea
ENSELUG00000016840	rrp36	59	51.174	ENSCPOG00000025932	RRP36	95	51.174	Cavia_porcellus
ENSELUG00000016840	rrp36	61	51.364	ENSCCAG00000000048	RRP36	86	51.364	Cebus_capucinus
ENSELUG00000016840	rrp36	61	52.727	ENSCATG00000041903	RRP36	85	52.727	Cercocebus_atys
ENSELUG00000016840	rrp36	59	53.023	ENSCLAG00000013166	RRP36	95	53.023	Chinchilla_lanigera
ENSELUG00000016840	rrp36	61	52.727	ENSCSAG00000011553	RRP36	85	52.727	Chlorocebus_sabaeus
ENSELUG00000016840	rrp36	99	47.411	ENSCPBG00000003555	RRP36	60	63.927	Chrysemys_picta_bellii
ENSELUG00000016840	rrp36	59	40.465	ENSCING00000012193	-	84	40.465	Ciona_intestinalis
ENSELUG00000016840	rrp36	59	53.738	ENSCANG00000035127	RRP36	84	53.738	Colobus_angolensis_palliatus
ENSELUG00000016840	rrp36	58	52.885	ENSCGRG00001021461	Rrp36	92	52.885	Cricetulus_griseus_chok1gshd
ENSELUG00000016840	rrp36	58	52.885	ENSCGRG00000006286	Rrp36	92	52.885	Cricetulus_griseus_crigri
ENSELUG00000016840	rrp36	63	72.444	ENSCSEG00000001039	RRP36	70	71.616	Cynoglossus_semilaevis
ENSELUG00000016840	rrp36	60	58.986	ENSCVAG00000017798	rrp36	95	58.986	Cyprinodon_variegatus
ENSELUG00000016840	rrp36	87	59.223	ENSDARG00000032516	rrp36	94	55.864	Danio_rerio
ENSELUG00000016840	rrp36	59	50.000	ENSDORG00000012186	Rrp36	92	50.000	Dipodomys_ordii
ENSELUG00000016840	rrp36	61	37.118	FBgn0038235	CG8461	93	36.596	Drosophila_melanogaster
ENSELUG00000016840	rrp36	61	53.182	ENSEASG00005003169	RRP36	93	53.738	Equus_asinus_asinus
ENSELUG00000016840	rrp36	61	53.182	ENSECAG00000040238	RRP36	93	53.738	Equus_caballus
ENSELUG00000016840	rrp36	63	43.043	ENSEEUG00000010515	RRP36	90	43.043	Erinaceus_europaeus
ENSELUG00000016840	rrp36	59	54.630	ENSFCAG00000043818	RRP36	90	53.304	Felis_catus
ENSELUG00000016840	rrp36	59	52.093	ENSFDAG00000010380	RRP36	99	52.093	Fukomys_damarensis
ENSELUG00000016840	rrp36	50	64.045	ENSFHEG00000000761	rrp36	90	64.045	Fundulus_heteroclitus
ENSELUG00000016840	rrp36	61	68.493	ENSGAFG00000017817	rrp36	62	68.493	Gambusia_affinis
ENSELUG00000016840	rrp36	73	65.267	ENSGACG00000019603	RRP36	96	59.202	Gasterosteus_aculeatus
ENSELUG00000016840	rrp36	99	47.514	ENSGAGG00000019161	RRP36	50	63.470	Gopherus_agassizii
ENSELUG00000016840	rrp36	61	52.727	ENSGGOG00000037384	RRP36	87	52.727	Gorilla_gorilla
ENSELUG00000016840	rrp36	86	58.974	ENSHBUG00000008974	RRP36	69	71.300	Haplochromis_burtoni
ENSELUG00000016840	rrp36	58	54.245	ENSHGLG00000018082	RRP36	83	54.245	Heterocephalus_glaber_female
ENSELUG00000016840	rrp36	58	54.245	ENSHGLG00100019303	RRP36	83	54.245	Heterocephalus_glaber_male
ENSELUG00000016840	rrp36	60	45.581	ENSHCOG00000010303	rrp36	83	46.047	Hippocampus_comes
ENSELUG00000016840	rrp36	73	54.054	ENSIPUG00000016548	rrp36	69	62.981	Ictalurus_punctatus
ENSELUG00000016840	rrp36	58	52.830	ENSSTOG00000009511	RRP36	90	52.830	Ictidomys_tridecemlineatus
ENSELUG00000016840	rrp36	59	53.302	ENSJJAG00000023363	Rrp36	94	53.302	Jaculus_jaculus
ENSELUG00000016840	rrp36	86	63.987	ENSKMAG00000006968	rrp36	92	62.346	Kryptolebias_marmoratus
