EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017029 (Gene tree)
Gene ID: 105025007
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8912 bases
Position: chrAZJR03000126.1:319108-328019
Accession: 105025007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017314	RIO1	PF01163.22	1.4e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000040128	-	3506	XM_010895365	ENSELUP00000017314	547 (aa)	XP_010893667	UPI0005774F07

Gene Model

Click here to download ENSELUG00000017029's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017029	riok1	99	63.993	ENSG00000124784	RIOK1	99	65.088	Homo_sapiens
ENSELUG00000017029	riok1	56	71.565	ENSAPOG00000015632	riok1	99	70.927	Acanthochromis_polyacanthus
ENSELUG00000017029	riok1	99	67.851	ENSAMEG00000017367	RIOK1	99	66.963	Ailuropoda_melanoleuca
ENSELUG00000017029	riok1	88	76.591	ENSACIG00000003735	riok1	88	77.131	Amphilophus_citrinellus
ENSELUG00000017029	riok1	99	72.202	ENSAOCG00000011818	riok1	100	71.841	Amphiprion_ocellaris
ENSELUG00000017029	riok1	99	72.383	ENSAPEG00000001345	riok1	100	72.022	Amphiprion_percula
ENSELUG00000017029	riok1	82	75.330	ENSATEG00000006594	riok1	99	74.670	Anabas_testudineus
ENSELUG00000017029	riok1	84	72.881	ENSAPLG00000004196	RIOK1	100	70.747	Anas_platyrhynchos
ENSELUG00000017029	riok1	99	68.440	ENSACAG00000000695	RIOK1	99	68.440	Anolis_carolinensis
ENSELUG00000017029	riok1	99	57.043	ENSANAG00000023777	RIOK1	99	56.842	Aotus_nancymaae
ENSELUG00000017029	riok1	100	71.892	ENSACLG00000015799	riok1	100	71.583	Astatotilapia_calliptera
ENSELUG00000017029	riok1	99	73.380	ENSAMXG00000015286	riok1	99	71.256	Astyanax_mexicanus
ENSELUG00000017029	riok1	99	66.904	ENSBTAG00000013821	RIOK1	99	64.757	Bos_taurus
ENSELUG00000017029	riok1	99	65.505	ENSCJAG00000042960	RIOK1	99	65.439	Callithrix_jacchus
ENSELUG00000017029	riok1	87	72.819	ENSCAFG00000009563	RIOK1	99	66.252	Canis_familiaris
ENSELUG00000017029	riok1	82	71.706	ENSCAFG00020013233	RIOK1	86	69.917	Canis_lupus_dingo
ENSELUG00000017029	riok1	99	66.548	ENSCHIG00000001534	RIOK1	99	66.548	Capra_hircus
ENSELUG00000017029	riok1	66	70.292	ENSTSYG00000011368	RIOK1	100	68.807	Carlito_syrichta
ENSELUG00000017029	riok1	80	72.444	ENSCAPG00000008489	RIOK1	100	71.949	Cavia_aperea
ENSELUG00000017029	riok1	97	66.849	ENSCPOG00000009882	RIOK1	99	66.489	Cavia_porcellus
ENSELUG00000017029	riok1	99	66.312	ENSCCAG00000024061	RIOK1	99	64.912	Cebus_capucinus
ENSELUG00000017029	riok1	99	66.961	ENSCATG00000001548	RIOK1	99	66.375	Cercocebus_atys
ENSELUG00000017029	riok1	99	66.252	ENSCLAG00000003522	RIOK1	99	66.075	Chinchilla_lanigera
