EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017412 (Gene tree)
Gene ID: 105023402
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein 5-1-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 25615 bases
Position: chrLG03:9416566-9442180
Accession: 105023402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017757	zf-C2H2	PF00096.26	1.5e-17	1	3
ENSELUP00000017757	zf-C2H2	PF00096.26	1.5e-17	2	3
ENSELUP00000017757	zf-C2H2	PF00096.26	1.5e-17	3	3
ENSELUP00000017760	zf-C2H2	PF00096.26	2.1e-16	1	2
ENSELUP00000017760	zf-C2H2	PF00096.26	2.1e-16	2	2
ENSELUP00000017764	zf-C2H2	PF00096.26	1.2e-12	1	3
ENSELUP00000017764	zf-C2H2	PF00096.26	1.2e-12	2	3
ENSELUP00000017764	zf-C2H2	PF00096.26	1.2e-12	3	3
ENSELUP00000017760	zf-met	PF12874.7	9.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027453	-	3811	XM_010892536	ENSELUP00000017760	498 (aa)	XP_010890838	UPI000575FC07
ENSELUT00000027458	-	5803	XM_010892557	ENSELUP00000017764	470 (aa)	XP_010890859	UPI0005767279
ENSELUT00000040308	-	3925	XM_010892525	ENSELUP00000017757	483 (aa)	XP_010890827	UPI000577F360

Gene Model

Click here to download ENSELUG00000017412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017412	-	53	47.143	ENSELUG00000000281	-	67	36.747
ENSELUG00000017412	-	55	51.724	ENSELUG00000024007	-	98	51.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017412	-	64	47.794	ENSHBUG00000018916	-	81	47.794	Haplochromis_burtoni
ENSELUG00000017412	-	99	43.648	ENSMALG00000010962	-	98	43.852	Monopterus_albus
ENSELUG00000017412	-	99	40.244	ENSORLG00020019341	-	86	75.510	Oryzias_latipes_hni