EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017278 (Gene tree)
Gene ID: 105012355
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 41886 bases
Position: chrLG10:24030738-24072623
Accession: 105012355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017564	zf-met	PF12874.7	0.00015	1	1
ENSELUP00000017564	IPPT	PF01715.17	1.9e-53	1	1
ENSELUP00000017564	zf-C2H2_jaz	PF12171.8	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000040236	-	1353	XM_013135455	ENSELUP00000017564	450 (aa)	XP_012990909	-

Gene Model

Click here to download ENSELUG00000017278's gene model file

Pathways

Pathway ID	Pathway Name	Source
els01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017278	trit1	90	54.817	ENSG00000043514	TRIT1	99	62.573	Homo_sapiens
ENSELUG00000017278	trit1	90	68.349	ENSAPOG00000020918	trit1	100	65.161	Acanthochromis_polyacanthus
ENSELUG00000017278	trit1	84	56.020	ENSAMEG00000004342	TRIT1	91	54.567	Ailuropoda_melanoleuca
ENSELUG00000017278	trit1	83	66.915	ENSACIG00000017409	trit1	98	62.741	Amphilophus_citrinellus
ENSELUG00000017278	trit1	90	68.578	ENSAOCG00000009850	trit1	90	68.578	Amphiprion_ocellaris
ENSELUG00000017278	trit1	90	68.349	ENSAPEG00000001481	trit1	90	68.349	Amphiprion_percula
ENSELUG00000017278	trit1	100	61.458	ENSATEG00000005426	trit1	99	61.458	Anabas_testudineus
ENSELUG00000017278	trit1	67	48.193	ENSAPLG00000011421	TRIT1	94	48.193	Anas_platyrhynchos
ENSELUG00000017278	trit1	84	56.511	ENSACAG00000002280	TRIT1	82	56.511	Anolis_carolinensis
ENSELUG00000017278	trit1	90	54.128	ENSANAG00000030732	TRIT1	97	50.529	Aotus_nancymaae
ENSELUG00000017278	trit1	100	63.636	ENSACLG00000004920	trit1	99	64.033	Astatotilapia_calliptera
ENSELUG00000017278	trit1	91	64.989	ENSAMXG00000010959	trit1	95	64.989	Astyanax_mexicanus
ENSELUG00000017278	trit1	84	56.757	ENSBTAG00000013832	TRIT1	87	56.757	Bos_taurus
ENSELUG00000017278	trit1	83	32.609	WBGene00001740	gro-1	96	33.333	Caenorhabditis_elegans
ENSELUG00000017278	trit1	84	56.265	ENSCJAG00000002620	TRIT1	90	55.692	Callithrix_jacchus
ENSELUG00000017278	trit1	84	56.863	ENSCAFG00000003048	TRIT1	91	55.374	Canis_familiaris
ENSELUG00000017278	trit1	84	54.632	ENSCAFG00020003875	TRIT1	96	52.707	Canis_lupus_dingo
ENSELUG00000017278	trit1	84	55.610	ENSCHIG00000013259	TRIT1	86	55.610	Capra_hircus
ENSELUG00000017278	trit1	85	56.479	ENSTSYG00000004363	TRIT1	87	56.479	Carlito_syrichta
ENSELUG00000017278	trit1	74	47.383	ENSCAPG00000017001	TRIT1	93	47.383	Cavia_aperea
ENSELUG00000017278	trit1	96	52.183	ENSCPOG00000012820	TRIT1	97	52.288	Cavia_porcellus
ENSELUG00000017278	trit1	86	55.422	ENSCCAG00000031271	TRIT1	94	60.674	Cebus_capucinus
