EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017403 (Gene tree)
Gene ID: 105026808
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 7
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 10101 bases
Position: chrLG01:6767855-6777955
Accession: 105026808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037686	RRM_1	PF00076.22	1.2e-15	1	1
ENSELUP00000017735	RRM_1	PF00076.22	1.3e-15	1	1
ENSELUP00000017729	RRM_1	PF00076.22	1.4e-15	1	1
ENSELUP00000037683	RRM_1	PF00076.22	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000040301	-	688	XM_010898534	ENSELUP00000017735	226 (aa)	XP_010896836	-
ENSELUT00000027414	-	694	XM_020047097	ENSELUP00000017729	228 (aa)	XP_019902656	UPI000973450E
ENSELUT00000027470	-	621	-	ENSELUP00000037686	206 (aa)	-	-
ENSELUT00000040302	-	1938	XM_010898533	ENSELUP00000037683	239 (aa)	XP_010896835	UPI00057689C5

Gene Model

Click here to download ENSELUG00000017403's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017403	-	77	56.897	ENSELUG00000018155	srsf7b	86	72.034
ENSELUG00000017403	-	60	90.244	ENSELUG00000016922	srsf7a	88	90.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017403	-	53	89.908	ENSGACG00000012311	-	99	67.159	Gasterosteus_aculeatus
ENSELUG00000017403	-	54	90.991	ENSONIG00000001360	-	80	84.186	Oreochromis_niloticus