EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017336 (Gene tree)
Gene ID: 105006604
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 15486 bases
Position: chrAZJR03000445.1:299751-315236
Accession: 105006604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017597	PARP	PF00644.20	1.3e-72	1	1
ENSELUP00000017644	PARP	PF00644.20	2.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000040267	-	5085	XM_010865231	ENSELUP00000017644	966 (aa)	XP_010863533	-
ENSELUT00000027256	-	2919	-	ENSELUP00000017597	972 (aa)	-	-

Gene Model

Click here to download ENSELUG00000017336's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03410	Base excision repair	KEGG
els04210	Apoptosis	KEGG
els04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017336	parp1	55	41.636	ENSELUG00000004067	parp2	93	41.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017336	parp1	100	71.034	ENSG00000143799	PARP1	99	71.654	Homo_sapiens
ENSELUG00000017336	parp1	99	84.117	ENSAPOG00000006414	parp1	99	84.117	Acanthochromis_polyacanthus
ENSELUG00000017336	parp1	98	70.324	ENSAMEG00000014451	PARP1	100	68.807	Ailuropoda_melanoleuca
ENSELUG00000017336	parp1	100	84.325	ENSACIG00000005651	parp1	100	83.714	Amphilophus_citrinellus
ENSELUG00000017336	parp1	99	85.057	ENSAOCG00000021005	parp1	99	85.057	Amphiprion_ocellaris
ENSELUG00000017336	parp1	99	85.057	ENSAPEG00000004784	parp1	99	85.057	Amphiprion_percula
ENSELUG00000017336	parp1	99	84.216	ENSATEG00000010457	parp1	99	84.535	Anabas_testudineus
ENSELUG00000017336	parp1	91	72.964	ENSAPLG00000014039	PARP1	99	72.985	Anas_platyrhynchos
ENSELUG00000017336	parp1	100	71.528	ENSACAG00000006189	PARP1	100	70.833	Anolis_carolinensis
ENSELUG00000017336	parp1	100	71.203	ENSANAG00000032699	PARP1	99	71.970	Aotus_nancymaae
ENSELUG00000017336	parp1	100	85.085	ENSACLG00000015489	parp1	100	84.885	Astatotilapia_calliptera
ENSELUG00000017336	parp1	99	82.469	ENSAMXG00000006465	parp1	99	83.299	Astyanax_mexicanus
ENSELUG00000017336	parp1	100	68.633	ENSBTAG00000000837	PARP1	99	69.579	Bos_taurus
ENSELUG00000017336	parp1	87	42.301	WBGene00004049	parp-1	100	46.360	Caenorhabditis_elegans
ENSELUG00000017336	parp1	100	70.809	ENSCJAG00000012831	PARP1	99	71.444	Callithrix_jacchus
ENSELUG00000017336	parp1	98	69.538	ENSCAFG00000016089	PARP1	100	68.621	Canis_familiaris
ENSELUG00000017336	parp1	100	70.160	ENSCAFG00020001660	PARP1	100	70.040	Canis_lupus_dingo
ENSELUG00000017336	parp1	100	69.513	ENSCHIG00000018072	PARP1	100	69.017	Capra_hircus
ENSELUG00000017336	parp1	95	72.432	ENSTSYG00000003699	PARP1	99	72.887	Carlito_syrichta
ENSELUG00000017336	parp1	99	58.856	ENSCAPG00000011113	-	99	59.231	Cavia_aperea