ENSELUG00000017278	trit1	75	76.667	ENSCATG00000034344	TRIT1	90	56.250	Cercocebus_atys
ENSELUG00000017278	trit1	86	55.314	ENSCLAG00000009828	TRIT1	97	52.288	Chinchilla_lanigera
ENSELUG00000017278	trit1	81	52.941	ENSCSAG00000001137	TRIT1	94	52.941	Chlorocebus_sabaeus
ENSELUG00000017278	trit1	84	56.341	ENSCHOG00000000435	TRIT1	86	56.341	Choloepus_hoffmanni
ENSELUG00000017278	trit1	84	40.143	ENSCSAVG00000002050	-	90	40.143	Ciona_savignyi
ENSELUG00000017278	trit1	90	54.587	ENSCANG00000043008	TRIT1	93	54.587	Colobus_angolensis_palliatus
ENSELUG00000017278	trit1	84	57.248	ENSCGRG00001001894	Trit1	90	55.896	Cricetulus_griseus_chok1gshd
ENSELUG00000017278	trit1	81	53.197	ENSCGRG00000007059	Trit1	87	53.197	Cricetulus_griseus_crigri
ENSELUG00000017278	trit1	86	65.144	ENSCSEG00000009574	trit1	91	65.814	Cynoglossus_semilaevis
ENSELUG00000017278	trit1	88	63.934	ENSDARG00000032876	trit1	99	63.473	Danio_rerio
ENSELUG00000017278	trit1	84	49.359	ENSDNOG00000001994	TRIT1	88	49.359	Dasypus_novemcinctus
ENSELUG00000017278	trit1	86	47.962	ENSDORG00000012449	Trit1	89	48.411	Dipodomys_ordii
ENSELUG00000017278	trit1	83	38.679	FBgn0043799	CG31381	88	38.679	Drosophila_melanogaster
ENSELUG00000017278	trit1	82	55.693	ENSETEG00000008733	TRIT1	98	54.394	Echinops_telfairi
ENSELUG00000017278	trit1	91	50.461	ENSEBUG00000012845	trit1	91	52.228	Eptatretus_burgeri
ENSELUG00000017278	trit1	84	55.663	ENSECAG00000010597	TRIT1	80	55.663	Equus_caballus
ENSELUG00000017278	trit1	72	50.000	ENSEEUG00000009269	TRIT1	74	50.000	Erinaceus_europaeus
ENSELUG00000017278	trit1	84	56.511	ENSFCAG00000006029	TRIT1	87	56.511	Felis_catus
ENSELUG00000017278	trit1	77	54.692	ENSFALG00000000532	TRIT1	93	54.692	Ficedula_albicollis
ENSELUG00000017278	trit1	85	54.632	ENSFDAG00000003098	TRIT1	92	54.394	Fukomys_damarensis
ENSELUG00000017278	trit1	68	55.522	ENSFHEG00000022274	trit1	99	55.522	Fundulus_heteroclitus
ENSELUG00000017278	trit1	88	66.900	ENSGMOG00000006522	trit1	99	66.900	Gadus_morhua
ENSELUG00000017278	trit1	84	56.373	ENSGALG00000003851	TRIT1	88	56.373	Gallus_gallus
ENSELUG00000017278	trit1	74	59.229	ENSGAFG00000018636	trit1	96	69.663	Gambusia_affinis
ENSELUG00000017278	trit1	90	65.831	ENSGACG00000008493	trit1	100	65.831	Gasterosteus_aculeatus
ENSELUG00000017278	trit1	77	55.764	ENSGAGG00000000522	TRIT1	92	55.764	Gopherus_agassizii
ENSELUG00000017278	trit1	90	54.817	ENSGGOG00000010070	TRIT1	94	54.762	Gorilla_gorilla
ENSELUG00000017278	trit1	96	65.161	ENSHBUG00000018999	trit1	96	65.584	Haplochromis_burtoni
ENSELUG00000017278	trit1	86	50.495	ENSHGLG00000009564	-	89	50.495	Heterocephalus_glaber_female
