EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017004 (Gene tree)
Gene ID: 105025003
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3972 bases
Position: chrAZJR03000126.1:328992-332963
Accession: 105025003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017243	Ribonuc_P_40	PF08584.11	4.1e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000026793	-	2085	XM_010895360	ENSELUP00000017243	361 (aa)	XP_010893662	UPI000576C5CD

Gene Model

Click here to download ENSELUG00000017004's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017004	rpp40	99	48.324	ENSG00000124787	RPP40	98	49.498	Homo_sapiens
ENSELUG00000017004	rpp40	89	43.478	ENSAPOG00000008660	rpp40	92	43.478	Acanthochromis_polyacanthus
ENSELUG00000017004	rpp40	99	47.765	ENSAMEG00000012938	RPP40	98	47.765	Ailuropoda_melanoleuca
ENSELUG00000017004	rpp40	99	47.922	ENSACIG00000003617	rpp40	98	47.922	Amphilophus_citrinellus
ENSELUG00000017004	rpp40	100	50.416	ENSAOCG00000011846	rpp40	100	50.416	Amphiprion_ocellaris
ENSELUG00000017004	rpp40	100	50.416	ENSAPEG00000001322	rpp40	100	50.416	Amphiprion_percula
ENSELUG00000017004	rpp40	99	50.696	ENSATEG00000006584	rpp40	99	50.975	Anabas_testudineus
ENSELUG00000017004	rpp40	83	52.649	ENSAPLG00000005691	RPP40	99	52.649	Anas_platyrhynchos
ENSELUG00000017004	rpp40	99	49.300	ENSACAG00000006550	RPP40	87	49.300	Anolis_carolinensis
ENSELUG00000017004	rpp40	99	47.207	ENSANAG00000029246	RPP40	98	47.207	Aotus_nancymaae
ENSELUG00000017004	rpp40	97	51.282	ENSACLG00000015883	rpp40	95	51.282	Astatotilapia_calliptera
ENSELUG00000017004	rpp40	100	58.449	ENSAMXG00000001755	rpp40	100	58.449	Astyanax_mexicanus
ENSELUG00000017004	rpp40	99	48.883	ENSBTAG00000003332	RPP40	98	48.883	Bos_taurus
ENSELUG00000017004	rpp40	99	47.486	ENSCJAG00000021373	RPP40	98	47.486	Callithrix_jacchus
ENSELUG00000017004	rpp40	99	47.486	ENSCAFG00000009435	RPP40	98	47.486	Canis_familiaris
ENSELUG00000017004	rpp40	99	47.486	ENSCAFG00020013380	RPP40	98	47.486	Canis_lupus_dingo
ENSELUG00000017004	rpp40	99	48.603	ENSCHIG00000016849	RPP40	99	49.007	Capra_hircus
ENSELUG00000017004	rpp40	99	48.324	ENSTSYG00000032857	RPP40	98	48.829	Carlito_syrichta
ENSELUG00000017004	rpp40	89	43.344	ENSCAPG00000004957	RPP40	96	43.344	Cavia_aperea
ENSELUG00000017004	rpp40	99	48.468	ENSCPOG00000005855	RPP40	99	48.468	Cavia_porcellus
ENSELUG00000017004	rpp40	99	47.207	ENSCCAG00000019809	RPP40	98	47.207	Cebus_capucinus
ENSELUG00000017004	rpp40	99	48.045	ENSCATG00000038787	RPP40	98	48.045	Cercocebus_atys
ENSELUG00000017004	rpp40	99	48.747	ENSCLAG00000003235	RPP40	99	48.747	Chinchilla_lanigera