ENSELUG00000017336	parp1	100	70.850	ENSCPOG00000015643	-	100	69.862	Cavia_porcellus
ENSELUG00000017336	parp1	100	71.105	ENSCCAG00000033484	PARP1	99	71.444	Cebus_capucinus
ENSELUG00000017336	parp1	100	70.345	ENSCATG00000038981	PARP1	99	71.128	Cercocebus_atys
ENSELUG00000017336	parp1	99	70.833	ENSCLAG00000006637	PARP1	99	70.992	Chinchilla_lanigera
ENSELUG00000017336	parp1	61	81.250	ENSCHOG00000003539	PARP1	66	81.250	Choloepus_hoffmanni
ENSELUG00000017336	parp1	99	72.664	ENSCPBG00000011958	PARP1	99	73.291	Chrysemys_picta_bellii
ENSELUG00000017336	parp1	98	70.829	ENSCANG00000041340	PARP1	100	69.405	Colobus_angolensis_palliatus
ENSELUG00000017336	parp1	100	69.428	ENSCGRG00001020559	Parp1	99	70.855	Cricetulus_griseus_chok1gshd
ENSELUG00000017336	parp1	98	70.750	ENSCGRG00000004864	Parp1	100	68.448	Cricetulus_griseus_crigri
ENSELUG00000017336	parp1	98	84.704	ENSCSEG00000020665	parp1	100	84.571	Cynoglossus_semilaevis
ENSELUG00000017336	parp1	98	83.141	ENSCVAG00000021372	parp1	97	83.054	Cyprinodon_variegatus
ENSELUG00000017336	parp1	100	82.428	ENSDARG00000019529	parp1	99	83.996	Danio_rerio
ENSELUG00000017336	parp1	98	69.694	ENSDNOG00000012059	PARP1	100	67.526	Dasypus_novemcinctus
ENSELUG00000017336	parp1	98	69.588	ENSDORG00000005234	Parp1	100	68.004	Dipodomys_ordii
ENSELUG00000017336	parp1	99	41.990	FBgn0010247	Parp	99	41.575	Drosophila_melanogaster
ENSELUG00000017336	parp1	87	81.250	ENSETEG00000013254	PARP1	88	81.250	Echinops_telfairi
ENSELUG00000017336	parp1	98	58.824	ENSEBUG00000005820	parp1	100	57.374	Eptatretus_burgeri
ENSELUG00000017336	parp1	98	69.709	ENSEASG00005013275	PARP1	98	70.588	Equus_asinus_asinus
ENSELUG00000017336	parp1	100	69.754	ENSECAG00000019207	PARP1	99	70.903	Equus_caballus
ENSELUG00000017336	parp1	99	67.656	ENSEEUG00000012253	PARP1	99	67.161	Erinaceus_europaeus
ENSELUG00000017336	parp1	98	70.042	ENSFCAG00000005777	PARP1	100	68.539	Felis_catus
ENSELUG00000017336	parp1	98	73.452	ENSFALG00000011578	PARP1	100	71.988	Ficedula_albicollis
ENSELUG00000017336	parp1	99	69.784	ENSFDAG00000017662	PARP1	100	69.065	Fukomys_damarensis
ENSELUG00000017336	parp1	100	81.872	ENSFHEG00000001117	parp1	99	83.490	Fundulus_heteroclitus
ENSELUG00000017336	parp1	99	83.194	ENSGMOG00000014929	parp1	99	83.090	Gadus_morhua
ENSELUG00000017336	parp1	99	73.062	ENSGALG00000009228	PARP1	99	73.973	Gallus_gallus
ENSELUG00000017336	parp1	100	81.970	ENSGAFG00000010450	parp1	99	83.351	Gambusia_affinis
ENSELUG00000017336	parp1	100	82.382	ENSGACG00000011280	parp1	99	84.760	Gasterosteus_aculeatus
ENSELUG00000017336	parp1	99	72.537	ENSGAGG00000010066	PARP1	99	73.368	Gopherus_agassizii
ENSELUG00000017336	parp1	100	70.739	ENSGGOG00000006308	PARP1	99	71.444	Gorilla_gorilla
