EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000017544 (Gene tree)
Gene ID: 105013712
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 11777 bases
Position: chrLG12:15221824-15233600
Accession: 105013712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000017921	B3_4	PF03483.17	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000027644	-	3070	XM_010875436	ENSELUP00000017921	578 (aa)	XP_010873738	UPI000577F960

Gene Model

Click here to download ENSELUG00000017544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017544	lrrc47	98	52.115	ENSG00000130764	LRRC47	99	51.078	Homo_sapiens
ENSELUG00000017544	lrrc47	98	71.076	ENSAPOG00000019553	lrrc47	100	71.076	Acanthochromis_polyacanthus
ENSELUG00000017544	lrrc47	74	55.479	ENSAMEG00000009152	LRRC47	93	55.479	Ailuropoda_melanoleuca
ENSELUG00000017544	lrrc47	67	61.381	ENSAPLG00000003167	LRRC47	99	62.148	Anas_platyrhynchos
ENSELUG00000017544	lrrc47	66	59.585	ENSACAG00000008267	LRRC47	98	59.947	Anolis_carolinensis
ENSELUG00000017544	lrrc47	98	51.351	ENSANAG00000025576	LRRC47	99	49.662	Aotus_nancymaae
ENSELUG00000017544	lrrc47	97	50.598	ENSBTAG00000004738	LRRC47	99	50.934	Bos_taurus
ENSELUG00000017544	lrrc47	97	51.458	ENSCAFG00000019492	LRRC47	99	50.673	Canis_familiaris
ENSELUG00000017544	lrrc47	97	51.635	ENSCAFG00020009667	LRRC47	99	51.807	Canis_lupus_dingo
ENSELUG00000017544	lrrc47	97	50.683	ENSCHIG00000022607	LRRC47	98	51.718	Capra_hircus
ENSELUG00000017544	lrrc47	93	51.773	ENSTSYG00000009326	LRRC47	97	52.257	Carlito_syrichta
ENSELUG00000017544	lrrc47	65	59.432	ENSCAPG00000016517	LRRC47	99	58.915	Cavia_aperea
ENSELUG00000017544	lrrc47	99	51.759	ENSCPOG00000014931	LRRC47	97	51.424	Cavia_porcellus
ENSELUG00000017544	lrrc47	98	50.845	ENSCCAG00000024895	LRRC47	99	50.169	Cebus_capucinus
ENSELUG00000017544	lrrc47	98	51.939	ENSCATG00000029337	LRRC47	99	50.909	Cercocebus_atys
ENSELUG00000017544	lrrc47	97	51.027	ENSCLAG00000006093	LRRC47	99	50.685	Chinchilla_lanigera
ENSELUG00000017544	lrrc47	98	52.284	ENSCSAG00000000727	LRRC47	99	51.244	Chlorocebus_sabaeus
ENSELUG00000017544	lrrc47	98	48.926	ENSCPBG00000019404	LRRC47	98	49.664	Chrysemys_picta_bellii
ENSELUG00000017544	lrrc47	78	54.506	ENSCANG00000030701	LRRC47	96	53.222	Colobus_angolensis_palliatus
ENSELUG00000017544	lrrc47	97	51.613	ENSCGRG00001015159	Lrrc47	91	50.000	Cricetulus_griseus_chok1gshd
ENSELUG00000017544	lrrc47	67	59.000	ENSCGRG00000017336	Lrrc47	99	58.056	Cricetulus_griseus_crigri
ENSELUG00000017544	lrrc47	98	66.084	ENSCSEG00000006217	lrrc47	97	66.432	Cynoglossus_semilaevis
ENSELUG00000017544	lrrc47	65	59.432	ENSDORG00000016594	Lrrc47	99	58.915	Dipodomys_ordii
ENSELUG00000017544	lrrc47	97	52.487	ENSEASG00005021788	LRRC47	98	52.487	Equus_asinus_asinus
ENSELUG00000017544	lrrc47	96	53.114	ENSECAG00000022472	LRRC47	90	52.641	Equus_caballus
ENSELUG00000017544	lrrc47	92	49.640	ENSFCAG00000011632	LRRC47	98	48.673	Felis_catus
ENSELUG00000017544	lrrc47	70	60.945	ENSFALG00000009631	LRRC47	91	60.199	Ficedula_albicollis
ENSELUG00000017544	lrrc47	98	67.663	ENSGMOG00000015674	lrrc47	100	67.539	Gadus_morhua