ENSELUG00000017004	rpp40	99	48.324	ENSCSAG00000007307	RPP40	98	48.324	Chlorocebus_sabaeus
ENSELUG00000017004	rpp40	69	42.800	ENSCHOG00000005856	-	100	42.800	Choloepus_hoffmanni
ENSELUG00000017004	rpp40	99	51.397	ENSCPBG00000009003	RPP40	98	51.397	Chrysemys_picta_bellii
ENSELUG00000017004	rpp40	99	48.045	ENSCANG00000033965	RPP40	98	48.045	Colobus_angolensis_palliatus
ENSELUG00000017004	rpp40	99	48.324	ENSCGRG00001018328	Rpp40	98	48.324	Cricetulus_griseus_chok1gshd
ENSELUG00000017004	rpp40	99	48.324	ENSCGRG00000011344	Rpp40	98	48.324	Cricetulus_griseus_crigri
ENSELUG00000017004	rpp40	98	47.753	ENSCSEG00000015006	-	98	48.034	Cynoglossus_semilaevis
ENSELUG00000017004	rpp40	75	42.909	ENSCVAG00000012169	rpp40	100	43.636	Cyprinodon_variegatus
ENSELUG00000017004	rpp40	100	65.097	ENSDARG00000017605	rpp40	100	65.097	Danio_rerio
ENSELUG00000017004	rpp40	81	46.233	ENSDNOG00000048136	RPP40	98	46.233	Dasypus_novemcinctus
ENSELUG00000017004	rpp40	99	37.637	ENSDORG00000011196	-	98	37.637	Dipodomys_ordii
ENSELUG00000017004	rpp40	99	48.045	ENSDORG00000029944	-	98	48.045	Dipodomys_ordii
ENSELUG00000017004	rpp40	99	38.655	ENSETEG00000007458	RPP40	98	38.655	Echinops_telfairi
ENSELUG00000017004	rpp40	99	44.722	ENSEBUG00000000386	rpp40	99	44.272	Eptatretus_burgeri
ENSELUG00000017004	rpp40	99	48.324	ENSEASG00005012116	RPP40	79	48.324	Equus_asinus_asinus
ENSELUG00000017004	rpp40	99	48.324	ENSECAG00000017247	RPP40	79	48.324	Equus_caballus
ENSELUG00000017004	rpp40	80	38.621	ENSEEUG00000012087	RPP40	97	38.621	Erinaceus_europaeus
ENSELUG00000017004	rpp40	99	48.324	ENSFCAG00000009249	RPP40	98	48.324	Felis_catus
ENSELUG00000017004	rpp40	86	52.000	ENSFALG00000013166	RPP40	99	52.000	Ficedula_albicollis
ENSELUG00000017004	rpp40	81	40.753	ENSFDAG00000000265	-	99	40.753	Fukomys_damarensis
ENSELUG00000017004	rpp40	99	49.304	ENSFDAG00000013001	-	99	49.304	Fukomys_damarensis
ENSELUG00000017004	rpp40	100	49.584	ENSFHEG00000021429	rpp40	89	49.584	Fundulus_heteroclitus
ENSELUG00000017004	rpp40	89	45.652	ENSGMOG00000018653	rpp40	100	45.652	Gadus_morhua
ENSELUG00000017004	rpp40	99	51.397	ENSGALG00000036074	RPP40	98	51.397	Gallus_gallus
ENSELUG00000017004	rpp40	84	40.594	ENSGAFG00000004189	-	100	40.594	Gambusia_affinis
ENSELUG00000017004	rpp40	100	51.247	ENSGACG00000002472	rpp40	100	51.247	Gasterosteus_aculeatus
ENSELUG00000017004	rpp40	99	52.514	ENSGAGG00000012918	RPP40	98	52.514	Gopherus_agassizii
ENSELUG00000017004	rpp40	99	48.603	ENSGGOG00000013764	RPP40	98	48.603	Gorilla_gorilla
ENSELUG00000017004	rpp40	91	48.930	ENSHBUG00000009378	rpp40	93	48.930	Haplochromis_burtoni
ENSELUG00000017004	rpp40	99	50.139	ENSHGLG00000004871	RPP40	99	50.139	Heterocephalus_glaber_female
