EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017369 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 3755 bases
Position: chrLG09:16745150-16748904
Accession: 105006847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037646	EXOSC1	PF10447.9	9.9e-16	1	1
ENSELUP00000037643	EXOSC1	PF10447.9	1.3e-15	1	1
ENSELUP00000037629	EXOSC1	PF10447.9	1.5e-15	1	1
ENSELUP00000037646	ECR1_N	PF14382.6	6.5e-12	1	1
ENSELUP00000037643	ECR1_N	PF14382.6	1.5e-10	1	1
ENSELUP00000037629	ECR1_N	PF14382.6	1.7e-10	1	1
ENSELUP00000037656	ECR1_N	PF14382.6	5.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027391	-	513	-	ENSELUP00000037656	170 (aa)	-	-
ENSELUT00000027376	-	654	-	ENSELUP00000037646	217 (aa)	-	-
ENSELUT00000027337	-	750	-	ENSELUP00000037629	249 (aa)	-	-
ENSELUT00000027353	-	681	XM_010865546	ENSELUP00000037643	226 (aa)	XP_010863848	-

Gene Model

Click here to download ENSELUG00000017369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017369	exosc1	97	71.856	ENSG00000171311	EXOSC1	94	80.978	Homo_sapiens
ENSELUG00000017369	exosc1	87	91.371	ENSAPOG00000007822	exosc1	99	91.371	Acanthochromis_polyacanthus
ENSELUG00000017369	exosc1	81	81.522	ENSAMEG00000000129	EXOSC1	94	81.522	Ailuropoda_melanoleuca
ENSELUG00000017369	exosc1	82	94.595	ENSACIG00000018956	exosc1	91	94.595	Amphilophus_citrinellus
ENSELUG00000017369	exosc1	87	91.371	ENSAOCG00000010699	exosc1	99	91.371	Amphiprion_ocellaris
ENSELUG00000017369	exosc1	80	83.889	ENSAPEG00000012690	exosc1	97	83.889	Amphiprion_percula
ENSELUG00000017369	exosc1	87	91.371	ENSATEG00000018683	exosc1	99	91.371	Anabas_testudineus
ENSELUG00000017369	exosc1	99	61.538	ENSACAG00000002101	EXOSC1	94	78.142	Anolis_carolinensis
ENSELUG00000017369	exosc1	97	72.455	ENSANAG00000034669	EXOSC1	94	80.978	Aotus_nancymaae
ENSELUG00000017369	exosc1	87	91.371	ENSACLG00000021243	exosc1	99	91.371	Astatotilapia_calliptera
ENSELUG00000017369	exosc1	87	88.832	ENSAMXG00000011116	exosc1	99	88.832	Astyanax_mexicanus
ENSELUG00000017369	exosc1	81	81.522	ENSBTAG00000012699	EXOSC1	94	81.522	Bos_taurus
ENSELUG00000017369	exosc1	80	35.263	WBGene00012966	exos-1	91	35.263	Caenorhabditis_elegans
ENSELUG00000017369	exosc1	97	72.455	ENSCJAG00000016586	EXOSC1	94	80.435	Callithrix_jacchus
ENSELUG00000017369	exosc1	88	76.119	ENSCAFG00000009068	EXOSC1	97	76.119	Canis_familiaris
ENSELUG00000017369	exosc1	88	76.119	ENSCAFG00020006002	EXOSC1	97	76.119	Canis_lupus_dingo
ENSELUG00000017369	exosc1	81	81.522	ENSCHIG00000015253	EXOSC1	94	81.522	Capra_hircus
ENSELUG00000017369	exosc1	97	71.856	ENSTSYG00000000760	EXOSC1	94	79.891	Carlito_syrichta
ENSELUG00000017369	exosc1	81	80.978	ENSCPOG00000001173	EXOSC1	94	80.978	Cavia_porcellus
ENSELUG00000017369	exosc1	97	41.212	ENSCCAG00000023986	EXOSC1	97	41.212	Cebus_capucinus
ENSELUG00000017369	exosc1	97	71.856	ENSCATG00000034114	EXOSC1	94	80.978	Cercocebus_atys
