EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000017551 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 7733 bases
Position: chrLG10:23808489-23816221
Accession: 105008066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000037794	RRM_1	PF00076.22	6.7e-23	1	2
ENSELUP00000037794	RRM_1	PF00076.22	6.7e-23	2	2
ENSELUP00000037802	RRM_1	PF00076.22	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000040375	-	990	XM_010867261	ENSELUP00000037794	329 (aa)	XP_010865563	-
ENSELUT00000027651	-	402	-	ENSELUP00000037802	133 (aa)	-	-

Gene Model

Click here to download ENSELUG00000017551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000017551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000017551	srsf4	93	57.971	ENSELUG00000020439	srsf5a	98	46.417
ENSELUG00000017551	srsf4	93	44.853	ENSELUG00000018267	pigs	66	42.077
ENSELUG00000017551	srsf4	51	39.744	ENSELUG00000018155	srsf7b	57	39.744
ENSELUG00000017551	srsf4	93	33.333	ENSELUG00000021669	srsf9	67	39.344
ENSELUG00000017551	srsf4	93	39.259	ENSELUG00000012644	SRSF9	67	36.413
ENSELUG00000017551	srsf4	95	64.706	ENSELUG00000024182	SRSF6	91	63.235
ENSELUG00000017551	srsf4	93	41.176	ENSELUG00000021646	srsf1a	65	40.984
ENSELUG00000017551	srsf4	92	58.209	ENSELUG00000019852	srsf5b	83	47.518
ENSELUG00000017551	srsf4	56	39.759	ENSELUG00000016922	srsf7a	56	39.744
ENSELUG00000017551	srsf4	95	63.636	ENSELUG00000013506	SRSF6	98	52.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000017551	srsf4	93	72.308	ENSG00000116350	SRSF4	56	88.000	Homo_sapiens
ENSELUG00000017551	srsf4	93	61.538	ENSAPOG00000023399	-	87	47.419	Acanthochromis_polyacanthus
ENSELUG00000017551	srsf4	93	75.385	ENSACIG00000018649	srsf4	90	73.643	Amphilophus_citrinellus
ENSELUG00000017551	srsf4	95	73.485	ENSAOCG00000005997	srsf4	92	77.841	Amphiprion_ocellaris
ENSELUG00000017551	srsf4	92	72.093	ENSATEG00000005680	srsf4	95	67.208	Anabas_testudineus
ENSELUG00000017551	srsf4	71	77.660	ENSAPLG00000006595	-	51	55.762	Anas_platyrhynchos
ENSELUG00000017551	srsf4	93	72.308	ENSANAG00000037134	SRSF4	63	56.146	Aotus_nancymaae
ENSELUG00000017551	srsf4	93	81.538	ENSACLG00000003395	srsf4	97	71.338	Astatotilapia_calliptera
ENSELUG00000017551	srsf4	93	67.692	ENSACLG00000021269	-	97	48.901	Astatotilapia_calliptera
ENSELUG00000017551	srsf4	93	72.308	ENSAMXG00000034811	srsf4	99	59.932	Astyanax_mexicanus
ENSELUG00000017551	srsf4	94	52.027	WBGene00004698	rsp-1	97	50.000	Caenorhabditis_elegans
ENSELUG00000017551	srsf4	93	72.308	ENSCJAG00000047192	SRSF4	52	56.146	Callithrix_jacchus
ENSELUG00000017551	srsf4	95	71.212	ENSCHIG00000022096	SRSF4	62	55.786	Capra_hircus
ENSELUG00000017551	srsf4	93	72.308	ENSCATG00000031440	SRSF4	62	55.046	Cercocebus_atys