ENSELUG00000017004	rpp40	99	50.139	ENSHGLG00100002080	RPP40	99	50.139	Heterocephalus_glaber_male
ENSELUG00000017004	rpp40	96	42.816	ENSHCOG00000013264	-	93	42.816	Hippocampus_comes
ENSELUG00000017004	rpp40	100	65.651	ENSIPUG00000008951	RPP40	100	65.651	Ictalurus_punctatus
ENSELUG00000017004	rpp40	99	48.324	ENSSTOG00000011199	RPP40	98	48.324	Ictidomys_tridecemlineatus
ENSELUG00000017004	rpp40	99	47.486	ENSJJAG00000020629	Rpp40	98	47.486	Jaculus_jaculus
ENSELUG00000017004	rpp40	100	47.091	ENSKMAG00000019358	rpp40	100	47.091	Kryptolebias_marmoratus
ENSELUG00000017004	rpp40	100	52.632	ENSLBEG00000022724	rpp40	100	52.632	Labrus_bergylta
ENSELUG00000017004	rpp40	100	51.515	ENSLACG00000014848	RPP40	100	51.515	Latimeria_chalumnae
ENSELUG00000017004	rpp40	100	58.564	ENSLOCG00000011650	rpp40	99	58.564	Lepisosteus_oculatus
ENSELUG00000017004	rpp40	83	50.502	ENSLAFG00000007530	RPP40	98	50.502	Loxodonta_africana
ENSELUG00000017004	rpp40	99	47.486	ENSMFAG00000043100	RPP40	98	47.486	Macaca_fascicularis
ENSELUG00000017004	rpp40	99	47.765	ENSMMUG00000004966	RPP40	98	47.765	Macaca_mulatta
ENSELUG00000017004	rpp40	99	47.765	ENSMNEG00000041986	RPP40	98	48.829	Macaca_nemestrina
ENSELUG00000017004	rpp40	99	42.458	ENSMLEG00000040851	RPP40	100	50.000	Mandrillus_leucophaeus
ENSELUG00000017004	rpp40	100	51.801	ENSMAMG00000019551	rpp40	99	51.801	Mastacembelus_armatus
ENSELUG00000017004	rpp40	99	51.541	ENSMZEG00005019475	rpp40	99	51.541	Maylandia_zebra
ENSELUG00000017004	rpp40	89	54.180	ENSMGAG00000004009	RPP40	89	54.180	Meleagris_gallopavo
ENSELUG00000017004	rpp40	99	48.603	ENSMAUG00000010268	Rpp40	98	48.603	Mesocricetus_auratus
ENSELUG00000017004	rpp40	99	49.441	ENSMICG00000003297	RPP40	98	45.531	Microcebus_murinus
ENSELUG00000017004	rpp40	99	48.045	ENSMOCG00000000305	Rpp40	98	48.045	Microtus_ochrogaster
ENSELUG00000017004	rpp40	100	44.044	ENSMMOG00000020591	-	100	44.044	Mola_mola
ENSELUG00000017004	rpp40	99	49.721	ENSMODG00000009826	RPP40	98	49.721	Monodelphis_domestica
ENSELUG00000017004	rpp40	100	51.524	ENSMALG00000020133	rpp40	100	51.524	Monopterus_albus
ENSELUG00000017004	rpp40	99	48.324	MGP_CAROLIEiJ_G0018429	Rpp40	98	48.324	Mus_caroli
ENSELUG00000017004	rpp40	99	48.324	ENSMUSG00000021418	Rpp40	98	48.324	Mus_musculus
ENSELUG00000017004	rpp40	99	48.883	MGP_PahariEiJ_G0019497	Rpp40	98	48.883	Mus_pahari
ENSELUG00000017004	rpp40	99	48.045	MGP_SPRETEiJ_G0019309	Rpp40	98	48.045	Mus_spretus
ENSELUG00000017004	rpp40	99	47.765	ENSMPUG00000000530	RPP40	92	47.765	Mustela_putorius_furo
ENSELUG00000017004	rpp40	99	49.162	ENSMLUG00000000501	RPP40	98	49.162	Myotis_lucifugus