ENSELUG00000017369	exosc1	81	80.978	ENSCLAG00000002463	EXOSC1	94	80.978	Chinchilla_lanigera
ENSELUG00000017369	exosc1	81	80.435	ENSCSAG00000005870	EXOSC1	94	80.435	Chlorocebus_sabaeus
ENSELUG00000017369	exosc1	94	62.703	ENSCHOG00000006477	EXOSC1	95	67.978	Choloepus_hoffmanni
ENSELUG00000017369	exosc1	98	42.051	ENSCING00000022734	-	88	52.432	Ciona_intestinalis
ENSELUG00000017369	exosc1	98	44.103	ENSCSAVG00000010865	-	94	55.135	Ciona_savignyi
ENSELUG00000017369	exosc1	97	71.856	ENSCANG00000034159	EXOSC1	94	80.978	Colobus_angolensis_palliatus
ENSELUG00000017369	exosc1	81	79.891	ENSCGRG00001000335	Exosc1	94	79.891	Cricetulus_griseus_chok1gshd
ENSELUG00000017369	exosc1	81	79.891	ENSCGRG00000011602	Exosc1	94	79.891	Cricetulus_griseus_crigri
ENSELUG00000017369	exosc1	100	86.047	ENSCSEG00000007895	exosc1	97	86.047	Cynoglossus_semilaevis
ENSELUG00000017369	exosc1	87	84.772	ENSCVAG00000016748	exosc1	99	84.772	Cyprinodon_variegatus
ENSELUG00000017369	exosc1	87	89.848	ENSDARG00000059841	exosc1	99	89.848	Danio_rerio
ENSELUG00000017369	exosc1	66	76.552	ENSDNOG00000007983	EXOSC1	98	76.552	Dasypus_novemcinctus
ENSELUG00000017369	exosc1	81	80.435	ENSDORG00000016528	Exosc1	94	80.435	Dipodomys_ordii
ENSELUG00000017369	exosc1	94	40.625	FBgn0032346	Csl4	91	48.663	Drosophila_melanogaster
ENSELUG00000017369	exosc1	97	64.062	ENSETEG00000002469	-	94	78.804	Echinops_telfairi
ENSELUG00000017369	exosc1	96	52.332	ENSEBUG00000008164	exosc1	95	62.694	Eptatretus_burgeri
ENSELUG00000017369	exosc1	97	65.946	ENSEASG00005008684	EXOSC1	94	71.196	Equus_asinus_asinus
ENSELUG00000017369	exosc1	53	56.034	ENSECAG00000010621	EXOSC1	69	56.034	Equus_caballus
ENSELUG00000017369	exosc1	81	79.891	ENSEEUG00000005647	EXOSC1	94	79.891	Erinaceus_europaeus
ENSELUG00000017369	exosc1	97	72.455	ENSFCAG00000040563	EXOSC1	97	76.617	Felis_catus
ENSELUG00000017369	exosc1	97	64.583	ENSFALG00000008450	EXOSC1	94	79.348	Ficedula_albicollis
ENSELUG00000017369	exosc1	81	80.978	ENSFDAG00000000846	EXOSC1	94	80.978	Fukomys_damarensis
ENSELUG00000017369	exosc1	87	84.264	ENSFHEG00000009154	exosc1	99	84.264	Fundulus_heteroclitus
ENSELUG00000017369	exosc1	87	90.355	ENSGMOG00000008993	exosc1	99	90.355	Gadus_morhua
ENSELUG00000017369	exosc1	97	71.257	ENSGALG00000039917	EXOSC1	99	83.333	Gallus_gallus
ENSELUG00000017369	exosc1	100	81.395	ENSGAFG00000010265	exosc1	94	83.249	Gambusia_affinis
ENSELUG00000017369	exosc1	87	86.802	ENSGACG00000018936	exosc1	99	86.802	Gasterosteus_aculeatus
ENSELUG00000017369	exosc1	97	61.979	ENSGAGG00000019192	EXOSC1	94	77.717	Gopherus_agassizii
ENSELUG00000017369	exosc1	97	71.856	ENSGGOG00000003099	EXOSC1	97	71.856	Gorilla_gorilla
ENSELUG00000017369	exosc1	87	91.371	ENSHBUG00000017857	exosc1	96	95.135	Haplochromis_burtoni
ENSELUG00000017369	exosc1	81	80.435	ENSHGLG00000016927	EXOSC1	94	80.435	Heterocephalus_glaber_female