ENSELUG00000017278	trit1	90	53.456	ENSHGLG00000010308	-	91	54.930	Heterocephalus_glaber_female
ENSELUG00000017278	trit1	90	53.456	ENSHGLG00100015382	-	92	54.930	Heterocephalus_glaber_male
ENSELUG00000017278	trit1	59	74.419	ENSHGLG00100018159	-	88	74.419	Heterocephalus_glaber_male
ENSELUG00000017278	trit1	84	67.561	ENSHCOG00000006755	trit1	81	67.561	Hippocampus_comes
ENSELUG00000017278	trit1	91	63.387	ENSIPUG00000021822	trit1	90	63.387	Ictalurus_punctatus
ENSELUG00000017278	trit1	84	56.020	ENSSTOG00000006446	TRIT1	84	56.020	Ictidomys_tridecemlineatus
ENSELUG00000017278	trit1	88	50.235	ENSJJAG00000000300	-	90	50.235	Jaculus_jaculus
ENSELUG00000017278	trit1	88	55.663	ENSJJAG00000000316	-	93	55.663	Jaculus_jaculus
ENSELUG00000017278	trit1	89	66.279	ENSKMAG00000021788	trit1	90	66.357	Kryptolebias_marmoratus
ENSELUG00000017278	trit1	90	68.864	ENSLBEG00000024262	trit1	89	69.585	Labrus_bergylta
ENSELUG00000017278	trit1	88	56.351	ENSLACG00000013861	TRIT1	87	56.351	Latimeria_chalumnae
ENSELUG00000017278	trit1	88	63.657	ENSLOCG00000002057	trit1	90	63.657	Lepisosteus_oculatus
ENSELUG00000017278	trit1	84	55.911	ENSLAFG00000016876	TRIT1	86	55.911	Loxodonta_africana
ENSELUG00000017278	trit1	88	54.953	ENSMFAG00000001316	TRIT1	90	56.250	Macaca_fascicularis
ENSELUG00000017278	trit1	88	54.953	ENSMMUG00000016220	TRIT1	90	56.250	Macaca_mulatta
ENSELUG00000017278	trit1	88	54.953	ENSMNEG00000023137	TRIT1	90	56.250	Macaca_nemestrina
ENSELUG00000017278	trit1	88	54.717	ENSMLEG00000035296	TRIT1	90	56.250	Mandrillus_leucophaeus
ENSELUG00000017278	trit1	85	66.910	ENSMAMG00000005868	trit1	98	62.474	Mastacembelus_armatus
ENSELUG00000017278	trit1	100	63.430	ENSMZEG00005011506	trit1	99	63.825	Maylandia_zebra
ENSELUG00000017278	trit1	77	53.209	ENSMGAG00000005516	TRIT1	99	53.209	Meleagris_gallopavo
ENSELUG00000017278	trit1	84	57.002	ENSMAUG00000000399	Trit1	90	55.660	Mesocricetus_auratus
ENSELUG00000017278	trit1	90	54.587	ENSMICG00000016294	TRIT1	87	56.757	Microcebus_murinus
ENSELUG00000017278	trit1	84	56.757	ENSMOCG00000008173	Trit1	90	55.425	Microtus_ochrogaster
ENSELUG00000017278	trit1	84	62.162	ENSMMOG00000021140	trit1	95	62.162	Mola_mola
ENSELUG00000017278	trit1	88	55.427	ENSMODG00000017650	TRIT1	94	55.427	Monodelphis_domestica
ENSELUG00000017278	trit1	96	63.305	ENSMALG00000017843	trit1	97	63.715	Monopterus_albus
ENSELUG00000017278	trit1	84	57.740	MGP_CAROLIEiJ_G0026428	Trit1	90	56.368	Mus_caroli
ENSELUG00000017278	trit1	84	57.985	ENSMUSG00000028653	Trit1	90	56.604	Mus_musculus
ENSELUG00000017278	trit1	84	57.985	MGP_PahariEiJ_G0028758	Trit1	90	56.604	Mus_pahari
ENSELUG00000017278	trit1	84	57.740	MGP_SPRETEiJ_G0027408	Trit1	90	56.368	Mus_spretus