ENSELUG00000017551	srsf4	71	75.532	ENSCHOG00000013858	SRSF4	50	55.849	Choloepus_hoffmanni
ENSELUG00000017551	srsf4	93	71.538	ENSCPBG00000009020	SRSF4	61	56.918	Chrysemys_picta_bellii
ENSELUG00000017551	srsf4	92	57.246	ENSCING00000020631	-	98	49.425	Ciona_intestinalis
ENSELUG00000017551	srsf4	92	54.861	ENSCING00000012370	-	68	56.784	Ciona_intestinalis
ENSELUG00000017551	srsf4	93	48.936	ENSCING00000024718	-	56	50.485	Ciona_intestinalis
ENSELUG00000017551	srsf4	96	50.365	ENSCING00000011362	-	65	53.226	Ciona_intestinalis
ENSELUG00000017551	srsf4	92	57.364	ENSCSAVG00000002581	-	70	54.271	Ciona_savignyi
ENSELUG00000017551	srsf4	93	72.308	ENSCGRG00001021115	Srsf4	53	56.146	Cricetulus_griseus_chok1gshd
ENSELUG00000017551	srsf4	93	83.846	ENSCSEG00000010058	srsf4	75	79.845	Cynoglossus_semilaevis
ENSELUG00000017551	srsf4	93	71.538	ENSDARG00000105293	srsf4	72	76.316	Danio_rerio
ENSELUG00000017551	srsf4	93	72.308	ENSDNOG00000047961	SRSF4	52	55.738	Dasypus_novemcinctus
ENSELUG00000017551	srsf4	93	72.308	ENSDORG00000002459	Srsf4	53	56.954	Dipodomys_ordii
ENSELUG00000017551	srsf4	92	58.462	FBgn0004587	B52	95	56.250	Drosophila_melanogaster
ENSELUG00000017551	srsf4	95	52.273	ENSEBUG00000001681	srsf4	67	54.974	Eptatretus_burgeri
ENSELUG00000017551	srsf4	74	61.616	ENSEBUG00000003129	srsf4	63	61.146	Eptatretus_burgeri
ENSELUG00000017551	srsf4	93	72.308	ENSEASG00005010168	SRSF4	52	56.146	Equus_asinus_asinus
ENSELUG00000017551	srsf4	93	72.308	ENSECAG00000021350	SRSF4	52	56.146	Equus_caballus
ENSELUG00000017551	srsf4	93	70.769	ENSFALG00000001346	SRSF4	55	55.410	Ficedula_albicollis
ENSELUG00000017551	srsf4	71	78.723	ENSFDAG00000007332	SRSF4	50	57.358	Fukomys_damarensis
ENSELUG00000017551	srsf4	93	75.385	ENSFHEG00000007472	srsf4	82	81.579	Fundulus_heteroclitus
ENSELUG00000017551	srsf4	93	74.615	ENSGMOG00000012906	srsf4	57	77.835	Gadus_morhua
ENSELUG00000017551	srsf4	93	71.538	ENSGALG00000050314	SRSF4	55	55.738	Gallus_gallus
ENSELUG00000017551	srsf4	93	77.099	ENSGAFG00000018496	srsf4	98	65.886	Gambusia_affinis
ENSELUG00000017551	srsf4	95	75.000	ENSGACG00000002389	srsf4	56	76.804	Gasterosteus_aculeatus
ENSELUG00000017551	srsf4	93	71.538	ENSGAGG00000014836	SRSF4	61	56.918	Gopherus_agassizii
ENSELUG00000017551	srsf4	93	72.308	ENSGGOG00000002444	SRSF4	53	55.921	Gorilla_gorilla
ENSELUG00000017551	srsf4	93	67.692	ENSHBUG00000011326	-	77	51.592	Haplochromis_burtoni
ENSELUG00000017551	srsf4	61	80.460	ENSHBUG00000016897	-	79	80.460	Haplochromis_burtoni
ENSELUG00000017551	srsf4	93	72.308	ENSHGLG00000011842	SRSF4	53	55.921	Heterocephalus_glaber_female
ENSELUG00000017551	srsf4	93	72.308	ENSHGLG00100017279	SRSF4	53	55.921	Heterocephalus_glaber_male
ENSELUG00000017551	srsf4	93	77.519	ENSHCOG00000012540	srsf4	96	60.596	Hippocampus_comes
