EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017306 (Gene tree)
Gene ID: 105012903
Gene Symbol: -
Alias: -
Full Name: nucleoplasmin ATPase-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10296 bases
Position: chrLG11:29144997-29155292
Accession: 105012903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017626	Nucleoplasmin	PF03066.15	2e-28	1	1
ENSELUP00000037590	Nucleoplasmin	PF03066.15	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027261	-	420	-	ENSELUP00000037590	139 (aa)	-	-
ENSELUT00000027272	-	5851	XM_010874048	ENSELUP00000017626	130 (aa)	XP_010872350	UPI000577EAF3

Gene Model

Click here to download ENSELUG00000017306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017306	-	84	41.228	ENSELUG00000022123	npm1b	60	41.748
ENSELUG00000017306	-	77	43.137	ENSELUG00000021730	npm3	64	42.857
ENSELUG00000017306	-	86	42.857	ENSELUG00000004822	npm2b	65	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017306	-	88	42.017	ENSG00000158806	NPM2	99	37.755	Homo_sapiens
ENSELUG00000017306	-	93	39.516	ENSACAG00000000163	-	57	38.938	Anolis_carolinensis
ENSELUG00000017306	-	88	41.176	ENSANAG00000038138	-	88	41.176	Aotus_nancymaae
ENSELUG00000017306	-	86	40.179	ENSAMXG00000038475	npm2b	59	40.179	Astyanax_mexicanus
ENSELUG00000017306	-	87	66.372	ENSAMXG00000001084	npm2a	78	68.966	Astyanax_mexicanus
ENSELUG00000017306	-	88	37.815	ENSBTAG00000046918	NPM2	62	38.655	Bos_taurus
ENSELUG00000017306	-	86	40.171	ENSCJAG00000020389	NPM2	86	40.171	Callithrix_jacchus
ENSELUG00000017306	-	78	38.095	ENSCAFG00020015194	-	51	38.095	Canis_lupus_dingo
ENSELUG00000017306	-	80	38.318	ENSCAFG00020015227	-	51	37.963	Canis_lupus_dingo
ENSELUG00000017306	-	87	38.136	ENSCHIG00000026056	NPM2	60	37.815	Capra_hircus
ENSELUG00000017306	-	88	42.735	ENSTSYG00000026275	NPM2	93	37.594	Carlito_syrichta
ENSELUG00000017306	-	88	40.336	ENSCCAG00000035076	NPM2	88	40.336	Cebus_capucinus
ENSELUG00000017306	-	88	42.017	ENSCATG00000031833	NPM2	88	42.017	Cercocebus_atys
ENSELUG00000017306	-	88	35.537	ENSCLAG00000013600	NPM2	62	35.537	Chinchilla_lanigera
ENSELUG00000017306	-	88	42.017	ENSCSAG00000016588	NPM2	63	42.017	Chlorocebus_sabaeus
ENSELUG00000017306	-	88	42.017	ENSCANG00000040109	NPM2	88	42.017	Colobus_angolensis_palliatus
ENSELUG00000017306	-	83	61.111	ENSDARG00000076391	npm2a	73	62.393	Danio_rerio
ENSELUG00000017306	-	86	42.478	ENSDARG00000053963	npm2b	62	42.478	Danio_rerio
ENSELUG00000017306	-	84	41.026	ENSDORG00000012371	Npm2	54	40.678	Dipodomys_ordii
ENSELUG00000017306	-	88	39.496	ENSEASG00005018856	NPM2	62	39.496	Equus_asinus_asinus
ENSELUG00000017306	-	88	39.496	ENSECAG00000024685	NPM2	55	39.496	Equus_caballus
ENSELUG00000017306	-	77	36.893	ENSFDAG00000007971	NPM2	54	36.893	Fukomys_damarensis
ENSELUG00000017306	-	78	49.020	ENSGALG00000050870	NPM2	51	49.020	Gallus_gallus
ENSELUG00000017306	-	82	50.000	ENSGALG00000054664	-	70	50.000	Gallus_gallus
ENSELUG00000017306	-	88	42.017	ENSGGOG00000007071	NPM2	88	42.017	Gorilla_gorilla
ENSELUG00000017306	-	88	40.351	ENSIPUG00000013175	npm2b	66	40.351	Ictalurus_punctatus
ENSELUG00000017306	-	85	66.364	ENSIPUG00000010101	npm2a	75	65.812	Ictalurus_punctatus
ENSELUG00000017306	-	88	32.203	ENSSTOG00000013623	NPM2	55	32.203	Ictidomys_tridecemlineatus
ENSELUG00000017306	-	85	39.655	ENSJJAG00000018214	Npm2	54	38.596	Jaculus_jaculus
ENSELUG00000017306	-	88	41.176	ENSLACG00000016196	NPM2	74	38.760	Latimeria_chalumnae
ENSELUG00000017306	-	90	40.336	ENSLOCG00000014878	npm2b	60	40.336	Lepisosteus_oculatus
ENSELUG00000017306	-	77	39.806	ENSLAFG00000015584	NPM2	55	37.815	Loxodonta_africana
ENSELUG00000017306	-	88	42.017	ENSMFAG00000032098	NPM2	88	42.017	Macaca_fascicularis