ENSELUG00000017029	riok1	93	63.158	ENSCSAG00000007396	RIOK1	89	68.443	Chlorocebus_sabaeus
ENSELUG00000017029	riok1	88	70.807	ENSCPBG00000008685	RIOK1	82	70.928	Chrysemys_picta_bellii
ENSELUG00000017029	riok1	99	64.395	ENSCANG00000032919	RIOK1	99	66.434	Colobus_angolensis_palliatus
ENSELUG00000017029	riok1	99	66.081	ENSCGRG00001018868	Riok1	99	65.248	Cricetulus_griseus_chok1gshd
ENSELUG00000017029	riok1	99	66.081	ENSCGRG00000008015	Riok1	99	65.248	Cricetulus_griseus_crigri
ENSELUG00000017029	riok1	88	52.439	ENSCSEG00000015014	riok1	86	51.429	Cynoglossus_semilaevis
ENSELUG00000017029	riok1	57	64.742	ENSCVAG00000011291	riok1	99	66.561	Cyprinodon_variegatus
ENSELUG00000017029	riok1	99	73.609	ENSDARG00000016399	riok1	100	73.703	Danio_rerio
ENSELUG00000017029	riok1	99	66.138	ENSDNOG00000015813	RIOK1	99	65.734	Dasypus_novemcinctus
ENSELUG00000017029	riok1	99	65.554	ENSDORG00000008530	Riok1	99	64.888	Dipodomys_ordii
ENSELUG00000017029	riok1	81	54.839	FBgn0036187	RIOK1	78	52.350	Drosophila_melanogaster
ENSELUG00000017029	riok1	100	66.195	ENSETEG00000020273	RIOK1	99	65.957	Echinops_telfairi
ENSELUG00000017029	riok1	99	59.855	ENSEBUG00000013672	riok1	98	59.123	Eptatretus_burgeri
ENSELUG00000017029	riok1	95	65.363	ENSEASG00005012032	RIOK1	85	69.388	Equus_asinus_asinus
ENSELUG00000017029	riok1	99	66.028	ENSECAG00000009007	RIOK1	99	64.888	Equus_caballus
ENSELUG00000017029	riok1	75	63.915	ENSEEUG00000007123	RIOK1	90	66.076	Erinaceus_europaeus
ENSELUG00000017029	riok1	99	67.257	ENSFCAG00000027290	RIOK1	99	66.195	Felis_catus
ENSELUG00000017029	riok1	100	67.021	ENSFALG00000013244	RIOK1	99	66.608	Ficedula_albicollis
ENSELUG00000017029	riok1	99	65.841	ENSFDAG00000019139	RIOK1	99	65.018	Fukomys_damarensis
ENSELUG00000017029	riok1	80	73.288	ENSFHEG00000021419	riok1	98	72.062	Fundulus_heteroclitus
ENSELUG00000017029	riok1	74	80.147	ENSGMOG00000018668	riok1	94	80.597	Gadus_morhua
ENSELUG00000017029	riok1	57	64.615	ENSGALG00000012795	RIOK1	100	64.615	Gallus_gallus
ENSELUG00000017029	riok1	84	63.636	ENSGAFG00000004091	riok1	79	63.597	Gambusia_affinis
ENSELUG00000017029	riok1	97	70.599	ENSGACG00000002496	riok1	94	78.306	Gasterosteus_aculeatus
ENSELUG00000017029	riok1	83	70.833	ENSGAGG00000002262	RIOK1	96	70.130	Gopherus_agassizii
ENSELUG00000017029	riok1	100	56.522	ENSGGOG00000011037	RIOK1	99	59.541	Gorilla_gorilla
ENSELUG00000017029	riok1	99	65.714	ENSHGLG00000008699	RIOK1	99	65.116	Heterocephalus_glaber_female
ENSELUG00000017029	riok1	99	65.832	ENSHGLG00100008188	RIOK1	99	65.295	Heterocephalus_glaber_male
ENSELUG00000017029	riok1	88	73.077	ENSHCOG00000013275	riok1	90	73.814	Hippocampus_comes
