EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000016844 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 37387 bases
Position: chrLG08:611505-648891
Accession: 105028153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037121	ResIII	PF04851.15	5.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000039929	-	2826	XM_020048713	ENSELUP00000037083	941 (aa)	XP_019904272	-
ENSELUT00000039950	-	2943	-	ENSELUP00000037121	980 (aa)	-	-

Gene Model

Click here to download ENSELUG00000016844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000016844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000016844	chd1l	51	38.798	ENSELUG00000010515	smarca1	57	38.798
ENSELUG00000016844	chd1l	52	38.640	ENSELUG00000014653	SMARCA5	55	38.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000016844	chd1l	83	54.850	ENSG00000131778	CHD1L	97	53.934	Homo_sapiens
ENSELUG00000016844	chd1l	97	62.038	ENSAPOG00000001539	chd1l	99	63.835	Acanthochromis_polyacanthus
ENSELUG00000016844	chd1l	85	54.791	ENSAMEG00000017063	CHD1L	95	55.543	Ailuropoda_melanoleuca
ENSELUG00000016844	chd1l	82	61.601	ENSACIG00000001164	chd1l	99	61.180	Amphilophus_citrinellus
ENSELUG00000016844	chd1l	99	61.068	ENSAOCG00000014510	chd1l	100	60.288	Amphiprion_ocellaris
ENSELUG00000016844	chd1l	84	59.773	ENSAPEG00000017573	chd1l	95	60.183	Amphiprion_percula
ENSELUG00000016844	chd1l	88	58.553	ENSAPEG00000017450	chd1l	95	60.620	Amphiprion_percula
ENSELUG00000016844	chd1l	99	61.620	ENSATEG00000013058	chd1l	100	61.702	Anabas_testudineus
ENSELUG00000016844	chd1l	81	53.154	ENSAPLG00000009976	CHD1L	93	53.326	Anas_platyrhynchos
ENSELUG00000016844	chd1l	83	52.301	ENSACAG00000017686	CHD1L	97	52.247	Anolis_carolinensis
ENSELUG00000016844	chd1l	82	55.168	ENSANAG00000024347	CHD1L	95	55.041	Aotus_nancymaae
ENSELUG00000016844	chd1l	93	60.619	ENSACLG00000019304	chd1l	96	61.162	Astatotilapia_calliptera
ENSELUG00000016844	chd1l	99	53.704	ENSAMXG00000012367	chd1l	100	53.158	Astyanax_mexicanus
ENSELUG00000016844	chd1l	84	55.390	ENSBTAG00000020831	CHD1L	95	55.991	Bos_taurus
ENSELUG00000016844	chd1l	83	54.787	ENSCJAG00000002406	CHD1L	95	55.006	Callithrix_jacchus
ENSELUG00000016844	chd1l	84	53.628	ENSCAFG00000010944	CHD1L	95	53.395	Canis_familiaris
ENSELUG00000016844	chd1l	84	55.079	ENSCAFG00020020121	CHD1L	96	55.035	Canis_lupus_dingo
ENSELUG00000016844	chd1l	85	55.215	ENSCHIG00000013871	CHD1L	96	56.286	Capra_hircus
ENSELUG00000016844	chd1l	81	55.294	ENSTSYG00000003005	CHD1L	98	55.621	Carlito_syrichta
ENSELUG00000016844	chd1l	83	53.617	ENSCPOG00000009000	CHD1L	96	53.802	Cavia_porcellus
ENSELUG00000016844	chd1l	83	52.710	ENSCCAG00000036079	CHD1L	95	52.771	Cebus_capucinus
ENSELUG00000016844	chd1l	83	55.224	ENSCATG00000031044	CHD1L	95	55.287	Cercocebus_atys
ENSELUG00000016844	chd1l	83	55.184	ENSCLAG00000000880	CHD1L	96	55.607	Chinchilla_lanigera
ENSELUG00000016844	chd1l	83	55.236	ENSCSAG00000018386	CHD1L	95	55.300	Chlorocebus_sabaeus