ENSELUG00000017004	rpp40	94	42.522	ENSNGAG00000022529	-	98	42.522	Nannospalax_galili
ENSELUG00000017004	rpp40	99	47.486	ENSNGAG00000023955	-	98	47.486	Nannospalax_galili
ENSELUG00000017004	rpp40	88	47.988	ENSNBRG00000017465	rpp40	86	48.012	Neolamprologus_brichardi
ENSELUG00000017004	rpp40	99	48.603	ENSNLEG00000034397	RPP40	98	48.603	Nomascus_leucogenys
ENSELUG00000017004	rpp40	99	43.575	ENSMEUG00000005300	RPP40	98	43.575	Notamacropus_eugenii
ENSELUG00000017004	rpp40	100	49.171	ENSODEG00000007255	-	99	49.171	Octodon_degus
ENSELUG00000017004	rpp40	99	46.369	ENSODEG00000018153	-	98	46.369	Octodon_degus
ENSELUG00000017004	rpp40	89	44.892	ENSODEG00000006170	-	100	44.892	Octodon_degus
ENSELUG00000017004	rpp40	99	50.980	ENSONIG00000014016	rpp40	98	50.980	Oreochromis_niloticus
ENSELUG00000017004	rpp40	83	52.333	ENSOANG00000001200	RPP40	98	52.333	Ornithorhynchus_anatinus
ENSELUG00000017004	rpp40	98	48.315	ENSOCUG00000000354	RPP40	98	48.315	Oryctolagus_cuniculus
ENSELUG00000017004	rpp40	99	47.619	ENSORLG00000008242	-	99	47.619	Oryzias_latipes
ENSELUG00000017004	rpp40	99	47.899	ENSORLG00020013745	-	90	47.899	Oryzias_latipes_hni
ENSELUG00000017004	rpp40	99	47.619	ENSORLG00015000887	-	99	47.619	Oryzias_latipes_hsok
ENSELUG00000017004	rpp40	99	49.860	ENSOMEG00000002747	rpp40	99	49.860	Oryzias_melastigma
ENSELUG00000017004	rpp40	99	48.883	ENSOGAG00000006055	RPP40	98	48.883	Otolemur_garnettii
ENSELUG00000017004	rpp40	89	47.531	ENSOARG00000018783	RPP40	99	48.675	Ovis_aries
ENSELUG00000017004	rpp40	99	48.324	ENSPPAG00000023703	RPP40	98	48.324	Pan_paniscus
ENSELUG00000017004	rpp40	99	48.045	ENSPPRG00000005612	RPP40	98	48.045	Panthera_pardus
ENSELUG00000017004	rpp40	99	45.251	ENSPTIG00000018847	RPP40	98	45.251	Panthera_tigris_altaica
ENSELUG00000017004	rpp40	99	48.324	ENSPTRG00000017690	RPP40	98	48.324	Pan_troglodytes
ENSELUG00000017004	rpp40	99	47.486	ENSPANG00000017865	RPP40	98	47.486	Papio_anubis
ENSELUG00000017004	rpp40	100	60.942	ENSPKIG00000006311	rpp40	100	60.942	Paramormyrops_kingsleyae
ENSELUG00000017004	rpp40	61	49.327	ENSPSIG00000007854	RPP40	100	49.327	Pelodiscus_sinensis
ENSELUG00000017004	rpp40	92	41.317	ENSPEMG00000020809	Rpp40	90	41.317	Peromyscus_maniculatus_bairdii
ENSELUG00000017004	rpp40	76	43.066	ENSPMAG00000008412	rpp40	99	43.066	Petromyzon_marinus
ENSELUG00000017004	rpp40	99	49.721	ENSPCIG00000010682	RPP40	98	49.721	Phascolarctos_cinereus
ENSELUG00000017004	rpp40	100	44.353	ENSPFOG00000011460	rpp40	99	44.353	Poecilia_formosa
ENSELUG00000017004	rpp40	100	44.321	ENSPLAG00000001334	rpp40	100	44.321	Poecilia_latipinna
ENSELUG00000017004	rpp40	100	45.152	ENSPMEG00000007721	rpp40	100	45.152	Poecilia_mexicana