ENSELUG00000017544	lrrc47	97	49.654	ENSGALG00000050995	LRRC47	99	50.172	Gallus_gallus
ENSELUG00000017544	lrrc47	98	65.789	ENSGACG00000005550	lrrc47	99	65.789	Gasterosteus_aculeatus
ENSELUG00000017544	lrrc47	98	49.007	ENSGAGG00000022584	LRRC47	98	50.588	Gopherus_agassizii
ENSELUG00000017544	lrrc47	98	52.284	ENSGGOG00000015571	LRRC47	99	51.244	Gorilla_gorilla
ENSELUG00000017544	lrrc47	98	49.577	ENSHGLG00000018278	LRRC47	96	49.577	Heterocephalus_glaber_female
ENSELUG00000017544	lrrc47	70	55.718	ENSHGLG00100008507	LRRC47	99	55.961	Heterocephalus_glaber_male
ENSELUG00000017544	lrrc47	99	67.361	ENSHCOG00000006348	lrrc47	99	67.938	Hippocampus_comes
ENSELUG00000017544	lrrc47	98	51.178	ENSSTOG00000027559	LRRC47	99	51.765	Ictidomys_tridecemlineatus
ENSELUG00000017544	lrrc47	97	52.300	ENSJJAG00000017474	Lrrc47	99	51.148	Jaculus_jaculus
ENSELUG00000017544	lrrc47	98	69.841	ENSKMAG00000003414	lrrc47	100	69.718	Kryptolebias_marmoratus
ENSELUG00000017544	lrrc47	98	51.946	ENSLAFG00000011657	LRRC47	99	51.438	Loxodonta_africana
ENSELUG00000017544	lrrc47	98	38.487	ENSMFAG00000045730	LRRC47	90	58.333	Macaca_fascicularis
ENSELUG00000017544	lrrc47	97	52.901	ENSMNEG00000042488	LRRC47	99	52.542	Macaca_nemestrina
ENSELUG00000017544	lrrc47	76	54.286	ENSMLEG00000043735	LRRC47	90	52.979	Mandrillus_leucophaeus
ENSELUG00000017544	lrrc47	95	52.941	ENSMAUG00000021337	Lrrc47	96	52.332	Mesocricetus_auratus
ENSELUG00000017544	lrrc47	98	51.356	ENSMICG00000026816	LRRC47	99	51.017	Microcebus_murinus
ENSELUG00000017544	lrrc47	98	52.055	ENSMOCG00000021279	Lrrc47	99	52.479	Microtus_ochrogaster
ENSELUG00000017544	lrrc47	98	68.254	ENSMMOG00000017007	lrrc47	100	69.312	Mola_mola
ENSELUG00000017544	lrrc47	97	41.946	ENSMODG00000006554	LRRC47	98	51.370	Monodelphis_domestica
ENSELUG00000017544	lrrc47	97	52.740	MGP_CAROLIEiJ_G0026864	Lrrc47	99	52.115	Mus_caroli
ENSELUG00000017544	lrrc47	97	52.911	ENSMUSG00000029028	Lrrc47	99	52.284	Mus_musculus
ENSELUG00000017544	lrrc47	97	52.144	MGP_PahariEiJ_G0029212	Lrrc47	99	51.607	Mus_pahari
ENSELUG00000017544	lrrc47	97	52.911	MGP_SPRETEiJ_G0027857	Lrrc47	99	52.284	Mus_spretus
ENSELUG00000017544	lrrc47	65	58.808	ENSMPUG00000007321	LRRC47	75	58.290	Mustela_putorius_furo
ENSELUG00000017544	lrrc47	97	49.742	ENSNGAG00000022153	Lrrc47	99	49.577	Nannospalax_galili
ENSELUG00000017544	lrrc47	98	51.613	ENSNLEG00000008131	LRRC47	99	50.749	Nomascus_leucogenys
ENSELUG00000017544	lrrc47	82	50.806	ENSODEG00000010882	LRRC47	93	53.024	Octodon_degus
ENSELUG00000017544	lrrc47	94	67.518	ENSORLG00000002532	lrrc47	100	66.971	Oryzias_latipes
ENSELUG00000017544	lrrc47	98	67.901	ENSORLG00020019601	lrrc47	100	67.372	Oryzias_latipes_hni
ENSELUG00000017544	lrrc47	98	67.725	ENSORLG00015014040	lrrc47	100	67.196	Oryzias_latipes_hsok
ENSELUG00000017544	lrrc47	98	68.607	ENSOMEG00000008989	lrrc47	100	67.901	Oryzias_melastigma
ENSELUG00000017544	lrrc47	98	52.115	ENSOGAG00000001553	LRRC47	99	52.115	Otolemur_garnettii
ENSELUG00000017544	lrrc47	97	49.147	ENSOARG00000015290	LRRC47	99	50.000	Ovis_aries
ENSELUG00000017544	lrrc47	73	57.339	ENSPPAG00000036370	-	99	55.804	Pan_paniscus