ENSELUG00000017278	trit1	84	56.373	ENSMPUG00000014291	TRIT1	91	54.907	Mustela_putorius_furo
ENSELUG00000017278	trit1	84	54.791	ENSMLUG00000000334	TRIT1	86	54.545	Myotis_lucifugus
ENSELUG00000017278	trit1	90	54.817	ENSNLEG00000012038	TRIT1	94	54.896	Nomascus_leucogenys
ENSELUG00000017278	trit1	84	49.877	ENSMEUG00000005217	TRIT1	76	76.106	Notamacropus_eugenii
ENSELUG00000017278	trit1	65	53.614	ENSOPRG00000003205	-	62	53.614	Ochotona_princeps
ENSELUG00000017278	trit1	92	52.784	ENSODEG00000006117	TRIT1	97	51.717	Octodon_degus
ENSELUG00000017278	trit1	96	64.894	ENSONIG00000015407	trit1	97	65.310	Oreochromis_niloticus
ENSELUG00000017278	trit1	77	53.887	ENSOANG00000002779	TRIT1	94	53.887	Ornithorhynchus_anatinus
ENSELUG00000017278	trit1	88	54.717	ENSOCUG00000002054	TRIT1	90	54.717	Oryctolagus_cuniculus
ENSELUG00000017278	trit1	90	64.977	ENSORLG00000005802	trit1	93	64.977	Oryzias_latipes
ENSELUG00000017278	trit1	95	63.239	ENSORLG00020005519	trit1	98	63.239	Oryzias_latipes_hni
ENSELUG00000017278	trit1	95	63.239	ENSORLG00015018715	trit1	98	63.239	Oryzias_latipes_hsok
ENSELUG00000017278	trit1	89	64.733	ENSOMEG00000006569	trit1	91	64.733	Oryzias_melastigma
ENSELUG00000017278	trit1	84	56.265	ENSOGAG00000009571	TRIT1	87	56.265	Otolemur_garnettii
ENSELUG00000017278	trit1	84	56.863	ENSOARG00000020140	TRIT1	86	56.863	Ovis_aries
ENSELUG00000017278	trit1	90	54.817	ENSPPAG00000023930	TRIT1	94	54.896	Pan_paniscus
ENSELUG00000017278	trit1	84	56.265	ENSPPRG00000009680	TRIT1	87	56.265	Panthera_pardus
ENSELUG00000017278	trit1	84	56.265	ENSPTIG00000021134	TRIT1	87	56.265	Panthera_tigris_altaica
ENSELUG00000017278	trit1	90	54.817	ENSPTRG00000000579	TRIT1	94	54.896	Pan_troglodytes
ENSELUG00000017278	trit1	88	54.953	ENSPANG00000018125	TRIT1	90	56.250	Papio_anubis
ENSELUG00000017278	trit1	80	57.922	ENSPKIG00000024527	trit1	98	57.922	Paramormyrops_kingsleyae
ENSELUG00000017278	trit1	74	40.608	ENSPSIG00000017073	TRIT1	99	39.420	Pelodiscus_sinensis
ENSELUG00000017278	trit1	80	63.918	ENSPMGG00000018445	trit1	94	63.918	Periophthalmus_magnuspinnatus
ENSELUG00000017278	trit1	84	56.757	ENSPEMG00000022418	Trit1	87	56.757	Peromyscus_maniculatus_bairdii
ENSELUG00000017278	trit1	81	50.250	ENSPMAG00000008892	trit1	100	50.250	Petromyzon_marinus
ENSELUG00000017278	trit1	88	56.047	ENSPCIG00000020666	TRIT1	93	56.047	Phascolarctos_cinereus
ENSELUG00000017278	trit1	89	65.207	ENSPFOG00000014626	trit1	91	64.286	Poecilia_formosa
ENSELUG00000017278	trit1	68	63.881	ENSPLAG00000011669	trit1	97	62.687	Poecilia_latipinna
ENSELUG00000017278	trit1	60	67.286	ENSPMEG00000023788	trit1	96	67.286	Poecilia_mexicana