ENSELUG00000016840	rrp36	57	77.419	ENSLBEG00000017728	-	96	58.217	Labrus_bergylta
ENSELUG00000016840	rrp36	76	56.000	ENSLACG00000001888	rrp36	69	63.514	Latimeria_chalumnae
ENSELUG00000016840	rrp36	92	55.655	ENSLOCG00000015862	RRP36	93	54.438	Lepisosteus_oculatus
ENSELUG00000016840	rrp36	59	51.835	ENSLAFG00000032704	RRP36	99	51.835	Loxodonta_africana
ENSELUG00000016840	rrp36	61	52.727	ENSMFAG00000003547	RRP36	85	52.727	Macaca_fascicularis
ENSELUG00000016840	rrp36	61	52.273	ENSMNEG00000044747	RRP36	85	52.273	Macaca_nemestrina
ENSELUG00000016840	rrp36	61	52.727	ENSMLEG00000034272	RRP36	85	52.727	Mandrillus_leucophaeus
ENSELUG00000016840	rrp36	61	75.342	ENSMAMG00000019157	-	92	59.347	Mastacembelus_armatus
ENSELUG00000016840	rrp36	86	59.295	ENSMZEG00005015204	RRP36	69	71.749	Maylandia_zebra
ENSELUG00000016840	rrp36	63	50.442	ENSMAUG00000003648	Rrp36	98	50.442	Mesocricetus_auratus
ENSELUG00000016840	rrp36	61	50.455	ENSMICG00000045230	RRP36	87	50.455	Microcebus_murinus
ENSELUG00000016840	rrp36	58	52.404	ENSMOCG00000002009	Rrp36	86	52.404	Microtus_ochrogaster
ENSELUG00000016840	rrp36	67	67.647	ENSMMOG00000018637	-	88	57.143	Mola_mola
ENSELUG00000016840	rrp36	62	73.991	ENSMALG00000008142	-	91	58.991	Monopterus_albus
ENSELUG00000016840	rrp36	62	49.107	MGP_CAROLIEiJ_G0021680	Rrp36	91	48.889	Mus_caroli
ENSELUG00000016840	rrp36	62	49.554	ENSMUSG00000023971	Rrp36	99	49.333	Mus_musculus
ENSELUG00000016840	rrp36	59	50.943	MGP_PahariEiJ_G0020671	Rrp36	98	49.333	Mus_pahari
ENSELUG00000016840	rrp36	62	49.554	MGP_SPRETEiJ_G0022592	Rrp36	91	49.333	Mus_spretus
ENSELUG00000016840	rrp36	59	53.953	ENSNLEG00000033289	RRP36	99	52.752	Nomascus_leucogenys
ENSELUG00000016840	rrp36	54	52.525	ENSOPRG00000002274	RRP36	80	52.525	Ochotona_princeps
ENSELUG00000016840	rrp36	60	52.489	ENSODEG00000015915	RRP36	96	52.489	Octodon_degus
ENSELUG00000016840	rrp36	88	61.587	ENSONIG00000015983	rrp36	71	73.094	Oreochromis_niloticus
ENSELUG00000016840	rrp36	87	61.875	ENSORLG00000029500	rrp36	94	63.240	Oryzias_latipes
ENSELUG00000016840	rrp36	87	62.187	ENSORLG00020017452	-	94	63.043	Oryzias_latipes_hni
ENSELUG00000016840	rrp36	87	61.950	ENSORLG00015016898	rrp36	93	62.813	Oryzias_latipes_hsok
ENSELUG00000016840	rrp36	62	74.324	ENSOMEG00000008623	RRP36	94	62.187	Oryzias_melastigma
ENSELUG00000016840	rrp36	61	49.091	ENSOGAG00000012699	RRP36	95	49.091	Otolemur_garnettii
ENSELUG00000016840	rrp36	67	40.164	ENSPPAG00000042831	-	85	44.860	Pan_paniscus
ENSELUG00000016840	rrp36	60	53.881	ENSPPRG00000014610	RRP36	91	52.609	Panthera_pardus
ENSELUG00000016840	rrp36	60	53.881	ENSPTIG00000010853	RRP36	91	52.609	Panthera_tigris_altaica
ENSELUG00000016840	rrp36	61	52.727	ENSPTRG00000018184	RRP36	85	52.727	Pan_troglodytes
ENSELUG00000016840	rrp36	61	52.727	ENSPANG00000025140	RRP36	85	52.727	Papio_anubis
ENSELUG00000016840	rrp36	90	61.371	ENSPKIG00000004303	rrp36	92	60.429	Paramormyrops_kingsleyae
ENSELUG00000016840	rrp36	59	64.762	ENSPMGG00000016870	rrp36	66	66.190	Periophthalmus_magnuspinnatus
