EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017458 (Gene tree)
Gene ID: 105023810
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 11575 bases
Position: chrLG01:24619416-24630990
Accession: 105023810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037715	HARE-HTH	PF05066.13	2.4e-15	1	1
ENSELUP00000017777	HARE-HTH	PF05066.13	2.6e-15	1	1
ENSELUP00000017793	HARE-HTH	PF05066.13	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027577	-	1931	XM_010893277	ENSELUP00000017793	568 (aa)	XP_010891579	UPI0005762B68
ENSELUT00000027424	-	1239	-	ENSELUP00000037680	412 (aa)	-	-
ENSELUT00000027471	-	2228	XM_020048063	ENSELUP00000017777	546 (aa)	XP_019903622	UPI000973457B
ENSELUT00000027488	-	1994	XM_010893276	ENSELUP00000037715	589 (aa)	XP_010891578	UPI000578091D

Gene Model

Click here to download ENSELUG00000017458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017458	tbrg1	99	80.109	ENSAPOG00000017352	tbrg1	99	80.109	Acanthochromis_polyacanthus
ENSELUG00000017458	tbrg1	91	78.614	ENSACIG00000021274	tbrg1	94	79.010	Amphilophus_citrinellus
ENSELUG00000017458	tbrg1	99	79.927	ENSAOCG00000018605	tbrg1	99	79.927	Amphiprion_ocellaris
ENSELUG00000017458	tbrg1	99	79.927	ENSAPEG00000022443	tbrg1	99	79.927	Amphiprion_percula
ENSELUG00000017458	tbrg1	99	79.562	ENSATEG00000023537	tbrg1	99	79.562	Anabas_testudineus
ENSELUG00000017458	tbrg1	99	78.467	ENSACLG00000000281	tbrg1	99	78.958	Astatotilapia_calliptera
ENSELUG00000017458	tbrg1	99	72.364	ENSAMXG00000008381	tbrg1	99	72.364	Astyanax_mexicanus
ENSELUG00000017458	tbrg1	99	76.182	ENSCSEG00000002445	tbrg1	99	76.182	Cynoglossus_semilaevis
ENSELUG00000017458	tbrg1	99	72.595	ENSCVAG00000019626	tbrg1	99	74.047	Cyprinodon_variegatus
ENSELUG00000017458	tbrg1	99	72.445	ENSDARG00000074996	tbrg1	99	72.628	Danio_rerio
ENSELUG00000017458	tbrg1	91	48.842	ENSEBUG00000014060	tbrg1	98	48.308	Eptatretus_burgeri
ENSELUG00000017458	tbrg1	86	71.487	ENSFHEG00000004283	tbrg1	92	72.860	Fundulus_heteroclitus
ENSELUG00000017458	tbrg1	99	73.866	ENSGAFG00000000204	tbrg1	99	74.410	Gambusia_affinis
ENSELUG00000017458	tbrg1	99	78.467	ENSHBUG00000004935	tbrg1	99	78.467	Haplochromis_burtoni
ENSELUG00000017458	tbrg1	99	68.165	ENSHCOG00000010588	tbrg1	99	68.705	Hippocampus_comes
ENSELUG00000017458	tbrg1	98	71.927	ENSIPUG00000008697	tbrg1	98	73.394	Ictalurus_punctatus
ENSELUG00000017458	tbrg1	99	75.956	ENSKMAG00000002775	tbrg1	99	76.321	Kryptolebias_marmoratus
ENSELUG00000017458	tbrg1	99	78.324	ENSLBEG00000017559	tbrg1	94	81.386	Labrus_bergylta
ENSELUG00000017458	tbrg1	99	77.899	ENSLOCG00000003093	tbrg1	99	77.899	Lepisosteus_oculatus
ENSELUG00000017458	tbrg1	99	79.015	ENSMAMG00000000876	tbrg1	99	79.562	Mastacembelus_armatus
ENSELUG00000017458	tbrg1	99	78.467	ENSMZEG00005013545	tbrg1	93	77.798	Maylandia_zebra
ENSELUG00000017458	tbrg1	93	76.015	ENSMMOG00000005314	tbrg1	94	76.209	Mola_mola
ENSELUG00000017458	tbrg1	92	80.273	ENSMALG00000011630	tbrg1	99	80.273	Monopterus_albus
ENSELUG00000017458	tbrg1	97	78.625	ENSNBRG00000017490	tbrg1	99	78.625	Neolamprologus_brichardi
ENSELUG00000017458	tbrg1	99	78.650	ENSONIG00000005284	tbrg1	99	78.650	Oreochromis_niloticus
ENSELUG00000017458	tbrg1	99	73.540	ENSORLG00000014519	tbrg1	99	73.540	Oryzias_latipes
ENSELUG00000017458	tbrg1	99	73.540	ENSORLG00020009567	tbrg1	99	73.540	Oryzias_latipes_hni
ENSELUG00000017458	tbrg1	99	73.358	ENSORLG00015000448	tbrg1	99	73.358	Oryzias_latipes_hsok
ENSELUG00000017458	tbrg1	99	74.908	ENSOMEG00000006130	tbrg1	99	75.458	Oryzias_melastigma
ENSELUG00000017458	tbrg1	98	75.373	ENSPKIG00000012274	tbrg1	99	74.266	Paramormyrops_kingsleyae
ENSELUG00000017458	tbrg1	99	72.432	ENSPMGG00000015968	tbrg1	99	72.432	Periophthalmus_magnuspinnatus
ENSELUG00000017458	tbrg1	99	74.275	ENSPFOG00000004279	tbrg1	99	74.773	Poecilia_formosa
ENSELUG00000017458	tbrg1	99	74.457	ENSPLAG00000001227	tbrg1	99	75.763	Poecilia_latipinna
ENSELUG00000017458	tbrg1	99	74.275	ENSPMEG00000000955	tbrg1	99	74.638	Poecilia_mexicana
ENSELUG00000017458	tbrg1	99	73.866	ENSPREG00000005246	tbrg1	99	73.866	Poecilia_reticulata
ENSELUG00000017458	tbrg1	87	78.958	ENSPNYG00000012625	tbrg1	99	78.958	Pundamilia_nyererei
ENSELUG00000017458	tbrg1	99	70.417	ENSPNAG00000028332	tbrg1	99	72.167	Pygocentrus_nattereri
ENSELUG00000017458	tbrg1	93	78.585	ENSSFOG00015009308	tbrg1	89	77.159	Scleropages_formosus
ENSELUG00000017458	tbrg1	99	76.727	ENSSMAG00000002529	tbrg1	98	78.101	Scophthalmus_maximus
ENSELUG00000017458	tbrg1	99	79.781	ENSSDUG00000013674	tbrg1	100	79.781	Seriola_dumerili
ENSELUG00000017458	tbrg1	91	81.569	ENSSLDG00000008932	tbrg1	98	81.569	Seriola_lalandi_dorsalis
ENSELUG00000017458	tbrg1	85	81.197	ENSSPAG00000004808	tbrg1	99	81.197	Stegastes_partitus
ENSELUG00000017458	tbrg1	93	73.204	ENSTRUG00000005960	tbrg1	97	73.204	Takifugu_rubripes
ENSELUG00000017458	tbrg1	99	73.684	ENSXMAG00000001551	tbrg1	99	74.229	Xiphophorus_maculatus