ENSELUG00000016844	chd1l	82	56.315	ENSCPBG00000002600	CHD1L	95	55.968	Chrysemys_picta_bellii
ENSELUG00000016844	chd1l	83	54.879	ENSCANG00000020239	CHD1L	95	55.017	Colobus_angolensis_palliatus
ENSELUG00000016844	chd1l	83	54.535	ENSCGRG00001021624	Chd1l	96	54.378	Cricetulus_griseus_chok1gshd
ENSELUG00000016844	chd1l	80	54.739	ENSCGRG00000007554	Chd1l	98	54.578	Cricetulus_griseus_crigri
ENSELUG00000016844	chd1l	93	58.299	ENSCVAG00000002595	chd1l	97	58.197	Cyprinodon_variegatus
ENSELUG00000016844	chd1l	99	59.923	ENSDARG00000015471	chd1l	99	60.443	Danio_rerio
ENSELUG00000016844	chd1l	85	54.228	ENSDNOG00000019504	CHD1L	95	55.466	Dasypus_novemcinctus
ENSELUG00000016844	chd1l	83	54.143	ENSDORG00000013555	Chd1l	95	54.682	Dipodomys_ordii
ENSELUG00000016844	chd1l	77	49.476	ENSETEG00000008445	CHD1L	87	50.538	Echinops_telfairi
ENSELUG00000016844	chd1l	66	45.588	ENSEBUG00000005791	chd1l	88	45.588	Eptatretus_burgeri
ENSELUG00000016844	chd1l	84	54.360	ENSEASG00005007364	CHD1L	98	55.244	Equus_asinus_asinus
ENSELUG00000016844	chd1l	84	54.143	ENSECAG00000008915	CHD1L	98	55.012	Equus_caballus
ENSELUG00000016844	chd1l	83	55.184	ENSFCAG00000007777	CHD1L	95	54.828	Felis_catus
ENSELUG00000016844	chd1l	84	51.932	ENSFALG00000006087	CHD1L	94	52.668	Ficedula_albicollis
ENSELUG00000016844	chd1l	81	55.071	ENSFDAG00000012431	CHD1L	98	55.372	Fukomys_damarensis
ENSELUG00000016844	chd1l	99	59.922	ENSFHEG00000012420	chd1l	100	59.707	Fundulus_heteroclitus
ENSELUG00000016844	chd1l	84	53.356	ENSGALG00000015038	CHD1L	95	53.356	Gallus_gallus
ENSELUG00000016844	chd1l	99	59.519	ENSGAFG00000018198	chd1l	100	59.423	Gambusia_affinis
ENSELUG00000016844	chd1l	82	55.995	ENSGAGG00000014432	CHD1L	96	55.646	Gopherus_agassizii
ENSELUG00000016844	chd1l	83	54.430	ENSGGOG00000001067	CHD1L	95	54.630	Gorilla_gorilla
ENSELUG00000016844	chd1l	93	60.722	ENSHBUG00000007464	chd1l	98	61.320	Haplochromis_burtoni
ENSELUG00000016844	chd1l	83	54.325	ENSHGLG00000008933	CHD1L	96	54.598	Heterocephalus_glaber_female
ENSELUG00000016844	chd1l	80	54.708	ENSHGLG00100007155	CHD1L	98	54.923	Heterocephalus_glaber_male
ENSELUG00000016844	chd1l	83	60.252	ENSHCOG00000012787	chd1l	93	60.367	Hippocampus_comes
ENSELUG00000016844	chd1l	99	56.004	ENSIPUG00000022617	chd1l	100	55.727	Ictalurus_punctatus
ENSELUG00000016844	chd1l	85	52.440	ENSSTOG00000007032	CHD1L	96	53.037	Ictidomys_tridecemlineatus
ENSELUG00000016844	chd1l	99	60.135	ENSKMAG00000014358	chd1l	100	59.653	Kryptolebias_marmoratus
ENSELUG00000016844	chd1l	99	60.365	ENSLBEG00000023845	chd1l	100	60.656	Labrus_bergylta
ENSELUG00000016844	chd1l	99	49.327	ENSLACG00000006262	CHD1L	99	48.654	Latimeria_chalumnae
ENSELUG00000016844	chd1l	99	58.166	ENSLOCG00000010574	chd1l	99	58.671	Lepisosteus_oculatus
ENSELUG00000016844	chd1l	82	55.029	ENSLAFG00000018136	CHD1L	98	55.164	Loxodonta_africana
ENSELUG00000016844	chd1l	81	55.282	ENSMFAG00000043562	CHD1L	98	55.244	Macaca_fascicularis
ENSELUG00000016844	chd1l	83	55.184	ENSMMUG00000009024	CHD1L	89	62.388	Macaca_mulatta
