EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017517 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5330 bases
Position: chrLG09:16706772-16712101
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037777	zf-met	PF12874.7	2.5e-14	1	2
ENSELUP00000037777	zf-met	PF12874.7	2.5e-14	2	2
ENSELUP00000037790	zf-met	PF12874.7	3e-05	1	1
ENSELUP00000037777	zf-C2H2_jaz	PF12171.8	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027607	-	825	-	ENSELUP00000037777	274 (aa)	-	-
ENSELUT00000027626	-	744	-	ENSELUP00000037790	149 (aa)	-	-

Gene Model

Click here to download ENSELUG00000017517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017517	-	84	37.008	ENSELUG00000011376	znf346	59	38.667
ENSELUG00000017517	-	60	85.393	ENSELUG00000021817	zgc:171482	97	64.706
ENSELUG00000017517	-	69	61.165	ENSELUG00000005097	zmat4a	78	56.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017517	-	60	84.444	ENSAPOG00000019970	zgc:171482	80	68.750	Acanthochromis_polyacanthus
ENSELUG00000017517	-	60	84.444	ENSACIG00000021512	zgc:171482	87	72.650	Amphilophus_citrinellus
ENSELUG00000017517	-	60	85.393	ENSAOCG00000000751	zgc:171482	88	70.833	Amphiprion_ocellaris
ENSELUG00000017517	-	60	85.393	ENSAPEG00000014154	zgc:171482	86	70.833	Amphiprion_percula
ENSELUG00000017517	-	60	84.444	ENSATEG00000001371	zgc:171482	81	65.241	Anabas_testudineus
ENSELUG00000017517	-	97	59.333	ENSACLG00000010511	zgc:171482	95	63.768	Astatotilapia_calliptera
ENSELUG00000017517	-	60	87.640	ENSAMXG00000002299	zgc:171482	92	71.545	Astyanax_mexicanus
ENSELUG00000017517	-	60	84.270	ENSCSEG00000006509	zgc:171482	99	58.228	Cynoglossus_semilaevis
ENSELUG00000017517	-	60	84.444	ENSCVAG00000013606	zgc:171482	81	66.486	Cyprinodon_variegatus
ENSELUG00000017517	-	60	84.444	ENSDARG00000074415	zgc:171482	88	73.109	Danio_rerio
ENSELUG00000017517	-	60	85.393	ENSFHEG00000002233	zgc:171482	81	73.684	Fundulus_heteroclitus
ENSELUG00000017517	-	60	83.333	ENSGMOG00000010508	zgc:171482	81	66.667	Gadus_morhua
ENSELUG00000017517	-	60	84.444	ENSGAFG00000009398	zgc:171482	99	60.127	Gambusia_affinis
ENSELUG00000017517	-	60	84.444	ENSGACG00000007680	zgc:171482	81	63.684	Gasterosteus_aculeatus
ENSELUG00000017517	-	97	58.333	ENSHBUG00000023289	zgc:171482	93	68.800	Haplochromis_burtoni
ENSELUG00000017517	-	93	60.000	ENSHCOG00000018086	zgc:171482	90	70.248	Hippocampus_comes
ENSELUG00000017517	-	60	86.517	ENSIPUG00000000361	zgc:171482	89	70.968	Ictalurus_punctatus
ENSELUG00000017517	-	60	83.333	ENSKMAG00000005077	zgc:171482	69	68.750	Kryptolebias_marmoratus
ENSELUG00000017517	-	60	84.270	ENSLBEG00000023823	zgc:171482	85	70.000	Labrus_bergylta
ENSELUG00000017517	-	60	86.667	ENSLOCG00000008863	zgc:171482	78	64.324	Lepisosteus_oculatus
ENSELUG00000017517	-	60	85.393	ENSMAMG00000001031	zgc:171482	97	57.692	Mastacembelus_armatus
ENSELUG00000017517	-	60	81.111	ENSMZEG00005027721	zgc:171482	81	64.130	Maylandia_zebra
ENSELUG00000017517	-	60	84.444	ENSMMOG00000010523	zgc:171482	95	68.800	Mola_mola
ENSELUG00000017517	-	60	84.444	ENSMALG00000017883	zgc:171482	81	65.775	Monopterus_albus
ENSELUG00000017517	-	60	85.393	ENSNBRG00000021035	zgc:171482	87	72.650	Neolamprologus_brichardi
ENSELUG00000017517	-	60	84.444	ENSONIG00000018365	zgc:171482	80	65.405	Oreochromis_niloticus
ENSELUG00000017517	-	60	85.393	ENSORLG00000007607	zgc:171482	80	73.684	Oryzias_latipes
ENSELUG00000017517	-	60	85.393	ENSORLG00020003563	zgc:171482	80	73.684	Oryzias_latipes_hni
ENSELUG00000017517	-	60	85.393	ENSORLG00015008552	zgc:171482	80	73.684	Oryzias_latipes_hsok
ENSELUG00000017517	-	60	85.393	ENSOMEG00000003526	zgc:171482	80	73.684	Oryzias_melastigma
ENSELUG00000017517	-	60	82.222	ENSPKIG00000016244	zgc:171482	94	65.909	Paramormyrops_kingsleyae
ENSELUG00000017517	-	60	84.444	ENSPKIG00000015911	-	94	66.176	Paramormyrops_kingsleyae
ENSELUG00000017517	-	60	84.444	ENSPMGG00000020230	zgc:171482	83	60.606	Periophthalmus_magnuspinnatus
ENSELUG00000017517	-	60	84.444	ENSPFOG00000001974	zgc:171482	79	61.616	Poecilia_formosa
ENSELUG00000017517	-	60	84.444	ENSPLAG00000003327	zgc:171482	80	69.143	Poecilia_latipinna
ENSELUG00000017517	-	60	84.444	ENSPMEG00000004988	zgc:171482	95	59.006	Poecilia_mexicana
ENSELUG00000017517	-	60	85.393	ENSPREG00000019241	zgc:171482	98	65.217	Poecilia_reticulata
ENSELUG00000017517	-	97	59.333	ENSPNYG00000007773	zgc:171482	95	63.768	Pundamilia_nyererei
ENSELUG00000017517	-	60	85.556	ENSPNAG00000007619	zgc:171482	80	64.362	Pygocentrus_nattereri
ENSELUG00000017517	-	60	80.000	ENSSFOG00015016149	zgc:171482	94	68.908	Scleropages_formosus
ENSELUG00000017517	-	60	86.667	ENSSFOG00015021238	zgc:171482	80	73.950	Scleropages_formosus
ENSELUG00000017517	-	60	85.393	ENSSMAG00000002715	zgc:171482	74	71.795	Scophthalmus_maximus
ENSELUG00000017517	-	60	85.393	ENSSDUG00000008773	zgc:171482	88	68.254	Seriola_dumerili
ENSELUG00000017517	-	60	85.393	ENSSLDG00000019510	zgc:171482	88	68.254	Seriola_lalandi_dorsalis
ENSELUG00000017517	-	60	84.444	ENSSPAG00000013724	zgc:171482	98	68.800	Stegastes_partitus
ENSELUG00000017517	-	99	58.108	ENSTRUG00000005705	zgc:171482	67	71.930	Takifugu_rubripes
ENSELUG00000017517	-	60	55.556	ENSTNIG00000008679	zgc:171482	81	50.538	Tetraodon_nigroviridis
ENSELUG00000017517	-	60	78.652	ENSXMAG00000002641	zgc:171482	99	56.329	Xiphophorus_maculatus