ENSELUG00000016840	rrp36	64	50.000	ENSPEMG00000007015	Rrp36	97	50.220	Peromyscus_maniculatus_bairdii
ENSELUG00000016840	rrp36	60	52.511	ENSPCIG00000009179	RRP36	88	52.273	Phascolarctos_cinereus
ENSELUG00000016840	rrp36	63	66.964	ENSPFOG00000011959	rrp36	58	66.964	Poecilia_formosa
ENSELUG00000016840	rrp36	63	66.518	ENSPLAG00000023901	rrp36	63	66.518	Poecilia_latipinna
ENSELUG00000016840	rrp36	63	66.518	ENSPMEG00000024099	rrp36	63	66.518	Poecilia_mexicana
ENSELUG00000016840	rrp36	63	65.179	ENSPREG00000022787	rrp36	64	65.179	Poecilia_reticulata
ENSELUG00000016840	rrp36	59	54.206	ENSPPYG00000016628	RRP36	82	54.206	Pongo_abelii
ENSELUG00000016840	rrp36	61	48.636	ENSPCOG00000018401	RRP36	88	48.636	Propithecus_coquereli
ENSELUG00000016840	rrp36	65	48.729	ENSPVAG00000008714	RRP36	94	48.927	Pteropus_vampyrus
ENSELUG00000016840	rrp36	86	59.295	ENSPNYG00000018030	RRP36	69	71.749	Pundamilia_nyererei
ENSELUG00000016840	rrp36	89	54.688	ENSPNAG00000027207	rrp36	69	63.158	Pygocentrus_nattereri
ENSELUG00000016840	rrp36	68	47.951	ENSRNOG00000017836	Rrp36	88	52.093	Rattus_norvegicus
ENSELUG00000016840	rrp36	70	48.062	ENSRBIG00000040019	RRP36	90	51.073	Rhinopithecus_bieti
ENSELUG00000016840	rrp36	70	47.674	ENSRROG00000040721	RRP36	90	50.644	Rhinopithecus_roxellana
ENSELUG00000016840	rrp36	61	53.182	ENSSBOG00000030228	RRP36	88	52.273	Saimiri_boliviensis_boliviensis
ENSELUG00000016840	rrp36	89	58.491	ENSSFOG00015023058	rrp36	67	71.239	Scleropages_formosus
ENSELUG00000016840	rrp36	62	74.888	ENSSMAG00000020911	-	92	59.644	Scophthalmus_maximus
ENSELUG00000016840	rrp36	62	78.475	ENSSDUG00000018924	rrp36	93	61.976	Seriola_dumerili
ENSELUG00000016840	rrp36	58	77.778	ENSSLDG00000019741	RRP36	97	77.778	Seriola_lalandi_dorsalis
ENSELUG00000016840	rrp36	59	51.415	ENSSARG00000000873	RRP36	99	51.415	Sorex_araneus
ENSELUG00000016840	rrp36	61	64.545	ENSSPUG00000000213	RRP36	61	64.545	Sphenodon_punctatus
ENSELUG00000016840	rrp36	59	74.648	ENSSPAG00000017154	rrp36	92	57.764	Stegastes_partitus
ENSELUG00000016840	rrp36	64	51.064	ENSSSCG00000001656	RRP36	94	51.064	Sus_scrofa
ENSELUG00000016840	rrp36	64	38.889	ENSSSCG00000037862	-	90	41.546	Sus_scrofa
ENSELUG00000016840	rrp36	87	57.235	ENSTRUG00000021893	rrp36	68	67.857	Takifugu_rubripes
ENSELUG00000016840	rrp36	69	59.289	ENSTNIG00000004741	rrp36	88	62.844	Tetraodon_nigroviridis
ENSELUG00000016840	rrp36	59	46.262	ENSTBEG00000012326	RRP36	99	46.262	Tupaia_belangeri
ENSELUG00000016840	rrp36	59	53.738	ENSTTRG00000007001	RRP36	89	53.182	Tursiops_truncatus
ENSELUG00000016840	rrp36	68	46.400	ENSUAMG00000015865	RRP36	89	50.000	Ursus_americanus
ENSELUG00000016840	rrp36	59	53.271	ENSVPAG00000008904	RRP36	99	53.271	Vicugna_pacos
ENSELUG00000016840	rrp36	65	50.000	ENSVVUG00000027816	RRP36	91	52.752	Vulpes_vulpes
ENSELUG00000016840	rrp36	63	66.964	ENSXCOG00000011238	rrp36	89	59.330	Xiphophorus_couchianus
ENSELUG00000016840	rrp36	63	67.411	ENSXMAG00000013804	rrp36	62	53.846	Xiphophorus_maculatus