ENSELUG00000016844	chd1l	83	55.184	ENSMNEG00000039905	CHD1L	95	55.145	Macaca_nemestrina
ENSELUG00000016844	chd1l	83	55.300	ENSMLEG00000030900	CHD1L	95	55.363	Mandrillus_leucophaeus
ENSELUG00000016844	chd1l	99	60.940	ENSMAMG00000012822	chd1l	100	60.794	Mastacembelus_armatus
ENSELUG00000016844	chd1l	93	60.515	ENSMZEG00005020830	chd1l	95	60.309	Maylandia_zebra
ENSELUG00000016844	chd1l	82	53.349	ENSMGAG00000014304	CHD1L	98	53.819	Meleagris_gallopavo
ENSELUG00000016844	chd1l	83	54.702	ENSMICG00000002497	CHD1L	99	54.545	Microcebus_murinus
ENSELUG00000016844	chd1l	85	54.157	ENSMOCG00000006305	Chd1l	96	54.857	Microtus_ochrogaster
ENSELUG00000016844	chd1l	84	57.780	ENSMMOG00000005964	chd1l	91	58.267	Mola_mola
ENSELUG00000016844	chd1l	86	53.429	ENSMODG00000018717	CHD1L	97	54.072	Monodelphis_domestica
ENSELUG00000016844	chd1l	99	61.928	ENSMALG00000014675	chd1l	99	61.397	Monopterus_albus
ENSELUG00000016844	chd1l	85	54.730	MGP_CAROLIEiJ_G0025401	Chd1l	96	55.275	Mus_caroli
ENSELUG00000016844	chd1l	84	54.413	ENSMUSG00000028089	Chd1l	96	55.353	Mus_musculus
ENSELUG00000016844	chd1l	85	55.040	MGP_PahariEiJ_G0026845	Chd1l	96	55.774	Mus_pahari
ENSELUG00000016844	chd1l	83	55.224	MGP_SPRETEiJ_G0026347	Chd1l	96	55.454	Mus_spretus
ENSELUG00000016844	chd1l	86	54.698	ENSMPUG00000000615	CHD1L	97	55.227	Mustela_putorius_furo
ENSELUG00000016844	chd1l	82	54.091	ENSMLUG00000007573	CHD1L	96	52.407	Myotis_lucifugus
ENSELUG00000016844	chd1l	83	51.339	ENSNGAG00000000908	Chd1l	96	52.432	Nannospalax_galili
ENSELUG00000016844	chd1l	84	58.409	ENSNBRG00000006021	chd1l	95	58.523	Neolamprologus_brichardi
ENSELUG00000016844	chd1l	83	54.630	ENSNLEG00000000179	CHD1L	95	54.630	Nomascus_leucogenys
ENSELUG00000016844	chd1l	72	54.649	ENSOPRG00000006973	CHD1L	86	54.649	Ochotona_princeps
ENSELUG00000016844	chd1l	83	52.414	ENSODEG00000002494	CHD1L	96	53.226	Octodon_degus
ENSELUG00000016844	chd1l	99	61.116	ENSONIG00000003183	chd1l	100	60.828	Oreochromis_niloticus
ENSELUG00000016844	chd1l	74	51.527	ENSOANG00000003068	CHD1L	93	52.296	Ornithorhynchus_anatinus
ENSELUG00000016844	chd1l	83	54.247	ENSOCUG00000009336	CHD1L	95	54.784	Oryctolagus_cuniculus
ENSELUG00000016844	chd1l	86	59.263	ENSORLG00000003673	chd1l	95	61.137	Oryzias_latipes
ENSELUG00000016844	chd1l	93	59.129	ENSORLG00020005123	chd1l	98	65.616	Oryzias_latipes_hni
ENSELUG00000016844	chd1l	93	59.025	ENSORLG00015001680	chd1l	98	61.530	Oryzias_latipes_hsok
ENSELUG00000016844	chd1l	86	57.143	ENSOMEG00000006109	chd1l	99	57.143	Oryzias_melastigma
ENSELUG00000016844	chd1l	84	55.644	ENSOGAG00000008775	CHD1L	95	56.236	Otolemur_garnettii
ENSELUG00000016844	chd1l	85	55.040	ENSOARG00000020547	CHD1L	97	56.738	Ovis_aries
ENSELUG00000016844	chd1l	82	55.076	ENSPPAG00000039193	CHD1L	98	54.945	Pan_paniscus
ENSELUG00000016844	chd1l	83	55.312	ENSPPRG00000010258	CHD1L	95	54.828	Panthera_pardus
ENSELUG00000016844	chd1l	83	54.965	ENSPTRG00000001220	CHD1L	95	55.168	Pan_troglodytes