ENSELUG00000017369	exosc1	81	80.435	ENSHGLG00100012208	EXOSC1	94	80.435	Heterocephalus_glaber_male
ENSELUG00000017369	exosc1	87	88.832	ENSHCOG00000019882	exosc1	99	88.832	Hippocampus_comes
ENSELUG00000017369	exosc1	87	85.787	ENSIPUG00000007685	exosc1	99	85.787	Ictalurus_punctatus
ENSELUG00000017369	exosc1	81	80.435	ENSSTOG00000006615	EXOSC1	94	80.435	Ictidomys_tridecemlineatus
ENSELUG00000017369	exosc1	52	66.372	ENSSTOG00000029860	-	86	66.372	Ictidomys_tridecemlineatus
ENSELUG00000017369	exosc1	81	80.978	ENSJJAG00000013311	Exosc1	94	80.978	Jaculus_jaculus
ENSELUG00000017369	exosc1	100	84.884	ENSKMAG00000001202	exosc1	89	77.928	Kryptolebias_marmoratus
ENSELUG00000017369	exosc1	87	90.863	ENSLBEG00000011448	exosc1	99	90.863	Labrus_bergylta
ENSELUG00000017369	exosc1	99	65.714	ENSLOCG00000003776	exosc1	100	65.714	Lepisosteus_oculatus
ENSELUG00000017369	exosc1	81	80.435	ENSLAFG00000015983	EXOSC1	94	80.435	Loxodonta_africana
ENSELUG00000017369	exosc1	97	71.856	ENSMFAG00000001493	EXOSC1	94	80.978	Macaca_fascicularis
ENSELUG00000017369	exosc1	97	71.856	ENSMMUG00000020028	EXOSC1	97	71.856	Macaca_mulatta
ENSELUG00000017369	exosc1	97	71.856	ENSMNEG00000029816	EXOSC1	94	80.978	Macaca_nemestrina
ENSELUG00000017369	exosc1	97	62.632	ENSMLEG00000027643	EXOSC1	94	75.543	Mandrillus_leucophaeus
ENSELUG00000017369	exosc1	87	89.848	ENSMAMG00000012200	exosc1	99	89.848	Mastacembelus_armatus
ENSELUG00000017369	exosc1	87	91.371	ENSMZEG00005007042	exosc1	99	91.371	Maylandia_zebra
ENSELUG00000017369	exosc1	97	72.455	ENSMAUG00000020462	-	97	72.455	Mesocricetus_auratus
ENSELUG00000017369	exosc1	97	72.455	ENSMICG00000007664	EXOSC1	97	72.455	Microcebus_murinus
ENSELUG00000017369	exosc1	88	71.212	ENSMOCG00000017124	-	96	71.212	Microtus_ochrogaster
ENSELUG00000017369	exosc1	81	79.891	ENSMOCG00000006004	-	94	79.891	Microtus_ochrogaster
ENSELUG00000017369	exosc1	95	70.186	ENSMMOG00000021403	exosc1	95	73.224	Mola_mola
ENSELUG00000017369	exosc1	86	78.061	ENSMODG00000004213	EXOSC1	97	78.061	Monodelphis_domestica
ENSELUG00000017369	exosc1	88	88.384	ENSMALG00000007061	exosc1	99	88.384	Monopterus_albus
ENSELUG00000017369	exosc1	97	63.542	MGP_CAROLIEiJ_G0022959	Exosc1	94	79.348	Mus_caroli
ENSELUG00000017369	exosc1	81	79.348	ENSMUSG00000034321	Exosc1	94	79.348	Mus_musculus
ENSELUG00000017369	exosc1	81	79.891	MGP_PahariEiJ_G0014449	Exosc1	94	79.891	Mus_pahari
ENSELUG00000017369	exosc1	97	63.542	MGP_SPRETEiJ_G0023880	Exosc1	94	79.348	Mus_spretus
ENSELUG00000017369	exosc1	81	81.522	ENSMPUG00000017044	EXOSC1	94	81.522	Mustela_putorius_furo
ENSELUG00000017369	exosc1	81	80.978	ENSMLUG00000009228	EXOSC1	94	80.978	Myotis_lucifugus
ENSELUG00000017369	exosc1	97	62.500	ENSNGAG00000022033	Exosc1	94	78.261	Nannospalax_galili