ENSELUG00000017029	riok1	99	73.890	ENSIPUG00000003290	riok1	100	73.982	Ictalurus_punctatus
ENSELUG00000017029	riok1	100	66.195	ENSSTOG00000009289	RIOK1	99	66.785	Ictidomys_tridecemlineatus
ENSELUG00000017029	riok1	99	66.370	ENSJJAG00000015152	Riok1	99	65.905	Jaculus_jaculus
ENSELUG00000017029	riok1	70	76.864	ENSKMAG00000019378	riok1	100	76.864	Kryptolebias_marmoratus
ENSELUG00000017029	riok1	88	78.819	ENSLBEG00000016650	riok1	86	79.545	Labrus_bergylta
ENSELUG00000017029	riok1	99	61.744	ENSLACG00000000300	RIOK1	99	61.348	Latimeria_chalumnae
ENSELUG00000017029	riok1	99	72.352	ENSLOCG00000011728	riok1	99	72.122	Lepisosteus_oculatus
ENSELUG00000017029	riok1	99	67.870	ENSLAFG00000005504	RIOK1	99	67.318	Loxodonta_africana
ENSELUG00000017029	riok1	99	65.511	ENSMFAG00000029990	RIOK1	99	66.200	Macaca_fascicularis
ENSELUG00000017029	riok1	99	65.338	ENSMMUG00000015577	RIOK1	99	66.025	Macaca_mulatta
ENSELUG00000017029	riok1	99	63.176	ENSMNEG00000034396	RIOK1	94	69.420	Macaca_nemestrina
ENSELUG00000017029	riok1	99	66.549	ENSMLEG00000026327	RIOK1	99	66.550	Mandrillus_leucophaeus
ENSELUG00000017029	riok1	100	71.532	ENSMAMG00000019557	riok1	100	71.892	Mastacembelus_armatus
ENSELUG00000017029	riok1	100	71.712	ENSMZEG00005019482	riok1	100	71.403	Maylandia_zebra
ENSELUG00000017029	riok1	99	68.515	ENSMGAG00000003816	RIOK1	99	68.571	Meleagris_gallopavo
ENSELUG00000017029	riok1	99	66.843	ENSMAUG00000012751	Riok1	99	66.140	Mesocricetus_auratus
ENSELUG00000017029	riok1	99	65.854	ENSMICG00000044301	RIOK1	83	66.370	Microcebus_murinus
ENSELUG00000017029	riok1	99	65.780	ENSMOCG00000017032	Riok1	99	64.184	Microtus_ochrogaster
ENSELUG00000017029	riok1	84	69.277	ENSMMOG00000020598	riok1	87	68.474	Mola_mola
ENSELUG00000017029	riok1	87	72.245	ENSMODG00000009964	RIOK1	99	67.496	Monodelphis_domestica
ENSELUG00000017029	riok1	84	70.753	ENSMALG00000019982	riok1	89	70.108	Monopterus_albus
ENSELUG00000017029	riok1	99	64.956	MGP_CAROLIEiJ_G0018439	Riok1	99	64.261	Mus_caroli
ENSELUG00000017029	riok1	99	64.956	ENSMUSG00000021428	Riok1	99	66.019	Mus_musculus
ENSELUG00000017029	riok1	99	64.085	MGP_PahariEiJ_G0019507	Riok1	99	64.134	Mus_pahari
ENSELUG00000017029	riok1	99	65.364	MGP_SPRETEiJ_G0019319	Riok1	99	64.789	Mus_spretus
ENSELUG00000017029	riok1	99	67.730	ENSMPUG00000000570	RIOK1	99	66.844	Mustela_putorius_furo
ENSELUG00000017029	riok1	99	68.384	ENSMLUG00000015312	RIOK1	99	67.673	Myotis_lucifugus
ENSELUG00000017029	riok1	99	66.903	ENSNGAG00000021734	Riok1	99	65.897	Nannospalax_galili
ENSELUG00000017029	riok1	72	83.544	ENSNBRG00000017489	riok1	76	83.544	Neolamprologus_brichardi