ENSELUG00000016844	chd1l	82	55.504	ENSPANG00000009170	CHD1L	95	55.300	Papio_anubis
ENSELUG00000016844	chd1l	99	59.342	ENSPKIG00000022166	chd1l	99	59.245	Paramormyrops_kingsleyae
ENSELUG00000016844	chd1l	82	56.250	ENSPSIG00000012595	CHD1L	94	56.134	Pelodiscus_sinensis
ENSELUG00000016844	chd1l	84	54.328	ENSPEMG00000013528	Chd1l	96	54.857	Peromyscus_maniculatus_bairdii
ENSELUG00000016844	chd1l	80	52.745	ENSPCIG00000030409	CHD1L	98	53.837	Phascolarctos_cinereus
ENSELUG00000016844	chd1l	99	58.977	ENSPFOG00000015948	chd1l	100	58.784	Poecilia_formosa
ENSELUG00000016844	chd1l	99	59.270	ENSPLAG00000015145	chd1l	100	59.078	Poecilia_latipinna
ENSELUG00000016844	chd1l	93	58.908	ENSPMEG00000008720	chd1l	99	59.091	Poecilia_mexicana
ENSELUG00000016844	chd1l	84	62.240	ENSPREG00000017885	chd1l	98	61.998	Poecilia_reticulata
ENSELUG00000016844	chd1l	84	54.846	ENSPPYG00000000946	CHD1L	95	54.943	Pongo_abelii
ENSELUG00000016844	chd1l	78	51.225	ENSPCAG00000005959	CHD1L	91	51.640	Procavia_capensis
ENSELUG00000016844	chd1l	81	52.656	ENSPVAG00000006084	CHD1L	99	52.850	Pteropus_vampyrus
ENSELUG00000016844	chd1l	85	60.403	ENSPNYG00000013001	chd1l	97	61.180	Pundamilia_nyererei
ENSELUG00000016844	chd1l	99	58.198	ENSPNAG00000011881	chd1l	100	59.156	Pygocentrus_nattereri
ENSELUG00000016844	chd1l	84	53.735	ENSRNOG00000017669	Chd1l	96	55.263	Rattus_norvegicus
ENSELUG00000016844	chd1l	83	55.057	ENSRBIG00000041272	CHD1L	95	55.133	Rhinopithecus_bieti
ENSELUG00000016844	chd1l	82	54.925	ENSRROG00000041354	CHD1L	96	54.798	Rhinopithecus_roxellana
ENSELUG00000016844	chd1l	84	52.268	ENSSHAG00000017395	CHD1L	97	52.721	Sarcophilus_harrisii
ENSELUG00000016844	chd1l	93	60.412	ENSSFOG00015003649	chd1l	98	63.091	Scleropages_formosus
ENSELUG00000016844	chd1l	99	60.000	ENSSMAG00000019377	chd1l	100	59.714	Scophthalmus_maximus
ENSELUG00000016844	chd1l	82	63.380	ENSSDUG00000019831	chd1l	95	63.744	Seriola_dumerili
ENSELUG00000016844	chd1l	82	64.075	ENSSLDG00000012714	chd1l	95	64.193	Seriola_lalandi_dorsalis
ENSELUG00000016844	chd1l	86	52.444	ENSSPUG00000016865	CHD1L	98	53.054	Sphenodon_punctatus
ENSELUG00000016844	chd1l	93	61.364	ENSSPAG00000017653	chd1l	99	61.157	Stegastes_partitus
ENSELUG00000016844	chd1l	83	52.860	ENSSSCG00000006701	CHD1L	96	53.042	Sus_scrofa
ENSELUG00000016844	chd1l	82	54.042	ENSTGUG00000013392	-	98	54.461	Taeniopygia_guttata
ENSELUG00000016844	chd1l	82	55.425	ENSTNIG00000004902	chd1l	99	55.896	Tetraodon_nigroviridis
ENSELUG00000016844	chd1l	83	51.376	ENSTTRG00000011711	CHD1L	98	52.538	Tursiops_truncatus
ENSELUG00000016844	chd1l	85	53.691	ENSUAMG00000021991	CHD1L	98	54.668	Ursus_americanus
ENSELUG00000016844	chd1l	85	54.392	ENSUMAG00000009733	CHD1L	98	54.700	Ursus_maritimus
ENSELUG00000016844	chd1l	86	54.738	ENSVVUG00000007316	CHD1L	90	61.314	Vulpes_vulpes
ENSELUG00000016844	chd1l	97	57.470	ENSXCOG00000008336	chd1l	98	56.972	Xiphophorus_couchianus
ENSELUG00000016844	chd1l	99	59.749	ENSXMAG00000015898	chd1l	100	59.266	Xiphophorus_maculatus