ENSELUG00000017336	parp1	99	85.580	ENSHBUG00000010490	parp1	99	85.714	Haplochromis_burtoni
ENSELUG00000017336	parp1	98	70.464	ENSHGLG00000003992	PARP1	93	68.834	Heterocephalus_glaber_female
ENSELUG00000017336	parp1	98	70.464	ENSHGLG00100016965	PARP1	93	68.834	Heterocephalus_glaber_male
ENSELUG00000017336	parp1	99	82.347	ENSHCOG00000011619	parp1	99	82.658	Hippocampus_comes
ENSELUG00000017336	parp1	100	79.961	ENSIPUG00000020250	parp1	99	81.601	Ictalurus_punctatus
ENSELUG00000017336	parp1	100	71.330	ENSSTOG00000016000	PARP1	99	72.046	Ictidomys_tridecemlineatus
ENSELUG00000017336	parp1	100	69.557	ENSJJAG00000023497	Parp1	99	70.222	Jaculus_jaculus
ENSELUG00000017336	parp1	100	82.382	ENSKMAG00000011627	parp1	99	83.090	Kryptolebias_marmoratus
ENSELUG00000017336	parp1	99	85.162	ENSLBEG00000013376	parp1	99	84.937	Labrus_bergylta
ENSELUG00000017336	parp1	99	56.164	ENSLACG00000002735	PARP1	99	57.101	Latimeria_chalumnae
ENSELUG00000017336	parp1	100	80.990	ENSLOCG00000015798	parp1	100	80.990	Lepisosteus_oculatus
ENSELUG00000017336	parp1	98	70.570	ENSLAFG00000007830	PARP1	100	68.205	Loxodonta_africana
ENSELUG00000017336	parp1	100	70.345	ENSMFAG00000002526	PARP1	99	71.022	Macaca_fascicularis
ENSELUG00000017336	parp1	100	70.443	ENSMMUG00000021820	PARP1	99	71.128	Macaca_mulatta
ENSELUG00000017336	parp1	100	70.443	ENSMNEG00000034074	PARP1	99	71.414	Macaca_nemestrina
ENSELUG00000017336	parp1	100	68.566	ENSMLEG00000012344	PARP1	99	69.118	Mandrillus_leucophaeus
ENSELUG00000017336	parp1	99	85.954	ENSMAMG00000020652	parp1	99	85.849	Mastacembelus_armatus
ENSELUG00000017336	parp1	99	85.893	ENSMZEG00005016907	parp1	99	86.027	Maylandia_zebra
ENSELUG00000017336	parp1	99	73.093	ENSMGAG00000007760	PARP1	100	72.268	Meleagris_gallopavo
ENSELUG00000017336	parp1	100	69.329	ENSMAUG00000008306	Parp1	99	70.539	Mesocricetus_auratus
ENSELUG00000017336	parp1	100	66.995	ENSMICG00000017076	PARP1	99	67.511	Microcebus_murinus
ENSELUG00000017336	parp1	99	69.444	ENSMOCG00000014315	Parp1	99	70.433	Microtus_ochrogaster
ENSELUG00000017336	parp1	100	83.598	ENSMMOG00000015966	parp1	100	83.499	Mola_mola
ENSELUG00000017336	parp1	100	70.316	ENSMODG00000006076	PARP1	99	70.798	Monodelphis_domestica
ENSELUG00000017336	parp1	98	82.292	ENSMALG00000004057	parp1	100	79.586	Monopterus_albus
ENSELUG00000017336	parp1	100	69.655	MGP_CAROLIEiJ_G0014978	Parp1	100	79.592	Mus_caroli
ENSELUG00000017336	parp1	100	69.261	ENSMUSG00000026496	Parp1	99	79.592	Mus_musculus
ENSELUG00000017336	parp1	100	69.261	MGP_SPRETEiJ_G0015777	Parp1	100	79.592	Mus_spretus
ENSELUG00000017336	parp1	100	69.724	ENSMPUG00000004585	PARP1	100	69.231	Mustela_putorius_furo
ENSELUG00000017336	parp1	91	59.710	ENSMLUG00000012285	PARP1	100	59.141	Myotis_lucifugus