ENSELUG00000017306	-	87	42.373	ENSMMUG00000002034	NPM2	88	42.017	Macaca_mulatta
ENSELUG00000017306	-	88	42.017	ENSMNEG00000010994	NPM2	88	42.017	Macaca_nemestrina
ENSELUG00000017306	-	88	42.017	ENSMLEG00000030071	NPM2	88	42.017	Mandrillus_leucophaeus
ENSELUG00000017306	-	81	38.318	ENSMAUG00000004228	Npm2	50	38.318	Mesocricetus_auratus
ENSELUG00000017306	-	88	39.496	ENSMICG00000030722	-	87	39.496	Microcebus_murinus
ENSELUG00000017306	-	85	38.596	ENSMOCG00000017251	Npm2	61	38.596	Microtus_ochrogaster
ENSELUG00000017306	-	79	40.566	ENSMODG00000009677	-	54	40.566	Monodelphis_domestica
ENSELUG00000017306	-	86	37.719	MGP_CAROLIEiJ_G0019492	Npm2	55	37.719	Mus_caroli
ENSELUG00000017306	-	86	39.474	ENSMUSG00000047911	Npm2	71	36.667	Mus_musculus
ENSELUG00000017306	-	86	37.719	MGP_PahariEiJ_G0030509	Npm2	54	37.719	Mus_pahari
ENSELUG00000017306	-	86	39.474	MGP_SPRETEiJ_G0020384	Npm2	55	39.474	Mus_spretus
ENSELUG00000017306	-	88	37.815	ENSMPUG00000004012	NPM2	54	37.815	Mustela_putorius_furo
ENSELUG00000017306	-	83	37.168	ENSMLUG00000016075	NPM2	55	36.522	Myotis_lucifugus
ENSELUG00000017306	-	85	38.596	ENSNGAG00000022056	Npm2	54	38.596	Nannospalax_galili
ENSELUG00000017306	-	88	39.496	ENSNLEG00000035765	NPM2	88	39.496	Nomascus_leucogenys
ENSELUG00000017306	-	84	36.842	ENSOPRG00000012940	NPM2	54	36.842	Ochotona_princeps
ENSELUG00000017306	-	81	40.741	ENSOANG00000020262	-	53	39.316	Ornithorhynchus_anatinus
ENSELUG00000017306	-	88	34.454	ENSOCUG00000021756	NPM2	57	34.454	Oryctolagus_cuniculus
ENSELUG00000017306	-	88	39.496	ENSOGAG00000011562	NPM2	55	39.496	Otolemur_garnettii
ENSELUG00000017306	-	88	41.176	ENSPPAG00000040749	NPM2	88	41.176	Pan_paniscus
ENSELUG00000017306	-	88	36.975	ENSPPRG00000022157	NPM2	87	36.975	Panthera_pardus
ENSELUG00000017306	-	81	36.522	ENSPTIG00000011553	NPM2	90	36.522	Panthera_tigris_altaica
ENSELUG00000017306	-	88	42.017	ENSPTRG00000020045	NPM2	88	42.017	Pan_troglodytes
ENSELUG00000017306	-	88	42.017	ENSPANG00000031080	NPM2	88	42.017	Papio_anubis
ENSELUG00000017306	-	90	41.176	ENSPKIG00000009700	npm2b	60	41.176	Paramormyrops_kingsleyae
ENSELUG00000017306	-	87	65.487	ENSPKIG00000007241	npm2a	76	65.487	Paramormyrops_kingsleyae
ENSELUG00000017306	-	81	47.170	ENSPSIG00000007722	NPM2	52	47.170	Pelodiscus_sinensis
ENSELUG00000017306	-	84	38.393	ENSPEMG00000013368	Npm2	54	38.393	Peromyscus_maniculatus_bairdii
ENSELUG00000017306	-	94	33.846	ENSPCIG00000012716	-	51	34.862	Phascolarctos_cinereus
ENSELUG00000017306	-	88	40.336	ENSPCOG00000018483	-	87	40.336	Propithecus_coquereli
ENSELUG00000017306	-	86	43.363	ENSPNAG00000001303	npm2b	60	43.363	Pygocentrus_nattereri
ENSELUG00000017306	-	82	71.963	ENSPNAG00000018186	npm2a	78	69.231	Pygocentrus_nattereri
ENSELUG00000017306	-	88	37.931	ENSRNOG00000025638	Npm2	56	37.931	Rattus_norvegicus
ENSELUG00000017306	-	88	42.017	ENSRBIG00000029235	NPM2	88	42.017	Rhinopithecus_bieti
ENSELUG00000017306	-	88	42.017	ENSRROG00000044119	NPM2	88	42.017	Rhinopithecus_roxellana
ENSELUG00000017306	-	88	41.176	ENSSBOG00000025301	NPM2	87	41.525	Saimiri_boliviensis_boliviensis
ENSELUG00000017306	-	62	32.143	ENSSHAG00000017903	-	92	32.143	Sarcophilus_harrisii
ENSELUG00000017306	-	85	46.903	ENSSFOG00015010466	npm2b	64	46.903	Scleropages_formosus
ENSELUG00000017306	-	74	46.392	ENSSPUG00000011509	NPM2	68	46.392	Sphenodon_punctatus
ENSELUG00000017306	-	88	40.336	ENSSSCG00000009610	NPM2	64	40.336	Sus_scrofa
ENSELUG00000017306	-	78	39.048	ENSVVUG00000021949	-	53	38.655	Vulpes_vulpes
ENSELUG00000017306	-	82	35.780	ENSVVUG00000007256	-	53	36.134	Vulpes_vulpes
ENSELUG00000017306	-	88	47.826	ENSXETG00000010542	npm2	64	47.826	Xenopus_tropicalis
ENSELUG00000017306	-	89	43.220	ENSXETG00000016499	-	82	44.340	Xenopus_tropicalis