ENSELUG00000017004	rpp40	100	45.429	ENSPREG00000009215	rpp40	100	45.429	Poecilia_reticulata
ENSELUG00000017004	rpp40	99	48.045	ENSPPYG00000016194	RPP40	98	48.045	Pongo_abelii
ENSELUG00000017004	rpp40	99	47.765	ENSPCOG00000003907	RPP40	98	47.765	Propithecus_coquereli
ENSELUG00000017004	rpp40	99	48.883	ENSPVAG00000011325	RPP40	98	48.883	Pteropus_vampyrus
ENSELUG00000017004	rpp40	84	48.185	ENSPNYG00000004432	rpp40	100	48.185	Pundamilia_nyererei
ENSELUG00000017004	rpp40	100	59.003	ENSPNAG00000019125	rpp40	100	59.003	Pygocentrus_nattereri
ENSELUG00000017004	rpp40	99	48.883	ENSRNOG00000016226	Rpp40	98	49.833	Rattus_norvegicus
ENSELUG00000017004	rpp40	99	47.765	ENSRBIG00000035800	RPP40	98	48.829	Rhinopithecus_bieti
ENSELUG00000017004	rpp40	99	47.765	ENSRROG00000039116	RPP40	98	47.765	Rhinopithecus_roxellana
ENSELUG00000017004	rpp40	99	46.927	ENSSBOG00000020297	RPP40	98	46.927	Saimiri_boliviensis_boliviensis
ENSELUG00000017004	rpp40	76	50.909	ENSSHAG00000002102	RPP40	99	50.909	Sarcophilus_harrisii
ENSELUG00000017004	rpp40	100	63.435	ENSSFOG00015001142	rpp40	81	63.435	Scleropages_formosus
ENSELUG00000017004	rpp40	99	51.821	ENSSDUG00000007202	rpp40	99	51.821	Seriola_dumerili
ENSELUG00000017004	rpp40	99	51.541	ENSSLDG00000017563	rpp40	99	51.541	Seriola_lalandi_dorsalis
ENSELUG00000017004	rpp40	99	51.117	ENSSPUG00000017487	-	98	51.117	Sphenodon_punctatus
ENSELUG00000017004	rpp40	82	50.338	ENSSPUG00000018950	-	100	50.338	Sphenodon_punctatus
ENSELUG00000017004	rpp40	100	50.693	ENSSPAG00000022716	rpp40	100	50.693	Stegastes_partitus
ENSELUG00000017004	rpp40	99	45.810	ENSSSCG00000000998	RPP40	99	45.545	Sus_scrofa
ENSELUG00000017004	rpp40	99	51.955	ENSTGUG00000002258	-	99	51.955	Taeniopygia_guttata
ENSELUG00000017004	rpp40	99	50.420	ENSTRUG00000003755	rpp40	99	50.420	Takifugu_rubripes
ENSELUG00000017004	rpp40	100	47.922	ENSTNIG00000003077	rpp40	100	47.922	Tetraodon_nigroviridis
ENSELUG00000017004	rpp40	69	35.060	ENSTBEG00000014467	-	73	35.060	Tupaia_belangeri
ENSELUG00000017004	rpp40	100	42.818	ENSTTRG00000007319	RPP40	99	42.818	Tursiops_truncatus
ENSELUG00000017004	rpp40	99	47.486	ENSUAMG00000002159	RPP40	98	48.161	Ursus_americanus
ENSELUG00000017004	rpp40	99	47.486	ENSUMAG00000018639	RPP40	92	47.486	Ursus_maritimus
ENSELUG00000017004	rpp40	71	34.630	ENSVPAG00000004652	-	89	34.630	Vicugna_pacos
ENSELUG00000017004	rpp40	99	47.765	ENSVVUG00000005451	RPP40	98	47.765	Vulpes_vulpes
ENSELUG00000017004	rpp40	100	49.311	ENSXETG00000017617	rpp40	100	49.311	Xenopus_tropicalis
ENSELUG00000017004	rpp40	100	34.066	ENSXMAG00000024940	rpp40	99	34.066	Xiphophorus_maculatus