ENSELUG00000017551	srsf4	93	72.308	ENSSTOG00000015908	SRSF4	53	56.146	Ictidomys_tridecemlineatus
ENSELUG00000017551	srsf4	93	77.099	ENSKMAG00000013631	srsf4	94	58.278	Kryptolebias_marmoratus
ENSELUG00000017551	srsf4	50	80.822	ENSLBEG00000017163	-	70	81.579	Labrus_bergylta
ENSELUG00000017551	srsf4	93	63.846	ENSLOCG00000001442	-	73	52.288	Lepisosteus_oculatus
ENSELUG00000017551	srsf4	93	72.308	ENSLAFG00000002575	SRSF4	61	55.738	Loxodonta_africana
ENSELUG00000017551	srsf4	95	77.273	ENSMAMG00000004888	srsf4	100	61.513	Mastacembelus_armatus
ENSELUG00000017551	srsf4	93	81.538	ENSMZEG00005026275	srsf4	97	71.338	Maylandia_zebra
ENSELUG00000017551	srsf4	61	80.460	ENSMZEG00005025078	-	78	80.460	Maylandia_zebra
ENSELUG00000017551	srsf4	93	71.538	ENSMGAG00000002400	SRSF4	55	55.738	Meleagris_gallopavo
ENSELUG00000017551	srsf4	93	72.308	ENSMAUG00000021940	Srsf4	54	55.738	Mesocricetus_auratus
ENSELUG00000017551	srsf4	93	72.308	ENSMICG00000043567	SRSF4	52	56.146	Microcebus_murinus
ENSELUG00000017551	srsf4	93	72.308	ENSMOCG00000013319	Srsf4	53	56.146	Microtus_ochrogaster
ENSELUG00000017551	srsf4	93	73.846	ENSMMOG00000013653	srsf4	81	75.000	Mola_mola
ENSELUG00000017551	srsf4	95	71.212	ENSMODG00000011052	SRSF4	82	56.721	Monodelphis_domestica
ENSELUG00000017551	srsf4	95	74.242	ENSMALG00000013392	srsf4	99	62.914	Monopterus_albus
ENSELUG00000017551	srsf4	60	58.140	ENSMALG00000010062	-	81	61.333	Monopterus_albus
ENSELUG00000017551	srsf4	93	72.308	MGP_CAROLIEiJ_G0026555	Srsf4	53	56.146	Mus_caroli
ENSELUG00000017551	srsf4	93	72.308	ENSMUSG00000028911	Srsf4	53	56.146	Mus_musculus
ENSELUG00000017551	srsf4	93	72.308	MGP_PahariEiJ_G0028887	Srsf4	53	56.146	Mus_pahari
ENSELUG00000017551	srsf4	93	72.308	MGP_SPRETEiJ_G0027535	Srsf4	53	56.146	Mus_spretus
ENSELUG00000017551	srsf4	93	72.308	ENSMPUG00000015470	SRSF4	52	56.146	Mustela_putorius_furo
ENSELUG00000017551	srsf4	91	72.441	ENSMLUG00000014770	SRSF4	51	56.040	Myotis_lucifugus
ENSELUG00000017551	srsf4	93	72.308	ENSNGAG00000012225	Srsf4	54	56.146	Nannospalax_galili
ENSELUG00000017551	srsf4	61	80.460	ENSNBRG00000014840	-	81	80.460	Neolamprologus_brichardi
ENSELUG00000017551	srsf4	95	52.672	ENSNLEG00000030787	-	99	50.331	Nomascus_leucogenys
ENSELUG00000017551	srsf4	93	71.538	ENSOPRG00000010098	SRSF4	53	55.814	Ochotona_princeps
ENSELUG00000017551	srsf4	93	72.308	ENSODEG00000003230	SRSF4	51	56.811	Octodon_degus
ENSELUG00000017551	srsf4	93	72.308	ENSOCUG00000001837	SRSF4	53	56.146	Oryctolagus_cuniculus
ENSELUG00000017551	srsf4	93	73.846	ENSORLG00020016052	srsf4	99	71.479	Oryzias_latipes_hni
ENSELUG00000017551	srsf4	93	73.846	ENSORLG00015007566	srsf4	100	62.914	Oryzias_latipes_hsok