ENSELUG00000017369	exosc1	100	72.941	ENSNBRG00000024007	exosc1	100	72.941	Neolamprologus_brichardi
ENSELUG00000017369	exosc1	97	71.856	ENSNLEG00000013872	EXOSC1	94	80.435	Nomascus_leucogenys
ENSELUG00000017369	exosc1	52	72.321	ENSMEUG00000002246	EXOSC1	97	72.321	Notamacropus_eugenii
ENSELUG00000017369	exosc1	81	80.435	ENSOPRG00000005065	EXOSC1	94	80.435	Ochotona_princeps
ENSELUG00000017369	exosc1	81	80.978	ENSODEG00000016709	EXOSC1	94	80.978	Octodon_degus
ENSELUG00000017369	exosc1	87	90.863	ENSONIG00000017683	exosc1	98	90.863	Oreochromis_niloticus
ENSELUG00000017369	exosc1	65	81.416	ENSOANG00000006563	EXOSC1	97	86.885	Ornithorhynchus_anatinus
ENSELUG00000017369	exosc1	97	59.375	ENSOCUG00000026461	-	94	75.000	Oryctolagus_cuniculus
ENSELUG00000017369	exosc1	81	79.459	ENSOCUG00000011898	-	94	79.459	Oryctolagus_cuniculus
ENSELUG00000017369	exosc1	82	89.305	ENSORLG00000011595	exosc1	96	89.305	Oryzias_latipes
ENSELUG00000017369	exosc1	82	89.305	ENSORLG00020005831	exosc1	96	89.305	Oryzias_latipes_hni
ENSELUG00000017369	exosc1	82	88.770	ENSORLG00015004317	exosc1	96	88.770	Oryzias_latipes_hsok
ENSELUG00000017369	exosc1	100	69.189	ENSOMEG00000013907	exosc1	95	75.269	Oryzias_melastigma
ENSELUG00000017369	exosc1	81	80.435	ENSOGAG00000016259	EXOSC1	94	80.435	Otolemur_garnettii
ENSELUG00000017369	exosc1	81	80.978	ENSOARG00000010136	EXOSC1	94	80.978	Ovis_aries
ENSELUG00000017369	exosc1	97	62.371	ENSPPAG00000039842	EXOSC1	94	75.269	Pan_paniscus
ENSELUG00000017369	exosc1	97	72.455	ENSPPRG00000023366	EXOSC1	94	81.522	Panthera_pardus
ENSELUG00000017369	exosc1	97	72.455	ENSPTIG00000017701	EXOSC1	94	81.522	Panthera_tigris_altaica
ENSELUG00000017369	exosc1	97	71.856	ENSPTRG00000002808	EXOSC1	94	80.978	Pan_troglodytes
ENSELUG00000017369	exosc1	97	71.856	ENSPANG00000021324	EXOSC1	94	80.978	Papio_anubis
ENSELUG00000017369	exosc1	99	72.449	ENSPKIG00000016037	exosc1	96	89.247	Paramormyrops_kingsleyae
ENSELUG00000017369	exosc1	69	80.000	ENSPSIG00000013571	EXOSC1	97	80.000	Pelodiscus_sinensis
ENSELUG00000017369	exosc1	99	86.550	ENSPMGG00000014002	exosc1	100	86.550	Periophthalmus_magnuspinnatus
ENSELUG00000017369	exosc1	81	79.891	ENSPEMG00000010710	-	94	79.891	Peromyscus_maniculatus_bairdii
ENSELUG00000017369	exosc1	86	67.692	ENSPMAG00000000195	exosc1	99	67.692	Petromyzon_marinus
ENSELUG00000017369	exosc1	86	76.923	ENSPCIG00000002210	EXOSC1	96	76.923	Phascolarctos_cinereus
ENSELUG00000017369	exosc1	87	84.264	ENSPFOG00000006755	exosc1	94	84.264	Poecilia_formosa
ENSELUG00000017369	exosc1	92	82.278	ENSPLAG00000005880	exosc1	99	84.264	Poecilia_latipinna
ENSELUG00000017369	exosc1	100	81.395	ENSPMEG00000015598	exosc1	94	84.264	Poecilia_mexicana
ENSELUG00000017369	exosc1	100	80.814	ENSPREG00000000405	exosc1	95	80.814	Poecilia_reticulata
ENSELUG00000017369	exosc1	81	80.978	ENSPPYG00000002531	EXOSC1	94	80.978	Pongo_abelii