ENSELUG00000017544	lrrc47	97	50.171	ENSPPRG00000005261	LRRC47	99	49.832	Panthera_pardus
ENSELUG00000017544	lrrc47	98	52.284	ENSPTRG00000000068	LRRC47	99	51.244	Pan_troglodytes
ENSELUG00000017544	lrrc47	98	52.108	ENSPANG00000012437	LRRC47	99	51.074	Papio_anubis
ENSELUG00000017544	lrrc47	65	62.078	ENSPSIG00000004196	LRRC47	97	61.702	Pelodiscus_sinensis
ENSELUG00000017544	lrrc47	65	61.458	ENSPEMG00000021068	Lrrc47	99	60.519	Peromyscus_maniculatus_bairdii
ENSELUG00000017544	lrrc47	97	52.513	ENSPCIG00000003638	LRRC47	98	52.405	Phascolarctos_cinereus
ENSELUG00000017544	lrrc47	92	67.481	ENSPFOG00000000992	lrrc47	94	66.917	Poecilia_formosa
ENSELUG00000017544	lrrc47	97	67.851	ENSPLAG00000008077	lrrc47	99	67.318	Poecilia_latipinna
ENSELUG00000017544	lrrc47	97	68.206	ENSPMEG00000007367	lrrc47	99	67.730	Poecilia_mexicana
ENSELUG00000017544	lrrc47	98	52.284	ENSPPYG00000001960	LRRC47	99	51.244	Pongo_abelii
ENSELUG00000017544	lrrc47	97	52.308	ENSPCOG00000019161	LRRC47	99	52.122	Propithecus_coquereli
ENSELUG00000017544	lrrc47	98	51.453	ENSPVAG00000009839	LRRC47	99	50.940	Pteropus_vampyrus
ENSELUG00000017544	lrrc47	97	64.171	ENSPNAG00000017982	lrrc47	98	63.523	Pygocentrus_nattereri
ENSELUG00000017544	lrrc47	97	53.448	ENSRNOG00000024796	Lrrc47	98	52.840	Rattus_norvegicus
ENSELUG00000017544	lrrc47	98	51.939	ENSRBIG00000019437	LRRC47	99	50.909	Rhinopithecus_bieti
ENSELUG00000017544	lrrc47	98	51.939	ENSRROG00000043182	LRRC47	99	50.909	Rhinopithecus_roxellana
ENSELUG00000017544	lrrc47	78	55.246	ENSSBOG00000026334	LRRC47	92	53.463	Saimiri_boliviensis_boliviensis
ENSELUG00000017544	lrrc47	97	47.341	ENSSHAG00000007360	LRRC47	99	47.279	Sarcophilus_harrisii
ENSELUG00000017544	lrrc47	98	70.951	ENSSMAG00000009344	lrrc47	100	70.951	Scophthalmus_maximus
ENSELUG00000017544	lrrc47	98	73.192	ENSSDUG00000014618	lrrc47	100	72.310	Seriola_dumerili
ENSELUG00000017544	lrrc47	98	72.840	ENSSLDG00000018908	lrrc47	100	71.958	Seriola_lalandi_dorsalis
ENSELUG00000017544	lrrc47	97	49.745	ENSSPUG00000010277	LRRC47	99	49.414	Sphenodon_punctatus
ENSELUG00000017544	lrrc47	98	70.899	ENSSPAG00000005188	lrrc47	100	71.076	Stegastes_partitus
ENSELUG00000017544	lrrc47	98	51.531	ENSSSCG00000039516	LRRC47	99	51.361	Sus_scrofa
ENSELUG00000017544	lrrc47	70	59.158	ENSTGUG00000002737	LRRC47	98	59.158	Taeniopygia_guttata
ENSELUG00000017544	lrrc47	98	68.430	ENSTRUG00000017696	lrrc47	100	67.549	Takifugu_rubripes
ENSELUG00000017544	lrrc47	98	67.430	ENSTNIG00000010923	lrrc47	99	66.021	Tetraodon_nigroviridis
ENSELUG00000017544	lrrc47	98	49.746	ENSTTRG00000011751	LRRC47	99	49.408	Tursiops_truncatus
ENSELUG00000017544	lrrc47	88	52.652	ENSUAMG00000012080	LRRC47	98	52.652	Ursus_americanus
ENSELUG00000017544	lrrc47	66	58.462	ENSUMAG00000010781	LRRC47	81	58.462	Ursus_maritimus
ENSELUG00000017544	lrrc47	97	48.547	ENSVVUG00000027118	LRRC47	98	48.718	Vulpes_vulpes
ENSELUG00000017544	lrrc47	95	57.066	ENSXETG00000006029	lrrc47	97	56.506	Xenopus_tropicalis
ENSELUG00000017544	lrrc47	97	67.914	ENSXCOG00000002813	lrrc47	98	67.558	Xiphophorus_couchianus
ENSELUG00000017544	lrrc47	97	68.028	ENSXMAG00000019386	lrrc47	99	67.851	Xiphophorus_maculatus