ENSELUG00000017029	riok1	99	60.799	ENSNLEG00000011621	RIOK1	99	60.180	Nomascus_leucogenys
ENSELUG00000017029	riok1	73	58.958	ENSMEUG00000006679	-	72	58.958	Notamacropus_eugenii
ENSELUG00000017029	riok1	65	71.549	ENSOPRG00000009524	RIOK1	96	71.549	Ochotona_princeps
ENSELUG00000017029	riok1	72	58.543	ENSODEG00000005663	RIOK1	98	58.458	Octodon_degus
ENSELUG00000017029	riok1	100	70.863	ENSONIG00000014010	riok1	99	71.403	Oreochromis_niloticus
ENSELUG00000017029	riok1	82	73.060	ENSOANG00000012553	RIOK1	100	73.060	Ornithorhynchus_anatinus
ENSELUG00000017029	riok1	99	67.082	ENSOCUG00000011824	RIOK1	99	66.316	Oryctolagus_cuniculus
ENSELUG00000017029	riok1	100	71.739	ENSORLG00000008221	riok1	100	71.014	Oryzias_latipes
ENSELUG00000017029	riok1	99	70.000	ENSORLG00020013838	riok1	70	70.092	Oryzias_latipes_hni
ENSELUG00000017029	riok1	100	72.414	ENSORLG00015009817	riok1	99	72.182	Oryzias_latipes_hsok
ENSELUG00000017029	riok1	100	71.739	ENSOMEG00000002758	riok1	89	71.739	Oryzias_melastigma
ENSELUG00000017029	riok1	100	60.453	ENSOGAG00000010192	RIOK1	99	63.196	Otolemur_garnettii
ENSELUG00000017029	riok1	99	67.673	ENSOARG00000017747	RIOK1	99	66.370	Ovis_aries
ENSELUG00000017029	riok1	100	56.176	ENSPPAG00000016349	RIOK1	100	65.409	Pan_paniscus
ENSELUG00000017029	riok1	100	66.667	ENSPPRG00000001932	RIOK1	99	66.195	Panthera_pardus
ENSELUG00000017029	riok1	100	66.843	ENSPTIG00000018545	RIOK1	99	66.372	Panthera_tigris_altaica
ENSELUG00000017029	riok1	99	63.993	ENSPTRG00000017700	RIOK1	99	65.088	Pan_troglodytes
ENSELUG00000017029	riok1	99	65.858	ENSPANG00000016522	RIOK1	99	66.550	Papio_anubis
ENSELUG00000017029	riok1	99	74.819	ENSPKIG00000006442	riok1	100	74.638	Paramormyrops_kingsleyae
ENSELUG00000017029	riok1	99	68.929	ENSPSIG00000006488	RIOK1	97	69.326	Pelodiscus_sinensis
ENSELUG00000017029	riok1	75	72.372	ENSPMGG00000017807	riok1	96	69.944	Periophthalmus_magnuspinnatus
ENSELUG00000017029	riok1	87	70.994	ENSPEMG00000017844	Riok1	99	64.448	Peromyscus_maniculatus_bairdii
ENSELUG00000017029	riok1	73	65.133	ENSPMAG00000006351	riok1	98	65.375	Petromyzon_marinus
ENSELUG00000017029	riok1	81	72.222	ENSPCIG00000012653	RIOK1	86	69.959	Phascolarctos_cinereus
ENSELUG00000017029	riok1	99	66.483	ENSPFOG00000011532	riok1	100	65.209	Poecilia_formosa
ENSELUG00000017029	riok1	99	66.114	ENSPLAG00000001341	riok1	100	65.027	Poecilia_latipinna
ENSELUG00000017029	riok1	99	66.667	ENSPMEG00000007710	riok1	100	65.392	Poecilia_mexicana
ENSELUG00000017029	riok1	99	66.851	ENSPREG00000009237	riok1	100	65.392	Poecilia_reticulata