ENSELUG00000017369	exosc1	81	79.891	ENSPCAG00000009135	EXOSC1	94	79.891	Procavia_capensis
ENSELUG00000017369	exosc1	97	72.121	ENSPCOG00000027539	EXOSC1	97	72.121	Propithecus_coquereli
ENSELUG00000017369	exosc1	81	80.978	ENSPVAG00000003372	EXOSC1	94	80.978	Pteropus_vampyrus
ENSELUG00000017369	exosc1	100	88.372	ENSPNYG00000021745	exosc1	99	91.371	Pundamilia_nyererei
ENSELUG00000017369	exosc1	93	86.250	ENSPNAG00000001944	exosc1	99	87.817	Pygocentrus_nattereri
ENSELUG00000017369	exosc1	81	79.891	ENSRNOG00000048708	Exosc1	94	79.891	Rattus_norvegicus
ENSELUG00000017369	exosc1	97	71.856	ENSRBIG00000035618	EXOSC1	94	80.978	Rhinopithecus_bieti
ENSELUG00000017369	exosc1	97	71.856	ENSRROG00000032589	EXOSC1	97	71.856	Rhinopithecus_roxellana
ENSELUG00000017369	exosc1	55	45.918	YNL232W	CSL4	54	38.750	Saccharomyces_cerevisiae
ENSELUG00000017369	exosc1	97	72.455	ENSSBOG00000000359	EXOSC1	94	80.978	Saimiri_boliviensis_boliviensis
ENSELUG00000017369	exosc1	64	88.966	ENSSHAG00000018219	EXOSC1	99	88.966	Sarcophilus_harrisii
ENSELUG00000017369	exosc1	87	84.264	ENSSFOG00015009069	exosc1	99	84.264	Scleropages_formosus
ENSELUG00000017369	exosc1	98	78.107	ENSSFOG00015016289	-	96	87.634	Scleropages_formosus
ENSELUG00000017369	exosc1	87	90.863	ENSSMAG00000003721	exosc1	99	90.863	Scophthalmus_maximus
ENSELUG00000017369	exosc1	87	91.371	ENSSDUG00000002993	exosc1	99	91.371	Seriola_dumerili
ENSELUG00000017369	exosc1	87	91.371	ENSSLDG00000025181	exosc1	99	91.371	Seriola_lalandi_dorsalis
ENSELUG00000017369	exosc1	97	62.500	ENSSARG00000000162	EXOSC1	94	68.478	Sorex_araneus
ENSELUG00000017369	exosc1	97	60.417	ENSSPUG00000012263	EXOSC1	94	75.543	Sphenodon_punctatus
ENSELUG00000017369	exosc1	99	73.593	ENSSPAG00000016792	exosc1	98	73.593	Stegastes_partitus
ENSELUG00000017369	exosc1	81	80.435	ENSSSCG00000010518	EXOSC1	86	80.435	Sus_scrofa
ENSELUG00000017369	exosc1	86	76.410	ENSTGUG00000009692	EXOSC1	98	76.410	Taeniopygia_guttata
ENSELUG00000017369	exosc1	85	79.167	ENSTRUG00000007706	exosc1	98	79.167	Takifugu_rubripes
ENSELUG00000017369	exosc1	85	78.974	ENSTNIG00000014079	exosc1	97	78.974	Tetraodon_nigroviridis
ENSELUG00000017369	exosc1	97	62.304	ENSTBEG00000006011	EXOSC1	94	74.457	Tupaia_belangeri
ENSELUG00000017369	exosc1	81	81.319	ENSTTRG00000009887	EXOSC1	99	81.319	Tursiops_truncatus
ENSELUG00000017369	exosc1	97	62.424	ENSUAMG00000010266	EXOSC1	97	62.424	Ursus_americanus
ENSELUG00000017369	exosc1	97	62.424	ENSUMAG00000022002	EXOSC1	97	62.424	Ursus_maritimus
ENSELUG00000017369	exosc1	88	76.119	ENSVVUG00000023192	EXOSC1	65	76.119	Vulpes_vulpes
ENSELUG00000017369	exosc1	98	62.887	ENSXETG00000003434	exosc1	95	78.261	Xenopus_tropicalis
ENSELUG00000017369	exosc1	70	83.471	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSELUG00000017369	exosc1	100	80.814	ENSXMAG00000023382	exosc1	95	80.814	Xiphophorus_maculatus