ENSELUG00000017336	parp1	100	69.724	ENSNGAG00000003885	Parp1	99	70.433	Nannospalax_galili
ENSELUG00000017336	parp1	100	84.685	ENSNBRG00000017434	parp1	100	84.484	Neolamprologus_brichardi
ENSELUG00000017336	parp1	97	74.038	ENSNLEG00000013905	PARP1	100	74.038	Nomascus_leucogenys
ENSELUG00000017336	parp1	70	80.896	ENSMEUG00000007720	PARP1	87	80.896	Notamacropus_eugenii
ENSELUG00000017336	parp1	100	71.626	ENSOPRG00000011722	PARP1	99	72.603	Ochotona_princeps
ENSELUG00000017336	parp1	100	69.694	ENSODEG00000007424	PARP1	100	69.406	Octodon_degus
ENSELUG00000017336	parp1	99	85.089	ENSONIG00000013486	parp1	99	85.610	Oreochromis_niloticus
ENSELUG00000017336	parp1	99	70.812	ENSOANG00000001488	PARP1	100	70.504	Ornithorhynchus_anatinus
ENSELUG00000017336	parp1	100	70.472	ENSOCUG00000017820	PARP1	99	71.354	Oryctolagus_cuniculus
ENSELUG00000017336	parp1	99	83.090	ENSORLG00000013691	parp1	99	82.881	Oryzias_latipes
ENSELUG00000017336	parp1	99	82.985	ENSORLG00020001074	parp1	97	82.777	Oryzias_latipes_hni
ENSELUG00000017336	parp1	99	82.985	ENSORLG00015007090	parp1	99	82.777	Oryzias_latipes_hsok
ENSELUG00000017336	parp1	100	71.034	ENSOGAG00000016206	PARP1	99	71.022	Otolemur_garnettii
ENSELUG00000017336	parp1	100	69.125	ENSOARG00000000811	PARP1	99	70.000	Ovis_aries
ENSELUG00000017336	parp1	100	70.640	ENSPPAG00000040862	PARP1	99	71.233	Pan_paniscus
ENSELUG00000017336	parp1	98	70.042	ENSPPRG00000003528	PARP1	100	68.448	Panthera_pardus
ENSELUG00000017336	parp1	95	59.869	ENSPTIG00000009102	PARP1	98	59.382	Panthera_tigris_altaica
ENSELUG00000017336	parp1	100	70.640	ENSPTRG00000002049	PARP1	99	71.233	Pan_troglodytes
ENSELUG00000017336	parp1	100	70.472	ENSPANG00000011198	PARP1	99	71.263	Papio_anubis
ENSELUG00000017336	parp1	100	81.306	ENSPKIG00000006039	parp1	99	83.193	Paramormyrops_kingsleyae
ENSELUG00000017336	parp1	99	71.692	ENSPSIG00000016374	PARP1	100	71.179	Pelodiscus_sinensis
ENSELUG00000017336	parp1	100	81.635	ENSPMGG00000008936	parp1	100	81.332	Periophthalmus_magnuspinnatus
ENSELUG00000017336	parp1	100	69.231	ENSPEMG00000020230	Parp1	99	70.961	Peromyscus_maniculatus_bairdii
ENSELUG00000017336	parp1	99	70.268	ENSPCIG00000006436	PARP1	99	70.860	Phascolarctos_cinereus
ENSELUG00000017336	parp1	100	82.167	ENSPFOG00000002342	parp1	99	82.618	Poecilia_formosa
ENSELUG00000017336	parp1	100	82.069	ENSPLAG00000000909	parp1	99	83.455	Poecilia_latipinna
ENSELUG00000017336	parp1	100	82.463	ENSPMEG00000013979	parp1	99	83.874	Poecilia_mexicana
ENSELUG00000017336	parp1	100	82.266	ENSPREG00000001114	parp1	99	83.665	Poecilia_reticulata
ENSELUG00000017336	parp1	98	71.593	ENSPPYG00000000164	PARP1	100	69.650	Pongo_abelii