ENSELUG00000017029	riok1	99	67.140	ENSPPYG00000016207	RIOK1	99	66.075	Pongo_abelii
ENSELUG00000017029	riok1	99	59.680	ENSPCAG00000007892	RIOK1	99	57.876	Procavia_capensis
ENSELUG00000017029	riok1	99	68.319	ENSPVAG00000014091	RIOK1	99	65.445	Pteropus_vampyrus
ENSELUG00000017029	riok1	57	73.968	ENSPNYG00000004465	riok1	100	73.418	Pundamilia_nyererei
ENSELUG00000017029	riok1	99	73.890	ENSPNAG00000015435	riok1	99	75.404	Pygocentrus_nattereri
ENSELUG00000017029	riok1	99	64.956	ENSRNOG00000014049	Riok1	100	71.552	Rattus_norvegicus
ENSELUG00000017029	riok1	99	64.566	ENSRBIG00000036685	RIOK1	99	66.608	Rhinopithecus_bieti
ENSELUG00000017029	riok1	99	64.566	ENSRROG00000036611	RIOK1	99	66.608	Rhinopithecus_roxellana
ENSELUG00000017029	riok1	62	39.410	YOR119C	RIO1	72	39.410	Saccharomyces_cerevisiae
ENSELUG00000017029	riok1	99	65.854	ENSSBOG00000012588	RIOK1	99	65.789	Saimiri_boliviensis_boliviensis
ENSELUG00000017029	riok1	74	76.039	ENSSHAG00000003091	RIOK1	92	70.539	Sarcophilus_harrisii
ENSELUG00000017029	riok1	100	72.302	ENSSFOG00015001035	riok1	100	72.302	Scleropages_formosus
ENSELUG00000017029	riok1	57	69.841	ENSSDUG00000007291	riok1	100	70.159	Seriola_dumerili
ENSELUG00000017029	riok1	100	73.827	ENSSLDG00000017657	riok1	100	73.466	Seriola_lalandi_dorsalis
ENSELUG00000017029	riok1	82	65.055	ENSSPUG00000007624	RIOK1	81	63.913	Sphenodon_punctatus
ENSELUG00000017029	riok1	99	72.445	ENSSPAG00000022710	riok1	100	71.767	Stegastes_partitus
ENSELUG00000017029	riok1	100	66.197	ENSSSCG00000001024	RIOK1	99	64.499	Sus_scrofa
ENSELUG00000017029	riok1	100	67.077	ENSTGUG00000002331	RIOK1	99	66.021	Taeniopygia_guttata
ENSELUG00000017029	riok1	51	67.491	ENSTRUG00000001575	-	100	67.138	Takifugu_rubripes
ENSELUG00000017029	riok1	80	60.134	ENSTRUG00000002854	riok1	94	65.526	Takifugu_rubripes
ENSELUG00000017029	riok1	100	64.937	ENSTNIG00000003078	riok1	99	64.222	Tetraodon_nigroviridis
ENSELUG00000017029	riok1	99	63.573	ENSTBEG00000016730	RIOK1	99	64.448	Tupaia_belangeri
ENSELUG00000017029	riok1	70	78.351	ENSTTRG00000017335	RIOK1	81	78.351	Tursiops_truncatus
ENSELUG00000017029	riok1	94	66.041	ENSUAMG00000003721	RIOK1	86	70.124	Ursus_americanus
ENSELUG00000017029	riok1	99	67.851	ENSUMAG00000018461	RIOK1	99	66.963	Ursus_maritimus
ENSELUG00000017029	riok1	87	73.022	ENSVVUG00000005018	RIOK1	99	66.252	Vulpes_vulpes
ENSELUG00000017029	riok1	88	67.617	ENSXETG00000020436	riok1	86	67.917	Xenopus_tropicalis
ENSELUG00000017029	riok1	84	68.467	ENSXCOG00000000245	riok1	100	67.819	Xiphophorus_couchianus
ENSELUG00000017029	riok1	75	74.029	ENSXMAG00000014572	riok1	97	65.294	Xiphophorus_maculatus