ENSELUG00000017551	srsf4	93	73.846	ENSOMEG00000005541	srsf4	51	80.928	Oryzias_melastigma
ENSELUG00000017551	srsf4	93	72.308	ENSOGAG00000015515	SRSF4	53	56.146	Otolemur_garnettii
ENSELUG00000017551	srsf4	93	72.308	ENSPPAG00000028357	SRSF4	53	55.921	Pan_paniscus
ENSELUG00000017551	srsf4	93	72.308	ENSPTRG00000000445	SRSF4	53	55.921	Pan_troglodytes
ENSELUG00000017551	srsf4	97	76.471	ENSPMGG00000013436	srsf4	100	75.735	Periophthalmus_magnuspinnatus
ENSELUG00000017551	srsf4	71	78.723	ENSPEMG00000003365	Srsf4	59	58.007	Peromyscus_maniculatus_bairdii
ENSELUG00000017551	srsf4	93	62.308	ENSPMAG00000009397	srsf4	85	55.319	Petromyzon_marinus
ENSELUG00000017551	srsf4	95	75.940	ENSPFOG00000001306	srsf4	91	56.812	Poecilia_formosa
ENSELUG00000017551	srsf4	95	75.940	ENSPLAG00000008812	srsf4	93	63.758	Poecilia_latipinna
ENSELUG00000017551	srsf4	95	75.940	ENSPMEG00000023638	srsf4	53	74.619	Poecilia_mexicana
ENSELUG00000017551	srsf4	95	75.940	ENSPREG00000009639	srsf4	86	59.639	Poecilia_reticulata
ENSELUG00000017551	srsf4	93	72.308	ENSPCAG00000009879	SRSF4	53	56.146	Procavia_capensis
ENSELUG00000017551	srsf4	93	72.308	ENSPCOG00000027341	SRSF4	53	56.146	Propithecus_coquereli
ENSELUG00000017551	srsf4	93	76.154	ENSPNYG00000003796	srsf4	97	64.970	Pundamilia_nyererei
ENSELUG00000017551	srsf4	93	76.154	ENSPNAG00000023844	srsf4	54	77.320	Pygocentrus_nattereri
ENSELUG00000017551	srsf4	93	72.308	ENSRNOG00000010007	Srsf4	53	56.146	Rattus_norvegicus
ENSELUG00000017551	srsf4	93	72.308	ENSSBOG00000027098	SRSF4	52	56.146	Saimiri_boliviensis_boliviensis
ENSELUG00000017551	srsf4	71	78.723	ENSSHAG00000012407	SRSF4	77	56.981	Sarcophilus_harrisii
ENSELUG00000017551	srsf4	93	78.462	ENSSFOG00015020292	srsf4	100	58.663	Scleropages_formosus
ENSELUG00000017551	srsf4	93	73.846	ENSSDUG00000007387	srsf4	97	62.757	Seriola_dumerili
ENSELUG00000017551	srsf4	95	54.887	ENSSLDG00000009745	srsf4	96	54.575	Seriola_lalandi_dorsalis
ENSELUG00000017551	srsf4	93	70.769	ENSSPUG00000015318	-	54	55.814	Sphenodon_punctatus
ENSELUG00000017551	srsf4	58	69.880	ENSSPUG00000019124	-	85	69.737	Sphenodon_punctatus
ENSELUG00000017551	srsf4	95	75.000	ENSSPAG00000014538	srsf4	100	62.752	Stegastes_partitus
ENSELUG00000017551	srsf4	71	77.660	ENSTGUG00000000765	SRSF4	51	55.762	Taeniopygia_guttata
ENSELUG00000017551	srsf4	93	74.265	ENSTRUG00000011891	srsf4	97	70.130	Takifugu_rubripes
ENSELUG00000017551	srsf4	95	75.000	ENSTNIG00000005573	srsf4	70	76.289	Tetraodon_nigroviridis
ENSELUG00000017551	srsf4	93	77.099	ENSXCOG00000018826	srsf4	89	71.311	Xiphophorus_couchianus
ENSELUG00000017551	srsf4	93	66.165	ENSXCOG00000003212	-	55	67.876	Xiphophorus_couchianus
ENSELUG00000017551	srsf4	57	79.268	ENSXMAG00000021549	-	64	81.579	Xiphophorus_maculatus