ENSELUG00000017278	trit1	68	62.687	ENSPREG00000018182	trit1	93	61.493	Poecilia_reticulata
ENSELUG00000017278	trit1	90	54.358	ENSPPYG00000001499	TRIT1	93	54.358	Pongo_abelii
ENSELUG00000017278	trit1	66	43.519	ENSPCAG00000014680	TRIT1	89	43.519	Procavia_capensis
ENSELUG00000017278	trit1	86	55.663	ENSPCOG00000014150	TRIT1	86	56.265	Propithecus_coquereli
ENSELUG00000017278	trit1	72	74.107	ENSPVAG00000003344	TRIT1	75	74.107	Pteropus_vampyrus
ENSELUG00000017278	trit1	60	72.202	ENSPNYG00000001003	trit1	88	72.993	Pundamilia_nyererei
ENSELUG00000017278	trit1	92	63.409	ENSPNAG00000009466	trit1	94	61.600	Pygocentrus_nattereri
ENSELUG00000017278	trit1	84	55.582	ENSRNOG00000014274	Trit1	91	54.195	Rattus_norvegicus
ENSELUG00000017278	trit1	88	54.717	ENSRBIG00000043179	TRIT1	90	55.937	Rhinopithecus_bieti
ENSELUG00000017278	trit1	88	54.717	ENSRROG00000042670	TRIT1	90	55.937	Rhinopithecus_roxellana
ENSELUG00000017278	trit1	90	54.128	ENSSBOG00000024417	TRIT1	93	54.128	Saimiri_boliviensis_boliviensis
ENSELUG00000017278	trit1	87	49.763	ENSSHAG00000018363	TRIT1	99	49.763	Sarcophilus_harrisii
ENSELUG00000017278	trit1	88	62.353	ENSSFOG00015007284	trit1	83	62.353	Scleropages_formosus
ENSELUG00000017278	trit1	99	63.789	ENSSMAG00000020730	trit1	98	63.789	Scophthalmus_maximus
ENSELUG00000017278	trit1	99	64.990	ENSSDUG00000001683	trit1	98	64.990	Seriola_dumerili
ENSELUG00000017278	trit1	86	68.357	ENSSLDG00000008379	trit1	98	64.361	Seriola_lalandi_dorsalis
ENSELUG00000017278	trit1	89	53.587	ENSSARG00000004540	TRIT1	94	53.587	Sorex_araneus
ENSELUG00000017278	trit1	77	54.692	ENSSPUG00000003472	TRIT1	76	54.692	Sphenodon_punctatus
ENSELUG00000017278	trit1	85	69.586	ENSSPAG00000020745	trit1	91	69.417	Stegastes_partitus
ENSELUG00000017278	trit1	77	51.715	ENSTGUG00000001242	TRIT1	99	51.715	Taeniopygia_guttata
ENSELUG00000017278	trit1	95	64.192	ENSTRUG00000013936	trit1	98	64.944	Takifugu_rubripes
ENSELUG00000017278	trit1	94	62.806	ENSTNIG00000009240	trit1	94	65.258	Tetraodon_nigroviridis
ENSELUG00000017278	trit1	71	78.571	ENSTBEG00000001317	TRIT1	71	78.571	Tupaia_belangeri
ENSELUG00000017278	trit1	84	56.020	ENSTTRG00000005064	TRIT1	87	56.020	Tursiops_truncatus
ENSELUG00000017278	trit1	53	61.345	ENSUAMG00000000522	-	88	66.667	Ursus_americanus
ENSELUG00000017278	trit1	84	56.511	ENSUMAG00000017299	TRIT1	82	55.035	Ursus_maritimus
ENSELUG00000017278	trit1	84	51.843	ENSVPAG00000003008	TRIT1	86	51.843	Vicugna_pacos
ENSELUG00000017278	trit1	85	54.676	ENSXETG00000010952	trit1	90	54.348	Xenopus_tropicalis
ENSELUG00000017278	trit1	68	63.582	ENSXMAG00000016302	trit1	91	62.388	Xiphophorus_maculatus