ENSELUG00000017336	parp1	61	81.790	ENSPCAG00000005558	-	59	81.790	Procavia_capensis
ENSELUG00000017336	parp1	100	70.640	ENSPCOG00000016918	PARP1	99	71.519	Propithecus_coquereli
ENSELUG00000017336	parp1	91	80.488	ENSPVAG00000005543	PARP1	85	80.488	Pteropus_vampyrus
ENSELUG00000017336	parp1	100	85.085	ENSPNYG00000009702	parp1	100	84.885	Pundamilia_nyererei
ENSELUG00000017336	parp1	98	83.871	ENSPNAG00000002787	parp1	99	83.871	Pygocentrus_nattereri
ENSELUG00000017336	parp1	98	70.273	ENSRNOG00000003084	Parp1	99	70.378	Rattus_norvegicus
ENSELUG00000017336	parp1	100	70.542	ENSRBIG00000044893	PARP1	99	73.786	Rhinopithecus_bieti
ENSELUG00000017336	parp1	100	70.542	ENSRROG00000029280	PARP1	99	73.786	Rhinopithecus_roxellana
ENSELUG00000017336	parp1	99	54.095	ENSRROG00000040615	-	97	60.260	Rhinopithecus_roxellana
ENSELUG00000017336	parp1	100	71.105	ENSSBOG00000010144	PARP1	99	71.865	Saimiri_boliviensis_boliviensis
ENSELUG00000017336	parp1	99	70.267	ENSSHAG00000001991	PARP1	100	70.062	Sarcophilus_harrisii
ENSELUG00000017336	parp1	100	82.185	ENSSFOG00015020017	parp1	99	83.577	Scleropages_formosus
ENSELUG00000017336	parp1	99	85.475	ENSSMAG00000013799	parp1	99	85.475	Scophthalmus_maximus
ENSELUG00000017336	parp1	99	85.893	ENSSDUG00000016626	parp1	99	85.893	Seriola_dumerili
ENSELUG00000017336	parp1	99	85.684	ENSSLDG00000006384	parp1	99	85.684	Seriola_lalandi_dorsalis
ENSELUG00000017336	parp1	56	79.398	ENSSARG00000009436	-	58	82.143	Sorex_araneus
ENSELUG00000017336	parp1	100	68.688	ENSSPUG00000007790	PARP1	100	68.091	Sphenodon_punctatus
ENSELUG00000017336	parp1	99	83.141	ENSSPAG00000019074	parp1	99	84.748	Stegastes_partitus
ENSELUG00000017336	parp1	100	69.754	ENSSSCG00000023660	PARP1	100	69.557	Sus_scrofa
ENSELUG00000017336	parp1	98	71.540	ENSTGUG00000004260	-	99	72.667	Taeniopygia_guttata
ENSELUG00000017336	parp1	99	82.672	ENSTRUG00000014490	parp1	99	82.322	Takifugu_rubripes
ENSELUG00000017336	parp1	100	82.192	ENSTNIG00000016384	parp1	100	81.587	Tetraodon_nigroviridis
ENSELUG00000017336	parp1	87	76.136	ENSTBEG00000002364	PARP1	89	76.136	Tupaia_belangeri
ENSELUG00000017336	parp1	100	65.779	ENSTTRG00000000188	PARP1	100	65.286	Tursiops_truncatus
ENSELUG00000017336	parp1	98	70.637	ENSUAMG00000014388	PARP1	100	69.026	Ursus_americanus
ENSELUG00000017336	parp1	98	64.008	ENSUMAG00000014555	PARP1	99	64.256	Ursus_maritimus
ENSELUG00000017336	parp1	83	80.392	ENSVPAG00000011411	PARP1	83	80.392	Vicugna_pacos
ENSELUG00000017336	parp1	98	69.748	ENSVVUG00000001655	PARP1	100	68.621	Vulpes_vulpes
ENSELUG00000017336	parp1	98	71.503	ENSXETG00000022610	parp1	99	69.587	Xenopus_tropicalis
ENSELUG00000017336	parp1	100	81.675	ENSXMAG00000003632	parp1	99	82.932	Xiphophorus_maculatus